FFCP PHASE1:Hg19::chr20:42143136..42143161,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:42143136..42143161,+
|short_description=p3@L3MBTL1
|description=CAGE_peak_3_at_L3MBTL1_5end
|association_with_transcript=-4bp_to_ENST00000373134_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26013 | |EntrezGene=26013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15905 | |HGNC=15905 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y468 | |UniProt=Q9Y468 | ||
|association_with_transcript=-4bp_to_ENST00000373134_5end | |||
|cluster_id=chr20:42143136..42143161,+ | |||
|description=CAGE_peak_3_at_L3MBTL1_5end | |||
|id=chr20:42143136..42143161,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.17e-10!53;CL:0000051!3.17e-10!53;CL:0000838!3.69e-10!52 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.18e-07;53!CL:0000236;1.57e-07;13!CL:0000791;1.84e-07;18!CL:0000789;1.84e-07;18!CL:0002419;1.84e-07;18!CL:0000084;7.89e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.64e-10,52;CL:0000542,6.66e-10,53;CL:0000051,6.66e-10,53;CL:0000236,1.38e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.18e-07;53!CL:0000790;1.84e-07;18 | |||
|ontology_enrichment_disease=DOID:162!6.46e-08!235;DOID:14566!3.10e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.17e-09,235;DOID:14566,1.33e-08,239;DOID:305,7.34e-08,106;DOID:0050687,4.35e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.41e-11!57;UBERON:0005068!8.41e-11!57;UBERON:0006241!8.41e-11!57;UBERON:0007135!8.41e-11!57;UBERON:0002780!1.66e-09!41;UBERON:0001890!1.66e-09!41;UBERON:0006240!1.66e-09!41;UBERON:0003080!1.89e-09!42;UBERON:0007023!4.42e-09!115;UBERON:0002616!2.66e-08!59;UBERON:0003056!3.52e-08!61;UBERON:0001893!6.43e-08!34;UBERON:0002346!7.08e-08!90;UBERON:0000955!7.90e-08!69;UBERON:0006238!7.90e-08!69;UBERON:0002020!1.02e-07!34;UBERON:0003528!1.02e-07!34;UBERON:0002791!1.03e-07!33;UBERON:0003075!1.72e-07!86;UBERON:0007284!1.72e-07!86;UBERON:0001869!6.85e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.93e-09;41!UBERON:0001890;3.93e-09;41!UBERON:0000073;4.68e-08;53!UBERON:0002616;4.68e-08;53!UBERON:0001893;4.25e-07;34!UBERON:0003528;8.64e-07;34!UBERON:0002020;8.64e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.56e-12,56;UBERON:0005068,2.56e-12,56;UBERON:0006241,2.56e-12,56;UBERON:0007135,2.56e-12,56;UBERON:0000073,9.88e-12,53;UBERON:0002616,9.88e-12,53;UBERON:0002780,4.68e-11,41;UBERON:0001890,4.68e-11,41;UBERON:0003080,4.68e-11,41;UBERON:0006240,4.68e-11,41;UBERON:0003056,3.54e-09,61;UBERON:0002346,3.55e-09,86;UBERON:0003075,5.78e-09,82;UBERON:0007284,5.78e-09,82;UBERON:0001893,2.00e-08,34;UBERON:0003528,3.56e-08,34;UBERON:0002020,3.56e-08,34;UBERON:0000955,3.67e-08,68;UBERON:0006238,3.67e-08,68;UBERON:0002791,1.77e-07,32;UBERON:0001016,2.95e-07,89;UBERON:0001869,4.38e-07,32 | |||
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| ||
|short_description=p3@L3MBTL1 | |||
}} | }} |
Latest revision as of 06:43, 16 September 2015
Short description: | p3@L3MBTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_L3MBTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000373134_5end |
EntrezGene: | L3MBTL1 |
HGNC: | 15905 |
UniProt: | Q9Y468 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.64e-10 | 52 |
lymphocyte | 6.66e-10 | 53 |
common lymphoid progenitor | 6.66e-10 | 53 |
B cell | 1.38e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.56e-12 | 56 |
neural rod | 2.56e-12 | 56 |
future spinal cord | 2.56e-12 | 56 |
neural keel | 2.56e-12 | 56 |
regional part of nervous system | 9.88e-12 | 53 |
regional part of brain | 9.88e-12 | 53 |
regional part of forebrain | 4.68e-11 | 41 |
forebrain | 4.68e-11 | 41 |
anterior neural tube | 4.68e-11 | 41 |
future forebrain | 4.68e-11 | 41 |
pre-chordal neural plate | 3.54e-09 | 61 |
neurectoderm | 3.55e-09 | 86 |
neural plate | 5.78e-09 | 82 |
presumptive neural plate | 5.78e-09 | 82 |
telencephalon | 2.00e-08 | 34 |
brain grey matter | 3.56e-08 | 34 |
gray matter | 3.56e-08 | 34 |
brain | 3.67e-08 | 68 |
future brain | 3.67e-08 | 68 |
regional part of telencephalon | 1.77e-07 | 32 |
nervous system | 2.95e-07 | 89 |
cerebral hemisphere | 4.38e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.17e-09 | 235 |
disease of cellular proliferation | 1.33e-08 | 239 |
carcinoma | 7.34e-08 | 106 |
cell type cancer | 4.35e-07 | 143 |