FFCP PHASE1:Hg19::chr14:94844957..94844973,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=-71bp_to_M26123_5end | |association_with_transcript=-71bp_to_M26123_5end | ||
|cluster_id=chr14:94844957..94844973,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_24_at_SERPINA1_5end | |description=CAGE_peak_24_at_SERPINA1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.84e-55!42;CL:0000860!7.46e-51!45;CL:0000766!1.97e-43!76;CL:0002194!1.71e-41!63;CL:0000576!1.71e-41!63;CL:0000040!1.71e-41!63;CL:0000559!1.71e-41!63;CL:0002009!7.07e-40!65;CL:0000839!3.10e-36!70;CL:0000557!1.44e-35!71;CL:0000763!1.86e-25!112;CL:0000049!1.86e-25!112;CL:0000738!1.40e-22!140;CL:0002087!1.19e-21!119;CL:0002393!3.15e-18!9;CL:0002397!3.15e-18!9;CL:0002031!4.74e-18!124;CL:0000037!5.67e-16!172;CL:0000566!5.67e-16!172;CL:0002032!2.35e-15!165;CL:0000837!2.35e-15!165;CL:0000988!2.10e-14!182;CL:0000875!4.59e-07!3;CL:0002396!4.59e-07!3;CL:0000181!4.66e-07!12;CL:0000417!4.66e-07!12;CL:0000668!4.66e-07!12;CL:0000414!4.66e-07!12;CL:0000412!4.66e-07!12;CL:0000182!4.66e-07!12;CL:0000094!6.65e-07!8 | |ontology_enrichment_celltype=CL:0002057!2.84e-55!42;CL:0000860!7.46e-51!45;CL:0000766!1.97e-43!76;CL:0002194!1.71e-41!63;CL:0000576!1.71e-41!63;CL:0000040!1.71e-41!63;CL:0000559!1.71e-41!63;CL:0002009!7.07e-40!65;CL:0000839!3.10e-36!70;CL:0000557!1.44e-35!71;CL:0000763!1.86e-25!112;CL:0000049!1.86e-25!112;CL:0000738!1.40e-22!140;CL:0002087!1.19e-21!119;CL:0002393!3.15e-18!9;CL:0002397!3.15e-18!9;CL:0002031!4.74e-18!124;CL:0000037!5.67e-16!172;CL:0000566!5.67e-16!172;CL:0002032!2.35e-15!165;CL:0000837!2.35e-15!165;CL:0000988!2.10e-14!182;CL:0000875!4.59e-07!3;CL:0002396!4.59e-07!3;CL:0000181!4.66e-07!12;CL:0000417!4.66e-07!12;CL:0000668!4.66e-07!12;CL:0000414!4.66e-07!12;CL:0000412!4.66e-07!12;CL:0000182!4.66e-07!12;CL:0000094!6.65e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.20e-24;12!CL:0000860;6.77e-10;33!CL:0002057;6.77e-10;33!CL:0000473;2.44e-07;39!CL:0000234;2.44e-07;39 | |ontology_enrichment_celltype_v019=CL:0000182;2.20e-24;12!CL:0000860;6.77e-10;33!CL:0002057;6.77e-10;33!CL:0000473;2.44e-07;39!CL:0000234;2.44e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.16e-24,12;CL:0000860,6.52e-11,42;CL:0002057,6.52e-11,42;CL:0000473,2.03e-09,48;CL:0000234,2.03e-09,48;CL:0000766,3.36e-09,72;CL:0002194,2.51e-07,59;CL:0000576,2.51e-07,59;CL:0000040,2.51e-07,59;CL:0000559,2.51e-07,59;CL:0002009,4.66e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.42e-18;11!UBERON:0009497;1.07e-15;13!UBERON:0005754;2.08e-09;1!CL:0002057;3.51e-09;42!UBERON:0003104;4.25e-09;31 | |ontology_enrichment_development_v019=UBERON:0004161;1.42e-18;11!UBERON:0009497;1.07e-15;13!UBERON:0005754;2.08e-09;1!CL:0002057;3.51e-09;42!UBERON:0003104;4.25e-09;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.57e-33!115;UBERON:0002390!6.12e-32!102;UBERON:0003061!6.12e-32!102;UBERON:0002371!2.56e-30!80;UBERON:0002193!1.79e-29!112;UBERON:0001474!1.97e-27!86;UBERON:0004765!9.87e-22!101;UBERON:0001434!9.87e-22!101;UBERON:0003081!4.53e-10!216;UBERON:0002204!7.54e-10!167;UBERON:0009497!4.07e-09!25;UBERON:0000015!4.07e-09!25;UBERON:0002423!4.07e-09!25;UBERON:0006235!4.07e-09!25;UBERON:0004161!4.07e-09!25;UBERON:0008835!2.39e-07!22;UBERON:0003894!2.39e-07!22;UBERON:0002107!3.19e-07!19;UBERON:0006925!3.19e-07!19;UBERON:0008836!3.19e-07!19;UBERON:0006947!3.26e-07!3;UBERON:0004054!3.26e-07!3;UBERON:0009854!6.07e-07!23 | |ontology_enrichment_uberon=UBERON:0002405!5.57e-33!115;UBERON:0002390!6.12e-32!102;UBERON:0003061!6.12e-32!102;UBERON:0002371!2.56e-30!80;UBERON:0002193!1.79e-29!112;UBERON:0001474!1.97e-27!86;UBERON:0004765!9.87e-22!101;UBERON:0001434!9.87e-22!101;UBERON:0003081!4.53e-10!216;UBERON:0002204!7.54e-10!167;UBERON:0009497!4.07e-09!25;UBERON:0000015!4.07e-09!25;UBERON:0002423!4.07e-09!25;UBERON:0006235!4.07e-09!25;UBERON:0004161!4.07e-09!25;UBERON:0008835!2.39e-07!22;UBERON:0003894!2.39e-07!22;UBERON:0002107!3.19e-07!19;UBERON:0006925!3.19e-07!19;UBERON:0008836!3.19e-07!19;UBERON:0006947!3.26e-07!3;UBERON:0004054!3.26e-07!3;UBERON:0009854!6.07e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.00e-27;19!UBERON:0006925;8.00e-27;19!UBERON:0002423;3.87e-20;25!UBERON:0002365;1.87e-15;31!UBERON:0002330;1.87e-15;31!UBERON:0002368;1.20e-13;33!UBERON:0000949;5.02e-10;43!UBERON:0000998;2.08e-09;1!UBERON:0006868;2.08e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0002107;8.00e-27;19!UBERON:0006925;8.00e-27;19!UBERON:0002423;3.87e-20;25!UBERON:0002365;1.87e-15;31!UBERON:0002330;1.87e-15;31!UBERON:0002368;1.20e-13;33!UBERON:0000949;5.02e-10;43!UBERON:0000998;2.08e-09;1!UBERON:0006868;2.08e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.88e-27,19;UBERON:0006925,7.88e-27,19;UBERON:0008836,7.88e-27,19;UBERON:0008835,4.95e-23,22;UBERON:0003894,4.95e-23,22;UBERON:0009854,5.51e-22,23;UBERON:0007499,3.83e-20,25;UBERON:0009497,3.83e-20,25;UBERON:0000015,3.83e-20,25;UBERON:0002423,3.83e-20,25;UBERON:0006235,3.83e-20,25;UBERON:0004161,3.83e-20,25;UBERON:0009856,2.50e-19,26;UBERON:0002365,4.86e-16,31;UBERON:0002330,4.86e-16,31;UBERON:0002368,4.40e-14,35;UBERON:0005172,4.99e-11,54;UBERON:0005173,4.99e-11,54;UBERON:0000949,1.04e-10,45;UBERON:0002530,5.60e-10,59;UBERON:0002417,8.65e-10,60;UBERON:0000916,8.65e-10,60;UBERON:0000998,2.16e-09,1;UBERON:0006868,2.16e-09,1;UBERON:0003929,9.63e-09,54 | |||
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|short_description=p24@SERPINA1 | |short_description=p24@SERPINA1 | ||
}} | }} |
Latest revision as of 17:47, 16 September 2015
Short description: | p24@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -71bp_to_M26123_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.16e-24 | 12 |
classical monocyte | 6.52e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.52e-11 | 42 |
defensive cell | 2.03e-09 | 48 |
phagocyte | 2.03e-09 | 48 |
myeloid leukocyte | 3.36e-09 | 72 |
monopoietic cell | 2.51e-07 | 59 |
monocyte | 2.51e-07 | 59 |
monoblast | 2.51e-07 | 59 |
promonocyte | 2.51e-07 | 59 |
macrophage dendritic cell progenitor | 4.66e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
liver | 7.88e-27 | 19 |
digestive gland | 7.88e-27 | 19 |
liver bud | 7.88e-27 | 19 |
hepatic diverticulum | 4.95e-23 | 22 |
liver primordium | 4.95e-23 | 22 |
digestive tract diverticulum | 5.51e-22 | 23 |
epithelial sac | 3.83e-20 | 25 |
epithelium of foregut-midgut junction | 3.83e-20 | 25 |
anatomical boundary | 3.83e-20 | 25 |
hepatobiliary system | 3.83e-20 | 25 |
foregut-midgut junction | 3.83e-20 | 25 |
septum transversum | 3.83e-20 | 25 |
sac | 2.50e-19 | 26 |
exocrine gland | 4.86e-16 | 31 |
exocrine system | 4.86e-16 | 31 |
endocrine gland | 4.40e-14 | 35 |
abdomen element | 4.99e-11 | 54 |
abdominal segment element | 4.99e-11 | 54 |
endocrine system | 1.04e-10 | 45 |
gland | 5.60e-10 | 59 |
abdominal segment of trunk | 8.65e-10 | 60 |
abdomen | 8.65e-10 | 60 |
seminal vesicle | 2.16e-09 | 1 |
seminal fluid secreting gland | 2.16e-09 | 1 |
gut epithelium | 9.63e-09 | 54 |