FFCP PHASE1:Hg19::chr8:17650822..17650856,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:17650822..17650856,- | |||
|description=CAGE_peak_at_chr8:17650822..17650856,- | |description=CAGE_peak_at_chr8:17650822..17650856,- | ||
|id=chr8:17650822..17650856,- | |id=chr8:17650822..17650856,- | ||
|ontology_enrichment_celltype=CL:0000066!3.13e-10!254;CL:0000223!6.18e-07!59 | |ontology_enrichment_celltype=CL:0000066!3.13e-10!254;CL:0000223!6.18e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000415;4.23e-08;2!CL:0002367;8.04e-08;2!CL:0002535;8.04e-08;2 | |ontology_enrichment_celltype_v019=CL:1000415;4.23e-08;2!CL:0002367;8.04e-08;2!CL:0002535;8.04e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.86e-09,253;CL:1000415,4.38e-08,2;CL:0002367,8.60e-08,2;CL:0002535,9.19e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.39e-21!106;DOID:0050687!3.20e-15!143;DOID:299!4.38e-12!25;DOID:3493!2.17e-08!2;DOID:4929!3.32e-08!2;DOID:1749!6.21e-08!14;DOID:162!5.71e-07!235 | |ontology_enrichment_disease=DOID:305!1.39e-21!106;DOID:0050687!3.20e-15!143;DOID:299!4.38e-12!25;DOID:3493!2.17e-08!2;DOID:4929!3.32e-08!2;DOID:1749!6.21e-08!14;DOID:162!5.71e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.56e-27;2!DOID:3111;2.41e-14;1!DOID:3603;2.41e-14;1!DOID:299;3.01e-13;25!DOID:4468;3.56e-08;2!DOID:4929;6.15e-08;2 | |ontology_enrichment_disease_v019=DOID:3493;2.56e-27;2!DOID:3111;2.41e-14;1!DOID:3603;2.41e-14;1!DOID:299;3.01e-13;25!DOID:4468;3.56e-08;2!DOID:4929;6.15e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,2.74e-27,2;DOID:3111,1.84e-14,1;DOID:3603,1.84e-14,1;DOID:305,6.44e-14,106;DOID:299,2.82e-13,25;DOID:0050687,5.59e-10,143;DOID:4468,3.56e-08,2;DOID:4929,5.74e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.77e-17!169;UBERON:0000925!8.77e-17!169;UBERON:0006595!8.77e-17!169;UBERON:0001007!3.04e-14!155;UBERON:0001555!3.04e-14!155;UBERON:0007026!3.04e-14!155;UBERON:0002294!8.98e-13!7;UBERON:0001173!8.98e-13!7;UBERON:0004912!8.98e-13!7;UBERON:0004921!3.01e-12!129;UBERON:0004185!3.01e-12!129;UBERON:0000077!4.00e-12!130;UBERON:0002394!6.64e-09!4;UBERON:0003928!6.64e-09!4;UBERON:0005911!4.32e-08!82;UBERON:0003127!4.39e-08!2;UBERON:0000344!7.48e-07!12;UBERON:0003929!9.22e-07!54 | |ontology_enrichment_uberon=UBERON:0004119!8.77e-17!169;UBERON:0000925!8.77e-17!169;UBERON:0006595!8.77e-17!169;UBERON:0001007!3.04e-14!155;UBERON:0001555!3.04e-14!155;UBERON:0007026!3.04e-14!155;UBERON:0002294!8.98e-13!7;UBERON:0001173!8.98e-13!7;UBERON:0004912!8.98e-13!7;UBERON:0004921!3.01e-12!129;UBERON:0004185!3.01e-12!129;UBERON:0000077!4.00e-12!130;UBERON:0002394!6.64e-09!4;UBERON:0003928!6.64e-09!4;UBERON:0005911!4.32e-08!82;UBERON:0003127!4.39e-08!2;UBERON:0000344!7.48e-07!12;UBERON:0003929!9.22e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;6.99e-18;7!UBERON:0001173;6.99e-18;7!UBERON:0004913;1.41e-14;1!UBERON:0003703;1.41e-14;1!UBERON:0001174;1.41e-14;1!UBERON:0004914;1.41e-14;1!UBERON:0002394;2.33e-14;4!UBERON:0003928;2.33e-14;4!UBERON:0006562;5.37e-08;2!UBERON:0003127;6.15e-08;2!UBERON:0006955;8.04e-08;2!UBERON:0005969;8.04e-08;2!UBERON:0004801;8.04e-08;2!UBERON:0003956;8.04e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002294;6.99e-18;7!UBERON:0001173;6.99e-18;7!UBERON:0004913;1.41e-14;1!UBERON:0003703;1.41e-14;1!UBERON:0001174;1.41e-14;1!UBERON:0004914;1.41e-14;1!UBERON:0002394;2.33e-14;4!UBERON:0003928;2.33e-14;4!UBERON:0006562;5.37e-08;2!UBERON:0003127;6.15e-08;2!UBERON:0006955;8.04e-08;2!UBERON:0005969;8.04e-08;2!UBERON:0004801;8.04e-08;2!UBERON:0003956;8.04e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.23e-14,1;UBERON:0003703,1.23e-14,1;UBERON:0001174,1.23e-14,1;UBERON:0004914,1.23e-14,1;UBERON:0002294,4.53e-14,9;UBERON:0001173,4.53e-14,9;UBERON:0004912,4.53e-14,9;UBERON:0002394,6.50e-10,6;UBERON:0003928,6.50e-10,6;UBERON:0003929,1.29e-08,54;UBERON:0003127,6.58e-08,2;UBERON:0005969,8.60e-08,2;UBERON:0003956,8.60e-08,2;UBERON:0006955,9.19e-08,2;UBERON:0004801,9.19e-08,2 | |||
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| ||
|short_description=p@chr8:17650822..17650856,- | |short_description=p@chr8:17650822..17650856,- | ||
}} | }} |
Latest revision as of 16:28, 31 July 2015
Short description: | p@chr8:17650822..17650856, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:17650822..17650856, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.86e-09 | 253 |
epithelial cell of gall bladder | 4.38e-08 | 2 |
trabecular meshwork cell | 8.60e-08 | 2 |
epithelial cell of cervix | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.23e-14 | 1 |
extrahepatic bile duct | 1.23e-14 | 1 |
common bile duct | 1.23e-14 | 1 |
duodenal papilla | 1.23e-14 | 1 |
biliary system | 4.53e-14 | 9 |
biliary tree | 4.53e-14 | 9 |
biliary bud | 4.53e-14 | 9 |
bile duct | 6.50e-10 | 6 |
digestive system duct | 6.50e-10 | 6 |
gut epithelium | 1.29e-08 | 54 |
open tracheal system trachea | 6.58e-08 | 2 |
reticulum trabeculare | 8.60e-08 | 2 |
aqueous drainage system | 8.60e-08 | 2 |
uterine epithelium | 9.19e-08 | 2 |
cervix epithelium | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.74e-27 | 2 |
cystadenocarcinoma | 1.84e-14 | 1 |
mucinous cystadenocarcinoma | 1.84e-14 | 1 |
carcinoma | 6.44e-14 | 106 |
adenocarcinoma | 2.82e-13 | 25 |
cell type cancer | 5.59e-10 | 143 |
clear cell adenocarcinoma | 3.56e-08 | 2 |
tubular adenocarcinoma | 5.74e-08 | 2 |