FFCP PHASE1:Hg19::chr14:61191049..61191080,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51804 | |EntrezGene=51804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10890 | |HGNC=10890 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2N2 | |UniProt=G3V2N2 | ||
|association_with_transcript=0bp_to_ENST00000556952_5end | |association_with_transcript=0bp_to_ENST00000556952_5end | ||
|cluster_id=chr14:61191049..61191080,- | |||
|description=CAGE_peak_2_at_SIX4_5end | |description=CAGE_peak_2_at_SIX4_5end | ||
|id=chr14:61191049..61191080,- | |id=chr14:61191049..61191080,- | ||
|ontology_enrichment_celltype=CL:0000055!2.58e-15!180;CL:0000066!3.12e-14!254;CL:0002321!4.82e-09!248;CL:0000220!1.99e-08!246;CL:0000057!2.42e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.58e-15!180;CL:0000066!3.12e-14!254;CL:0002321!4.82e-09!248;CL:0000220!1.99e-08!246;CL:0000057!2.42e-07!75 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.77e-10,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.39e-19!143;DOID:305!7.91e-19!106;DOID:14566!1.08e-11!239;DOID:162!1.16e-11!235 | |ontology_enrichment_disease=DOID:0050687!2.39e-19!143;DOID:305!7.91e-19!106;DOID:14566!1.08e-11!239;DOID:162!1.16e-11!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.20e-07;14 | |ontology_enrichment_disease_v019=DOID:1749;6.20e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.90e-17,106;DOID:0050687,1.29e-16,143;DOID:162,5.76e-10,235;DOID:14566,8.15e-10,239;DOID:1749,6.15e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.59e-15!365;UBERON:0000481!8.16e-15!347;UBERON:0002100!5.65e-11!216;UBERON:0003104!7.83e-11!238;UBERON:0009142!7.83e-11!238;UBERON:0001048!9.06e-10!168;UBERON:0000119!1.90e-09!312;UBERON:0001007!2.18e-09!155;UBERON:0001555!2.18e-09!155;UBERON:0007026!2.18e-09!155;UBERON:0004119!2.39e-09!169;UBERON:0000925!2.39e-09!169;UBERON:0006595!2.39e-09!169;UBERON:0000483!3.85e-09!309;UBERON:0003102!2.32e-08!95;UBERON:0005256!4.41e-08!143;UBERON:0001444!4.65e-08!48;UBERON:0000477!2.53e-07!286;UBERON:0000914!3.82e-07!83;UBERON:0002329!3.82e-07!83;UBERON:0003077!3.82e-07!83;UBERON:0003059!3.82e-07!83;UBERON:0007282!3.82e-07!83;UBERON:0009618!3.82e-07!83;UBERON:0007285!3.82e-07!83;UBERON:0000077!3.88e-07!130;UBERON:0000161!5.23e-07!35;UBERON:0000468!6.07e-07!659 | |ontology_enrichment_uberon=UBERON:0000475!1.59e-15!365;UBERON:0000481!8.16e-15!347;UBERON:0002100!5.65e-11!216;UBERON:0003104!7.83e-11!238;UBERON:0009142!7.83e-11!238;UBERON:0001048!9.06e-10!168;UBERON:0000119!1.90e-09!312;UBERON:0001007!2.18e-09!155;UBERON:0001555!2.18e-09!155;UBERON:0007026!2.18e-09!155;UBERON:0004119!2.39e-09!169;UBERON:0000925!2.39e-09!169;UBERON:0006595!2.39e-09!169;UBERON:0000483!3.85e-09!309;UBERON:0003102!2.32e-08!95;UBERON:0005256!4.41e-08!143;UBERON:0001444!4.65e-08!48;UBERON:0000477!2.53e-07!286;UBERON:0000914!3.82e-07!83;UBERON:0002329!3.82e-07!83;UBERON:0003077!3.82e-07!83;UBERON:0003059!3.82e-07!83;UBERON:0007282!3.82e-07!83;UBERON:0009618!3.82e-07!83;UBERON:0007285!3.82e-07!83;UBERON:0000077!3.88e-07!130;UBERON:0000161!5.23e-07!35;UBERON:0000468!6.07e-07!659 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,1.85e-07,36;UBERON:0004905,9.33e-07,8;UBERON:0000982,9.33e-07,8;UBERON:0004770,9.33e-07,8 | |||
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| ||
|short_description=p2@SIX4 | |short_description=p2@SIX4 | ||
}} | }} |
Latest revision as of 21:03, 24 September 2015
Short description: | p2@SIX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000556952_5end |
EntrezGene: | SIX4 |
HGNC: | 10890 |
UniProt: | G3V2N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.77e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
orifice | 1.85e-07 | 36 |
articulation | 9.33e-07 | 8 |
skeletal joint | 9.33e-07 | 8 |
articular system | 9.33e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.90e-17 | 106 |
cell type cancer | 1.29e-16 | 143 |
cancer | 5.76e-10 | 235 |
disease of cellular proliferation | 8.15e-10 | 239 |
squamous cell carcinoma | 6.15e-07 | 14 |