FFCP PHASE1:Hg19::chr17:79495397..79495408,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25794 | |EntrezGene=25794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3960 | |HGNC=3960 | ||
|TSSclassifier=strong | |||
|UniProt=A8MRA6,O14926 | |UniProt=A8MRA6,O14926 | ||
|association_with_transcript=-8bp_to_NM_001077182,NM_012418,uc010wuo.1,uc010wup.1_5end | |association_with_transcript=-8bp_to_NM_001077182,NM_012418,uc010wuo.1,uc010wup.1_5end | ||
|cluster_id=chr17:79495397..79495408,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_1_at_FSCN2_5end | |description=CAGE_peak_1_at_FSCN2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000415!3.35e-11!2 | |ontology_enrichment_celltype=CL:1000415!3.35e-11!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;3.79e-11;4!DOID:1325;6.39e-07;7!DOID:3904;6.39e-07;7 | |ontology_enrichment_disease_v019=DOID:5409;3.79e-11;4!DOID:1325;6.39e-07;7!DOID:3904;6.39e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,3.79e-11,4;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001905!8.98e-41!2;UBERON:0002757!8.98e-41!2;UBERON:0010134!8.98e-41!2;UBERON:0002784!8.98e-41!2;UBERON:0005408!8.98e-41!2;UBERON:0001899!8.98e-41!2;UBERON:0003296!5.72e-21!4;UBERON:0010133!5.72e-21!4;UBERON:0001301!6.31e-21!1;UBERON:0006834!7.72e-21!1;UBERON:0001894!2.00e-12!7;UBERON:0006222!2.00e-12!7;UBERON:0002110!6.78e-08!3;UBERON:0006242!6.78e-08!3;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3;UBERON:0004175!1.11e-07!25 | |ontology_enrichment_uberon=UBERON:0001905!8.98e-41!2;UBERON:0002757!8.98e-41!2;UBERON:0010134!8.98e-41!2;UBERON:0002784!8.98e-41!2;UBERON:0005408!8.98e-41!2;UBERON:0001899!8.98e-41!2;UBERON:0003296!5.72e-21!4;UBERON:0010133!5.72e-21!4;UBERON:0001301!6.31e-21!1;UBERON:0006834!7.72e-21!1;UBERON:0001894!2.00e-12!7;UBERON:0006222!2.00e-12!7;UBERON:0002110!6.78e-08!3;UBERON:0006242!6.78e-08!3;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3;UBERON:0004175!1.11e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.22e-79;2!UBERON:0002757;5.22e-79;2!UBERON:0010134;5.22e-79;2!UBERON:0005408;5.22e-79;2!UBERON:0001899;5.22e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0002784;3.31e-40;4!UBERON:0001894;1.61e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.26e-09;20!UBERON:0002104;1.27e-08;21!UBERON:0000020;5.87e-08;23!UBERON:0001032;1.15e-07;24!UBERON:0004456;1.15e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;5.22e-79;2!UBERON:0002757;5.22e-79;2!UBERON:0010134;5.22e-79;2!UBERON:0005408;5.22e-79;2!UBERON:0001899;5.22e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0002784;3.31e-40;4!UBERON:0001894;1.61e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.26e-09;20!UBERON:0002104;1.27e-08;21!UBERON:0000020;5.87e-08;23!UBERON:0001032;1.15e-07;24!UBERON:0004456;1.15e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.22e-79,2;UBERON:0002757,5.22e-79,2;UBERON:0010134,5.22e-79,2;UBERON:0005408,5.22e-79,2;UBERON:0001899,5.22e-79,2;UBERON:0003296,3.31e-40,4;UBERON:0010133,3.31e-40,4;UBERON:0002784,3.31e-40,4;UBERON:0001894,1.61e-23,7;UBERON:0006222,1.61e-23,7;UBERON:0000970,1.27e-08,21;UBERON:0002104,1.27e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.15e-07,24;UBERON:0001032,1.15e-07,24;UBERON:0004456,1.15e-07,24 | |||
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|short_description=p1@FSCN2 | |short_description=p1@FSCN2 | ||
}} | }} |
Latest revision as of 07:35, 18 September 2015
Short description: | p1@FSCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FSCN2_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -8bp_to_NM_001077182, NM_012418, uc010wuo.1, uc010wup.1_5end |
EntrezGene: | FSCN2 |
HGNC: | 3960 |
UniProt: | A8MRA6O14926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.22e-79 | 2 |
regional part of epithalamus | 5.22e-79 | 2 |
secretory circumventricular organ | 5.22e-79 | 2 |
circumventricular organ | 5.22e-79 | 2 |
epithalamus | 5.22e-79 | 2 |
gland of diencephalon | 3.31e-40 | 4 |
neuroendocrine gland | 3.31e-40 | 4 |
regional part of diencephalon | 3.31e-40 | 4 |
diencephalon | 1.61e-23 | 7 |
future diencephalon | 1.61e-23 | 7 |
eye | 1.27e-08 | 21 |
visual system | 1.27e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.15e-07 | 24 |
sensory system | 1.15e-07 | 24 |
entire sense organ system | 1.15e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.79e-11 | 4 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |