FFCP PHASE1:Hg19::chr5:134094461..134094489,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9879 | |EntrezGene=9879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18681 | |HGNC=18681 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJA6,F5GYY8,Q7L014 | |UniProt=D6RJA6,F5GYY8,Q7L014 | ||
|association_with_transcript=0bp_to_ENST00000452510,ENST00000507392,ENST00000537371,NM_014829,uc003kzv.1,uc003kzw.2_5end | |association_with_transcript=0bp_to_ENST00000452510,ENST00000507392,ENST00000537371,NM_014829,uc003kzv.1,uc003kzw.2_5end | ||
|cluster_id=chr5:134094461..134094489,+ | |||
|coexpression_cluster_id=C3037 | |coexpression_cluster_id=C3037 | ||
|description=CAGE_peak_1_at_DDX46_5end | |description=CAGE_peak_1_at_DDX46_5end | ||
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|ontology_enrichment_celltype=CL:0000037!4.54e-09!172;CL:0000566!4.54e-09!172;CL:0002032!9.51e-09!165;CL:0000837!9.51e-09!165;CL:0000988!9.28e-08!182 | |ontology_enrichment_celltype=CL:0000037!4.54e-09!172;CL:0000566!4.54e-09!172;CL:0002032!9.51e-09!165;CL:0000837!9.51e-09!165;CL:0000988!9.28e-08!182 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.11e-08,168;CL:0002032,6.41e-08,161;CL:0000837,6.41e-08,161;CL:0000988,2.69e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!5.77e-36!235;DOID:14566!2.44e-34!239;DOID:0050687!6.48e-23!143;DOID:305!2.70e-18!106;DOID:0050686!3.23e-17!137;DOID:2531!1.82e-12!51;DOID:0060083!1.82e-12!51;DOID:1240!7.08e-11!39;DOID:8692!1.67e-09!31;DOID:3095!9.17e-07!22;DOID:2994!9.17e-07!22 | |ontology_enrichment_disease=DOID:162!5.77e-36!235;DOID:14566!2.44e-34!239;DOID:0050687!6.48e-23!143;DOID:305!2.70e-18!106;DOID:0050686!3.23e-17!137;DOID:2531!1.82e-12!51;DOID:0060083!1.82e-12!51;DOID:1240!7.08e-11!39;DOID:8692!1.67e-09!31;DOID:3095!9.17e-07!22;DOID:2994!9.17e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.14e-09;31!DOID:1240;4.48e-09;39!DOID:2531;5.86e-08;51!DOID:0060083;5.86e-08;51!DOID:3095;8.91e-07;22!DOID:2994;8.91e-07;22 | |ontology_enrichment_disease_v019=DOID:8692;2.14e-09;31!DOID:1240;4.48e-09;39!DOID:2531;5.86e-08;51!DOID:0060083;5.86e-08;51!DOID:3095;8.91e-07;22!DOID:2994;8.91e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:162,5.77e-36,235;DOID:14566,2.44e-34,239;DOID:0050687,6.48e-23,143;DOID:305,2.70e-18,106;DOID:0050686,3.23e-17,137;DOID:2531,1.82e-12,51;DOID:0060083,1.82e-12,51;DOID:1240,7.08e-11,39;DOID:8692,1.67e-09,31;DOID:3095,9.17e-07,22;DOID:2994,9.17e-07,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@DDX46 | |short_description=p1@DDX46 | ||
}} | }} |
Latest revision as of 16:34, 24 September 2015
Short description: | p1@DDX46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX46_5end |
Coexpression cluster: | C3037_Mast_acute_osteosarcoma_hepatoblastoma_lung_Myoblast_salivary |
Association with transcript: | 0bp_to_ENST00000452510, ENST00000507392, ENST00000537371, NM_014829, uc003kzv.1, uc003kzw.2_5end |
EntrezGene: | DDX46 |
HGNC: | 18681 |
UniProt: | D6RJA6F5GYY8Q7L014 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.11e-08 | 168 |
hematopoietic oligopotent progenitor cell | 6.41e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.41e-08 | 161 |
hematopoietic cell | 2.69e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.77e-36 | 235 |
disease of cellular proliferation | 2.44e-34 | 239 |
cell type cancer | 6.48e-23 | 143 |
carcinoma | 2.70e-18 | 106 |
organ system cancer | 3.23e-17 | 137 |
hematologic cancer | 1.82e-12 | 51 |
immune system cancer | 1.82e-12 | 51 |
leukemia | 7.08e-11 | 39 |
myeloid leukemia | 1.67e-09 | 31 |
germ cell and embryonal cancer | 9.17e-07 | 22 |
germ cell cancer | 9.17e-07 | 22 |