FFCP PHASE1:Hg19::chr17:1090622..1090652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B3 | |UniProt=F5H8B3 | ||
|association_with_transcript=-6bp_to_ENST00000544583,NM_001159746,uc002fse.2_5end | |association_with_transcript=-6bp_to_ENST00000544583,NM_001159746,uc002fse.2_5end | ||
|cluster_id=chr17:1090622..1090652,- | |||
|coexpression_cluster_id=C2393 | |coexpression_cluster_id=C2393 | ||
|description=CAGE_peak_12_at_ABR_5end | |description=CAGE_peak_12_at_ABR_5end | ||
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|ontology_enrichment_celltype=CL:0000147!8.74e-09!14;CL:0000148!1.56e-08!10;CL:0000541!1.56e-08!10 | |ontology_enrichment_celltype=CL:0000147!8.74e-09!14;CL:0000148!1.56e-08!10;CL:0000541!1.56e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.40e-08;10!CL:0002567;4.53e-08;3 | |ontology_enrichment_celltype_v019=CL:0000148;1.40e-08;10!CL:0002567;4.53e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.77e-08,10;CL:0000541,1.77e-08,10;CL:0002567,5.41e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.31e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;7.31e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;1.31e-53;20!UBERON:0002619;1.17e-48;22!UBERON:0000956;1.16e-42;25!UBERON:0000203;1.16e-42;25!UBERON:0001869;1.12e-37;32!UBERON:0001893;3.50e-36;34!UBERON:0003528;4.58e-34;34!UBERON:0002020;4.58e-34;34!UBERON:0002791;1.28e-32;32!UBERON:0000200;4.80e-31;6!UBERON:0002780;1.47e-21;41!UBERON:0001890;1.47e-21;41!UBERON:0000073;2.44e-20;53!UBERON:0002616;2.44e-20;53!UBERON:0001872;8.66e-18;5!UBERON:0002021;9.03e-18;5!UBERON:0001870;1.87e-16;3!UBERON:0002298;2.05e-14;6!UBERON:0001017;1.42e-13;75!UBERON:0000955;2.04e-13;68!UBERON:0002702;1.75e-11;2!UBERON:0002771;5.50e-11;2!UBERON:0001016;3.71e-10;83!UBERON:0000988;2.97e-08;3!UBERON:0001896;7.77e-08;3!UBERON:0005290;7.77e-08;3!UBERON:0004151;1.32e-07;3!UBERON:0007023;2.68e-07;114!UBERON:0004733;3.03e-07;12!UBERON:0002028;3.03e-07;12!UBERON:0001871;4.13e-07;6!UBERON:0002902;5.89e-07;1!UBERON:0009899;5.89e-07;1!UBERON:0002581;6.58e-07;1!UBERON:0007190;7.14e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001950;1.31e-53;20!UBERON:0002619;1.17e-48;22!UBERON:0000956;1.16e-42;25!UBERON:0000203;1.16e-42;25!UBERON:0001869;1.12e-37;32!UBERON:0001893;3.50e-36;34!UBERON:0003528;4.58e-34;34!UBERON:0002020;4.58e-34;34!UBERON:0002791;1.28e-32;32!UBERON:0000200;4.80e-31;6!UBERON:0002780;1.47e-21;41!UBERON:0001890;1.47e-21;41!UBERON:0000073;2.44e-20;53!UBERON:0002616;2.44e-20;53!UBERON:0001872;8.66e-18;5!UBERON:0002021;9.03e-18;5!UBERON:0001870;1.87e-16;3!UBERON:0002298;2.05e-14;6!UBERON:0001017;1.42e-13;75!UBERON:0000955;2.04e-13;68!UBERON:0002702;1.75e-11;2!UBERON:0002771;5.50e-11;2!UBERON:0001016;3.71e-10;83!UBERON:0000988;2.97e-08;3!UBERON:0001896;7.77e-08;3!UBERON:0005290;7.77e-08;3!UBERON:0004151;1.32e-07;3!UBERON:0007023;2.68e-07;114!UBERON:0004733;3.03e-07;12!UBERON:0002028;3.03e-07;12!UBERON:0001871;4.13e-07;6!UBERON:0002902;5.89e-07;1!UBERON:0009899;5.89e-07;1!UBERON:0002581;6.58e-07;1!UBERON:0007190;7.14e-07;1 | ||
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|short_description=p12@ABR | |short_description=p12@ABR | ||
}} | }} |
Latest revision as of 15:42, 18 September 2015
Short description: | p12@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ABR_5end |
Coexpression cluster: | C2393_Melanocyte_pons_occipital_postcentral_parietal_paracentral_medulla |
Association with transcript: | -6bp_to_ENST00000544583, NM_001159746, uc002fse.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | F5H8B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.77e-08 | 10 |
melanoblast | 1.77e-08 | 10 |
light melanocyte | 5.41e-08 | 3 |