FFCP PHASE1:Hg19::chr15:74228129..74228140,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:74228129..74228140,+ | |||
|description=CAGE_peak_at_chr15:74228129..74228140,+ | |description=CAGE_peak_at_chr15:74228129..74228140,+ | ||
|id=chr15:74228129..74228140,+ | |id=chr15:74228129..74228140,+ | ||
|ontology_enrichment_celltype=CL:0000075!8.88e-15!27;CL:0000710!5.62e-14!20;CL:0000197!1.51e-12!6;CL:0000098!1.51e-12!6;CL:0002167!1.51e-12!6;CL:0002077!1.78e-08!33;CL:0002586!3.39e-07!3;CL:0000133!1.00e-06!59 | |ontology_enrichment_celltype=CL:0000075!8.88e-15!27;CL:0000710!5.62e-14!20;CL:0000197!1.51e-12!6;CL:0000098!1.51e-12!6;CL:0002167!1.51e-12!6;CL:0002077!1.78e-08!33;CL:0002586!3.39e-07!3;CL:0000133!1.00e-06!59 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.24e-18;3!CL:0002174;1.97e-14;1!CL:0002616;1.97e-14;1!CL:0000501;1.97e-14;1!CL:0000149;3.15e-14;4!CL:0000197;8.47e-10;6!CL:0000098;8.47e-10;6!CL:0002167;8.47e-10;6!CL:0000077;5.30e-07;19 | |ontology_enrichment_celltype_v019=CL:0002586;1.24e-18;3!CL:0002174;1.97e-14;1!CL:0002616;1.97e-14;1!CL:0000501;1.97e-14;1!CL:0000149;3.15e-14;4!CL:0000197;8.47e-10;6!CL:0000098;8.47e-10;6!CL:0002167;8.47e-10;6!CL:0000077;5.30e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.14e-18,3;CL:0002616,1.23e-14,1;CL:0002174,1.41e-14,1;CL:0000501,1.41e-14,1;CL:0000149,2.95e-14,4;CL:0000197,9.68e-10,6;CL:0000098,9.68e-10,6;CL:0002167,9.68e-10,6;CL:0000077,5.41e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.49e-19;3!UBERON:0005425;1.97e-14;1 | |ontology_enrichment_development_v019=UBERON:0003056;9.49e-19;3!UBERON:0005425;1.97e-14;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!1.94e-10!11;UBERON:0002104!2.26e-09!21;UBERON:0000970!4.75e-08!20;UBERON:0001032!7.06e-08!24;UBERON:0004456!7.06e-08!24;UBERON:0002200!1.20e-07!11;UBERON:0006876!1.20e-07!11;UBERON:0000966!2.33e-07!5;UBERON:0005388!2.33e-07!5;UBERON:0001802!2.33e-07!5;UBERON:0001781!3.39e-07!3;UBERON:0001782!3.39e-07!3;UBERON:0005424!3.39e-07!3;UBERON:0000019!5.30e-07!19;UBERON:0000047!5.30e-07!19;UBERON:0004088!5.30e-07!19;UBERON:0003072!5.30e-07!19;UBERON:0003071!5.30e-07!19;UBERON:0004128!5.30e-07!19 | |ontology_enrichment_uberon=UBERON:0007625!1.94e-10!11;UBERON:0002104!2.26e-09!21;UBERON:0000970!4.75e-08!20;UBERON:0001032!7.06e-08!24;UBERON:0004456!7.06e-08!24;UBERON:0002200!1.20e-07!11;UBERON:0006876!1.20e-07!11;UBERON:0000966!2.33e-07!5;UBERON:0005388!2.33e-07!5;UBERON:0001802!2.33e-07!5;UBERON:0001781!3.39e-07!3;UBERON:0001782!3.39e-07!3;UBERON:0005424!3.39e-07!3;UBERON:0000019!5.30e-07!19;UBERON:0000047!5.30e-07!19;UBERON:0004088!5.30e-07!19;UBERON:0003072!5.30e-07!19;UBERON:0003071!5.30e-07!19;UBERON:0004128!5.30e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.25e-24;5!UBERON:0005388;1.25e-24;5!UBERON:0001802;1.25e-24;5!UBERON:0001781;1.24e-18;3!UBERON:0001782;1.24e-18;3!UBERON:0002104;9.37e-16;21!UBERON:0000941;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0001032;8.68e-14;24!UBERON:0004456;8.68e-14;24!UBERON:0000019;1.76e-11;19!UBERON:0000047;1.76e-11;19!UBERON:0004088;1.76e-11;19!UBERON:0010230;1.76e-11;19!UBERON:0007625;2.07e-11;11!UBERON:0000970;6.40e-11;20!UBERON:0001456;2.06e-10;21!UBERON:0000020;1.58e-09;23!UBERON:0003714;7.27e-08;2!UBERON:0005162;7.27e-08;2!UBERON:0000122;7.27e-08;2!UBERON:0005406;7.27e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000966;1.25e-24;5!UBERON:0005388;1.25e-24;5!UBERON:0001802;1.25e-24;5!UBERON:0001781;1.24e-18;3!UBERON:0001782;1.24e-18;3!UBERON:0002104;9.37e-16;21!UBERON:0000941;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0001032;8.68e-14;24!UBERON:0004456;8.68e-14;24!UBERON:0000019;1.76e-11;19!UBERON:0000047;1.76e-11;19!UBERON:0004088;1.76e-11;19!UBERON:0010230;1.76e-11;19!UBERON:0007625;2.07e-11;11!UBERON:0000970;6.40e-11;20!UBERON:0001456;2.06e-10;21!UBERON:0000020;1.58e-09;23!UBERON:0003714;7.27e-08;2!UBERON:0005162;7.27e-08;2!UBERON:0000122;7.27e-08;2!UBERON:0005406;7.27e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.37e-35,6;UBERON:0005388,1.37e-35,6;UBERON:0001802,1.37e-35,6;UBERON:0001781,3.17e-30,4;UBERON:0001782,1.14e-18,3;UBERON:0005424,1.14e-18,3;UBERON:0000019,1.61e-16,20;UBERON:0000047,1.61e-16,20;UBERON:0010312,1.61e-16,20;UBERON:0004088,1.61e-16,20;UBERON:0010230,1.61e-16,20;UBERON:0003072,1.61e-16,20;UBERON:0004128,1.61e-16,20;UBERON:0003071,1.61e-16,20;UBERON:0000970,9.82e-16,21;UBERON:0002104,9.82e-16,21;UBERON:0001456,5.08e-15,22;UBERON:0000941,2.11e-14,1;UBERON:0001785,2.11e-14,1;UBERON:0002464,2.11e-14,1;UBERON:0004904,2.11e-14,1;UBERON:0001021,2.11e-14,1;UBERON:0003902,2.11e-14,1;UBERON:0005425,2.11e-14,1;UBERON:0000020,9.05e-14,24;UBERON:0001032,9.05e-14,24;UBERON:0004456,9.05e-14,24;UBERON:0007625,2.10e-11,11;UBERON:0005085,1.17e-10,31;UBERON:0005406,5.74e-08,2;UBERON:0003714,7.52e-08,2;UBERON:0005162,7.52e-08,2;UBERON:0000122,7.52e-08,2 | |||
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| ||
|short_description=p@chr15:74228129..74228140,+ | |short_description=p@chr15:74228129..74228140,+ | ||
}} | }} |
Latest revision as of 04:07, 25 July 2015
Short description: | p@chr15:74228129..74228140, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:74228129..74228140, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.14e-18 | 3 |
perirenal adipocyte cell | 1.23e-14 | 1 |
follicular cell of ovary | 1.41e-14 | 1 |
granulosa cell | 1.41e-14 | 1 |
visual pigment cell | 2.95e-14 | 4 |
receptor cell | 9.68e-10 | 6 |
sensory epithelial cell | 9.68e-10 | 6 |
olfactory epithelial cell | 9.68e-10 | 6 |
mesothelial cell | 5.41e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
retina | 1.37e-35 | 6 |
photoreceptor array | 1.37e-35 | 6 |
posterior segment of eyeball | 1.37e-35 | 6 |
layer of retina | 3.17e-30 | 4 |
pigmented layer of retina | 1.14e-18 | 3 |
presumptive retinal pigmented epithelium | 1.14e-18 | 3 |
camera-type eye | 1.61e-16 | 20 |
simple eye | 1.61e-16 | 20 |
immature eye | 1.61e-16 | 20 |
ocular region | 1.61e-16 | 20 |
eyeball of camera-type eye | 1.61e-16 | 20 |
optic cup | 1.61e-16 | 20 |
optic vesicle | 1.61e-16 | 20 |
eye primordium | 1.61e-16 | 20 |
eye | 9.82e-16 | 21 |
visual system | 9.82e-16 | 21 |
face | 5.08e-15 | 22 |
cranial nerve II | 2.11e-14 | 1 |
cranial nerve | 2.11e-14 | 1 |
nerve trunk | 2.11e-14 | 1 |
nerve connecting eye with brain | 2.11e-14 | 1 |
nerve | 2.11e-14 | 1 |
retinal neural layer | 2.11e-14 | 1 |
presumptive neural retina | 2.11e-14 | 1 |
sense organ | 9.05e-14 | 24 |
sensory system | 9.05e-14 | 24 |
entire sense organ system | 9.05e-14 | 24 |
pigment epithelium of eye | 2.10e-11 | 11 |
ectodermal placode | 1.17e-10 | 31 |
perirenal fat | 5.74e-08 | 2 |
neural tissue | 7.52e-08 | 2 |
multi cell component structure | 7.52e-08 | 2 |
neuron projection bundle | 7.52e-08 | 2 |