FFCP PHASE1:Hg19::chr8:65489787..65489796,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401463 | |EntrezGene=401463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000520834,NR_015374,uc003xvg.2_5end | |association_with_transcript=23bp_to_ENST00000520834,NR_015374,uc003xvg.2_5end | ||
|cluster_id=chr8:65489787..65489796,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_2_at_LOC401463_5end | |description=CAGE_peak_2_at_LOC401463_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!2.48e-66!42;CL:0000860!9.20e-62!45;CL:0002194!9.35e-43!63;CL:0000576!9.35e-43!63;CL:0000040!9.35e-43!63;CL:0000559!9.35e-43!63;CL:0002009!2.17e-41!65;CL:0000839!2.59e-38!70;CL:0000557!9.52e-38!71;CL:0000766!3.82e-35!76;CL:0002087!1.81e-27!119;CL:0002031!2.87e-26!124;CL:0000763!3.48e-23!112;CL:0000049!3.48e-23!112;CL:0000738!5.34e-23!140;CL:0002032!3.80e-19!165;CL:0000837!3.80e-19!165;CL:0000037!2.89e-18!172;CL:0000566!2.89e-18!172;CL:0000988!4.01e-17!182;CL:0000134!2.31e-07!358;CL:0002320!3.64e-07!365 | |ontology_enrichment_celltype=CL:0002057!2.48e-66!42;CL:0000860!9.20e-62!45;CL:0002194!9.35e-43!63;CL:0000576!9.35e-43!63;CL:0000040!9.35e-43!63;CL:0000559!9.35e-43!63;CL:0002009!2.17e-41!65;CL:0000839!2.59e-38!70;CL:0000557!9.52e-38!71;CL:0000766!3.82e-35!76;CL:0002087!1.81e-27!119;CL:0002031!2.87e-26!124;CL:0000763!3.48e-23!112;CL:0000049!3.48e-23!112;CL:0000738!5.34e-23!140;CL:0002032!3.80e-19!165;CL:0000837!3.80e-19!165;CL:0000037!2.89e-18!172;CL:0000566!2.89e-18!172;CL:0000988!4.01e-17!182;CL:0000134!2.31e-07!358;CL:0002320!3.64e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.29e-43;33!CL:0002057;3.29e-43;33!CL:0000473;2.91e-30;39!CL:0000234;2.91e-30;39!CL:0000576;2.54e-19;48!CL:0000766;9.71e-18;69!CL:0002087;7.03e-12;104!CL:0000763;2.87e-11;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.29e-43;33!CL:0002057;3.29e-43;33!CL:0000473;2.91e-30;39!CL:0000234;2.91e-30;39!CL:0000576;2.54e-19;48!CL:0000766;9.71e-18;69!CL:0002087;7.03e-12;104!CL:0000763;2.87e-11;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-46,42;CL:0002057,1.65e-46,42;CL:0000473,1.12e-40,48;CL:0000234,1.12e-40,48;CL:0002194,1.68e-32,59;CL:0000576,1.68e-32,59;CL:0000040,1.68e-32,59;CL:0000559,1.68e-32,59;CL:0002009,1.91e-31,61;CL:0000839,4.41e-29,66;CL:0000557,1.19e-28,67;CL:0000766,1.14e-26,72;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002087,1.17e-16,115;CL:0002031,5.91e-16,120;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.24e-30;42 | |ontology_enrichment_development_v019=CL:0002057;8.24e-30;42 | ||
|ontology_enrichment_disease=DOID:4960!4.91e-11!1;DOID:0070004!4.91e-11!1 | |ontology_enrichment_disease=DOID:4960!4.91e-11!1;DOID:0070004!4.91e-11!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.84e-37!80;UBERON:0001474!1.03e-34!86;UBERON:0004765!9.56e-33!101;UBERON:0001434!9.56e-33!101;UBERON:0002390!6.09e-29!102;UBERON:0003061!6.09e-29!102;UBERON:0002193!3.67e-26!112;UBERON:0002405!2.02e-25!115;UBERON:0002204!6.99e-19!167;UBERON:0003081!2.21e-12!216;UBERON:0002384!6.76e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!1.84e-37!80;UBERON:0001474!1.03e-34!86;UBERON:0004765!9.56e-33!101;UBERON:0001434!9.56e-33!101;UBERON:0002390!6.09e-29!102;UBERON:0003061!6.09e-29!102;UBERON:0002193!3.67e-26!112;UBERON:0002405!2.02e-25!115;UBERON:0002204!6.99e-19!167;UBERON:0003081!2.21e-12!216;UBERON:0002384!6.76e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-25,76;UBERON:0001474,2.01e-23,82;UBERON:0004765,2.46e-21,90;UBERON:0002405,1.21e-20,93;UBERON:0002390,1.39e-19,98;UBERON:0003061,1.39e-19,98;UBERON:0001434,3.44e-19,100;UBERON:0002193,9.38e-18,108;UBERON:0002204,2.30e-11,167;UBERON:0003081,2.88e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,7.92915065694223,4.51839278508678,2.70852973188684,0,0.272906150057846,0,4.59125838556354,14.7627352455003,2.55734850319616,0,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0,0,2.42159801053347,5.52416453981347,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,7.92915065694223,4.51839278508678,2.70852973188684,0,0.272906150057846,0,4.59125838556354,14.7627352455003,2.55734850319616,0,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0,0,2.42159801053347,5.52416453981347,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LOC401463 | |short_description=p2@LOC401463 | ||
}} | }} |
Latest revision as of 19:16, 18 September 2015
Short description: | p2@LOC401463 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC401463_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 23bp_to_ENST00000520834, NR_015374, uc003xvg.2_5end |
EntrezGene: | LOC401463 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-46 | 42 |
defensive cell | 1.12e-40 | 48 |
phagocyte | 1.12e-40 | 48 |
monopoietic cell | 1.68e-32 | 59 |
monocyte | 1.68e-32 | 59 |
monoblast | 1.68e-32 | 59 |
promonocyte | 1.68e-32 | 59 |
macrophage dendritic cell progenitor | 1.91e-31 | 61 |
myeloid lineage restricted progenitor cell | 4.41e-29 | 66 |
granulocyte monocyte progenitor cell | 1.19e-28 | 67 |
myeloid leukocyte | 1.14e-26 | 72 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
nongranular leukocyte | 1.17e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.86e-25 | 76 |
bone element | 2.01e-23 | 82 |
skeletal element | 2.46e-21 | 90 |
immune system | 1.21e-20 | 93 |
hematopoietic system | 1.39e-19 | 98 |
blood island | 1.39e-19 | 98 |
skeletal system | 3.44e-19 | 100 |
hemolymphoid system | 9.38e-18 | 108 |
musculoskeletal system | 2.30e-11 | 167 |
lateral plate mesoderm | 2.88e-09 | 203 |