FFCP PHASE1:Hg19::chr1:175712561..175712572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7143 | |EntrezGene=7143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11953 | |HGNC=11953 | ||
|TSSclassifier=strong | |||
|UniProt=Q92752,A1L306 | |UniProt=Q92752,A1L306 | ||
|association_with_transcript=179bp_to_ENST00000263525,ENST00000367673,NM_003285,uc009wwu.1,uc010pmz.1_5end | |association_with_transcript=179bp_to_ENST00000263525,ENST00000367673,NM_003285,uc009wwu.1,uc010pmz.1_5end | ||
|cluster_id=chr1:175712561..175712572,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_TNR_5end | |description=CAGE_peak_3_at_TNR_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.79e-17;82!UBERON:0006215;1.13e-14;3!UBERON:0006241;1.14e-07;3!UBERON:0003057;1.14e-07;3!UBERON:0002532;5.52e-07;206!UBERON:0010316;5.52e-07;206 | |ontology_enrichment_development_v019=UBERON:0006601;1.79e-17;82!UBERON:0006215;1.13e-14;3!UBERON:0006241;1.14e-07;3!UBERON:0003057;1.14e-07;3!UBERON:0002532;5.52e-07;206!UBERON:0010316;5.52e-07;206 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.80e-108!57;UBERON:0005068!2.80e-108!57;UBERON:0006241!2.80e-108!57;UBERON:0007135!2.80e-108!57;UBERON:0002616!9.34e-90!59;UBERON:0001017!1.43e-85!82;UBERON:0000955!5.49e-82!69;UBERON:0006238!5.49e-82!69;UBERON:0005743!3.70e-81!86;UBERON:0000073!2.92e-79!94;UBERON:0001016!2.92e-79!94;UBERON:0002780!1.03e-78!41;UBERON:0001890!1.03e-78!41;UBERON:0006240!1.03e-78!41;UBERON:0003080!1.12e-76!42;UBERON:0002020!9.71e-74!34;UBERON:0003528!9.71e-74!34;UBERON:0001893!2.29e-73!34;UBERON:0003075!7.78e-72!86;UBERON:0007284!7.78e-72!86;UBERON:0002346!2.62e-71!90;UBERON:0002791!2.01e-70!33;UBERON:0001869!3.97e-67!32;UBERON:0002619!1.40e-59!22;UBERON:0001950!1.54e-53!20;UBERON:0000956!4.84e-52!25;UBERON:0000203!4.84e-52!25;UBERON:0007023!9.85e-52!115;UBERON:0003056!1.78e-50!61;UBERON:0000033!3.48e-44!123;UBERON:0000153!1.18e-41!129;UBERON:0007811!1.18e-41!129;UBERON:0000924!3.74e-40!173;UBERON:0006601!3.74e-40!173;UBERON:0004121!1.48e-39!169;UBERON:0003076!5.57e-31!15;UBERON:0003057!5.57e-31!15;UBERON:0000025!9.83e-29!194;UBERON:0004732!3.12e-25!13;UBERON:0002308!1.01e-22!9;UBERON:0000125!1.01e-22!9;UBERON:0004733!3.76e-22!12;UBERON:0002028!3.76e-22!12;UBERON:0007277!3.76e-22!12;UBERON:0004111!6.17e-21!241;UBERON:0002298!1.07e-20!8;UBERON:0000200!4.87e-20!6;UBERON:0000477!6.98e-18!286;UBERON:0002420!3.27e-17!9;UBERON:0007245!3.27e-17!9;UBERON:0010009!3.27e-17!9;UBERON:0010011!3.27e-17!9;UBERON:0000454!3.27e-17!9;UBERON:0002021!5.36e-17!5;UBERON:0001872!2.60e-16!5;UBERON:0009663!2.96e-16!7;UBERON:0000483!1.21e-15!309;UBERON:0000119!2.20e-15!312;UBERON:0001871!7.45e-15!7;UBERON:0002680!8.85e-14!9;UBERON:0001895!8.85e-14!9;UBERON:0010092!8.85e-14!9;UBERON:0000064!1.05e-13!219;UBERON:0000369!4.23e-13!4;UBERON:0002435!4.23e-13!4;UBERON:0000204!4.23e-13!4;UBERON:0010082!4.23e-13!4;UBERON:0000988!8.17e-12!3;UBERON:0000349!2.29e-11!5;UBERON:0006331!2.48e-11!3;UBERON:0002240!5.41e-11!3;UBERON:0002771!6.62e-11!3;UBERON:0001896!7.83e-11!3;UBERON:0005290!7.83e-11!3;UBERON:0010096!7.83e-11!3;UBERON:0000475!8.63e-11!365;UBERON:0005383!6.10e-10!3;UBERON:0005382!6.10e-10!3;UBERON:0002148!2.07e-08!2;UBERON:0009662!2.07e-08!2;UBERON:0005162!2.30e-08!2;UBERON:0000122!2.30e-08!2;UBERON:0001870!5.86e-08!2;UBERON:0001897!5.86e-08!2;UBERON:0001894!9.14e-08!7;UBERON:0006222!9.14e-08!7;UBERON:0001954!1.19e-07!2;UBERON:0003022!1.19e-07!2;UBERON:0002421!1.19e-07!2;UBERON:0002600!1.19e-07!2;UBERON:0001873!3.19e-07!2;UBERON:0010122!3.19e-07!2;UBERON:0000062!4.56e-07!511;UBERON:0000481!6.68e-07!347;UBERON:0005174!9.66e-07!5;UBERON:0001137!9.66e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!2.80e-108!57;UBERON:0005068!2.80e-108!57;UBERON:0006241!2.80e-108!57;UBERON:0007135!2.80e-108!57;UBERON:0002616!9.34e-90!59;UBERON:0001017!1.43e-85!82;UBERON:0000955!5.49e-82!69;UBERON:0006238!5.49e-82!69;UBERON:0005743!3.70e-81!86;UBERON:0000073!2.92e-79!94;UBERON:0001016!2.92e-79!94;UBERON:0002780!1.03e-78!41;UBERON:0001890!1.03e-78!41;UBERON:0006240!1.03e-78!41;UBERON:0003080!1.12e-76!42;UBERON:0002020!9.71e-74!34;UBERON:0003528!9.71e-74!34;UBERON:0001893!2.29e-73!34;UBERON:0003075!7.78e-72!86;UBERON:0007284!7.78e-72!86;UBERON:0002346!2.62e-71!90;UBERON:0002791!2.01e-70!33;UBERON:0001869!3.97e-67!32;UBERON:0002619!1.40e-59!22;UBERON:0001950!1.54e-53!20;UBERON:0000956!4.84e-52!25;UBERON:0000203!4.84e-52!25;UBERON:0007023!9.85e-52!115;UBERON:0003056!1.78e-50!61;UBERON:0000033!3.48e-44!123;UBERON:0000153!1.18e-41!129;UBERON:0007811!1.18e-41!129;UBERON:0000924!3.74e-40!173;UBERON:0006601!3.74e-40!173;UBERON:0004121!1.48e-39!169;UBERON:0003076!5.57e-31!15;UBERON:0003057!5.57e-31!15;UBERON:0000025!9.83e-29!194;UBERON:0004732!3.12e-25!13;UBERON:0002308!1.01e-22!9;UBERON:0000125!1.01e-22!9;UBERON:0004733!3.76e-22!12;UBERON:0002028!3.76e-22!12;UBERON:0007277!3.76e-22!12;UBERON:0004111!6.17e-21!241;UBERON:0002298!1.07e-20!8;UBERON:0000200!4.87e-20!6;UBERON:0000477!6.98e-18!286;UBERON:0002420!3.27e-17!9;UBERON:0007245!3.27e-17!9;UBERON:0010009!3.27e-17!9;UBERON:0010011!3.27e-17!9;UBERON:0000454!3.27e-17!9;UBERON:0002021!5.36e-17!5;UBERON:0001872!2.60e-16!5;UBERON:0009663!2.96e-16!7;UBERON:0000483!1.21e-15!309;UBERON:0000119!2.20e-15!312;UBERON:0001871!7.45e-15!7;UBERON:0002680!8.85e-14!9;UBERON:0001895!8.85e-14!9;UBERON:0010092!8.85e-14!9;UBERON:0000064!1.05e-13!219;UBERON:0000369!4.23e-13!4;UBERON:0002435!4.23e-13!4;UBERON:0000204!4.23e-13!4;UBERON:0010082!4.23e-13!4;UBERON:0000988!8.17e-12!3;UBERON:0000349!2.29e-11!5;UBERON:0006331!2.48e-11!3;UBERON:0002240!5.41e-11!3;UBERON:0002771!6.62e-11!3;UBERON:0001896!7.83e-11!3;UBERON:0005290!7.83e-11!3;UBERON:0010096!7.83e-11!3;UBERON:0000475!8.63e-11!365;UBERON:0005383!6.10e-10!3;UBERON:0005382!6.10e-10!3;UBERON:0002148!2.07e-08!2;UBERON:0009662!2.07e-08!2;UBERON:0005162!2.30e-08!2;UBERON:0000122!2.30e-08!2;UBERON:0001870!5.86e-08!2;UBERON:0001897!5.86e-08!2;UBERON:0001894!9.14e-08!7;UBERON:0006222!9.14e-08!7;UBERON:0001954!1.19e-07!2;UBERON:0003022!1.19e-07!2;UBERON:0002421!1.19e-07!2;UBERON:0002600!1.19e-07!2;UBERON:0001873!3.19e-07!2;UBERON:0010122!3.19e-07!2;UBERON:0000062!4.56e-07!511;UBERON:0000481!6.68e-07!347;UBERON:0005174!9.66e-07!5;UBERON:0001137!9.66e-07!5 | ||
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|short_description=p3@TNR | |short_description=p3@TNR | ||
}} | }} |
Latest revision as of 19:56, 18 September 2015
Short description: | p3@TNR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNR_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 179bp_to_ENST00000263525, ENST00000367673, NM_003285, uc009wwu.1, uc010pmz.1_5end |
EntrezGene: | TNR |
HGNC: | 11953 |
UniProt: | Q92752A1L306 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data