FFCP PHASE1:Hg19::chr17:73874625..73874640,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91107 | |EntrezGene=91107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19020 | |HGNC=19020 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LD4 | |UniProt=Q96LD4 | ||
|association_with_transcript=15bp_to_ENST00000254816,NM_033452,uc002jpw.2_5end | |association_with_transcript=15bp_to_ENST00000254816,NM_033452,uc002jpw.2_5end | ||
|cluster_id=chr17:73874625..73874640,- | |||
|coexpression_cluster_id=C3678 | |coexpression_cluster_id=C3678 | ||
|description=CAGE_peak_3_at_TRIM47_5end | |description=CAGE_peak_3_at_TRIM47_5end | ||
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|ontology_enrichment_celltype=CL:0002078!3.61e-15!44;CL:0000115!3.71e-15!35;CL:0000213!4.31e-15!57;CL:0000215!4.31e-15!57;CL:0002139!1.39e-12!24;CL:0000071!1.26e-09!18;CL:0002546!1.26e-09!18;CL:0000220!2.69e-08!246;CL:0000066!4.81e-08!254;CL:0002321!6.92e-08!248;CL:0000222!2.71e-07!119 | |ontology_enrichment_celltype=CL:0002078!3.61e-15!44;CL:0000115!3.71e-15!35;CL:0000213!4.31e-15!57;CL:0000215!4.31e-15!57;CL:0002139!1.39e-12!24;CL:0000071!1.26e-09!18;CL:0002546!1.26e-09!18;CL:0000220!2.69e-08!246;CL:0000066!4.81e-08!254;CL:0002321!6.92e-08!248;CL:0000222!2.71e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000115;6.68e-19;36!CL:0002139;5.26e-17;24!CL:0002078;2.66e-14;45!CL:0000071;5.92e-13;18!CL:0000213;5.02e-11;58!CL:0000215;5.02e-11;58!CL:1000413;6.30e-08;9 | |ontology_enrichment_celltype_v019=CL:0000115;6.68e-19;36!CL:0002139;5.26e-17;24!CL:0002078;2.66e-14;45!CL:0000071;5.92e-13;18!CL:0000213;5.02e-11;58!CL:0000215;5.02e-11;58!CL:1000413;6.30e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.38e-22,36;CL:0002078,8.44e-21,45;CL:0000213,2.70e-20,58;CL:0000215,2.70e-20,58;CL:0002139,3.07e-17,24;CL:0000071,4.94e-13,18;CL:0002546,4.94e-13,18;CL:1000413,5.96e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;5.92e-13;18 | |ontology_enrichment_development_v019=CL:0002546;5.92e-13;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;5.92e-13;18!UBERON:0001986;5.92e-13;18!UBERON:0004852;5.92e-13;18!UBERON:0006914;1.44e-11;25!UBERON:0000487;1.55e-10;22!UBERON:0003528;2.25e-10;34!UBERON:0002020;2.25e-10;34!UBERON:0002791;4.38e-10;32!UBERON:0001893;6.51e-10;34!UBERON:0002780;2.54e-09;41!UBERON:0001890;2.54e-09;41!UBERON:0001869;3.61e-09;32!UBERON:0000073;9.76e-09;53!UBERON:0002616;9.76e-09;53!UBERON:0003915;6.30e-08;9!UBERON:0004700;6.30e-08;9!UBERON:0001917;6.30e-08;9!UBERON:0000125;7.76e-08;9!UBERON:0002308;7.76e-08;9!UBERON:0001017;6.82e-07;75!UBERON:0000956;7.44e-07;25!UBERON:0000203;7.44e-07;25!UBERON:0000955;7.94e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0004638;5.92e-13;18!UBERON:0001986;5.92e-13;18!UBERON:0004852;5.92e-13;18!UBERON:0006914;1.44e-11;25!UBERON:0000487;1.55e-10;22!UBERON:0003528;2.25e-10;34!UBERON:0002020;2.25e-10;34!UBERON:0002791;4.38e-10;32!UBERON:0001893;6.51e-10;34!UBERON:0002780;2.54e-09;41!UBERON:0001890;2.54e-09;41!UBERON:0001869;3.61e-09;32!UBERON:0000073;9.76e-09;53!UBERON:0002616;9.76e-09;53!UBERON:0003915;6.30e-08;9!UBERON:0004700;6.30e-08;9!UBERON:0001917;6.30e-08;9!UBERON:0000125;7.76e-08;9!UBERON:0002308;7.76e-08;9!UBERON:0001017;6.82e-07;75!UBERON:0000956;7.44e-07;25!UBERON:0000203;7.44e-07;25!UBERON:0000955;7.94e-07;68 | ||
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|short_description=p3@TRIM47 | |short_description=p3@TRIM47 | ||
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Latest revision as of 13:10, 17 September 2015
Short description: | p3@TRIM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM47_5end |
Coexpression cluster: | C3678_Mast_Mesenchymal_Renal_breast_Synoviocyte_myeloma_CD14 |
Association with transcript: | 15bp_to_ENST00000254816, NM_033452, uc002jpw.2_5end |
EntrezGene: | TRIM47 |
HGNC: | 19020 |
UniProt: | Q96LD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.38e-22 | 36 |
meso-epithelial cell | 8.44e-21 | 45 |
lining cell | 2.70e-20 | 58 |
barrier cell | 2.70e-20 | 58 |
endothelial cell of vascular tree | 3.07e-17 | 24 |
blood vessel endothelial cell | 4.94e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.94e-13 | 18 |
endothelial cell of artery | 5.96e-08 | 9 |