FFCP PHASE1:Hg19::chr1:2345260..2345297,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5192 | |EntrezGene=5192 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8851 | |HGNC=8851 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000508384_5end | |association_with_transcript=-24bp_to_ENST00000508384_5end | ||
|cluster_id=chr1:2345260..2345297,- | |||
|description=CAGE_peak_2_at_PEX10_5end | |description=CAGE_peak_2_at_PEX10_5end | ||
|id=chr1:2345260..2345297,- | |id=chr1:2345260..2345297,- | ||
|ontology_enrichment_celltype=CL:0000066!8.38e-16!254;CL:0000148!3.87e-10!10;CL:0000541!3.87e-10!10;CL:0002077!5.66e-07!33;CL:0002322!6.60e-07!5 | |ontology_enrichment_celltype=CL:0000066!8.38e-16!254;CL:0000148!3.87e-10!10;CL:0000541!3.87e-10!10;CL:0002077!5.66e-07!33;CL:0002322!6.60e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000148;9.91e-34;10!CL:0000147;1.28e-23;14!CL:0002322;1.03e-20;5!CL:0000710;4.93e-16;20!CL:0000075;1.91e-11;27!CL:0002077;2.11e-10;34!CL:0002321;9.94e-07;15 | |ontology_enrichment_celltype_v019=CL:0000148;9.91e-34;10!CL:0000147;1.28e-23;14!CL:0002322;1.03e-20;5!CL:0000710;4.93e-16;20!CL:0000075;1.91e-11;27!CL:0002077;2.11e-10;34!CL:0002321;9.94e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.13e-33,10;CL:0000541,1.13e-33,10;CL:0000147,1.40e-23,14;CL:0002322,1.02e-20,5;CL:0000710,5.26e-16,20;CL:0000075,1.99e-11,27;CL:0002077,9.53e-11,34;CL:0000333,4.48e-08,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.06e-14!235;DOID:305!1.37e-13!106;DOID:14566!1.47e-13!239;DOID:0050687!6.25e-10!143 | |ontology_enrichment_disease=DOID:162!2.06e-14!235;DOID:305!1.37e-13!106;DOID:14566!1.47e-13!239;DOID:0050687!6.25e-10!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.26e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!1.26e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.59e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0002331;7.59e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.45e-07,10;UBERON:0000358,5.45e-07,10;UBERON:0000307,5.45e-07,10;UBERON:0000091,5.45e-07,10;UBERON:0000087,5.45e-07,10;UBERON:0007010,5.45e-07,10;UBERON:0007806,5.45e-07,10;UBERON:0008780,5.45e-07,10;UBERON:0005728,5.45e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.06978768047132,0.903106483949403,0.629686250509434,0,0,0,0,0.30120591877825,0,0.232401601740905,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0.737005903870608,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,1.32529768321485,1.04574548582567,1.34759371519982,2.27088765788066,0.72995471815166,0,0,0,0.464367928031979,0,0.828147600278907,0.168584690078102,0.964044119533928,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.737930631258681,0,0.329250856225877,1.1240175325762,0.201057944823262,0.185176890317059,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,1.16253575405585,0,0,0,0,0,0,2.09543051164158,2.67391897890794,1.17217447210047,0,3.80461723002297,6.30720421472227,2.5724378936752,0.336393253036082,0,0.4400297149257,0,0,0,0,0,1.02882949704857,1.41849132023278,0.799266537048298,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.0821271560138091,0,0.348631135379878,0.966875596732978,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0,0,0,0.647747748306418,1.54227252690289,0.541892875087706,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0.551346289938122,0,0,0.0852266274161009,0,0,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0.670302275535787,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,4.05931470284398,0,0.245040215981032,0,0,0.0711418433484141,0.478278818186467,3.19326994292507,0,1.2700414963433,0.324621940274555,0,0,0.94007937463814,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0.781552381608161,0.278406173895242,0,0.270455678475983,0,0,1.68426486367398,0,0.36408156524854,0.222886768554957,0,0,0,0.307160702099232,0,0,0.111308705022906,1.97764649072111,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0,0.349839999984783,0,0.910347586283997,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0.108647371922008,0,0,0,3.06579894587209,0,0,0,0,0,0.189753732724185,1.11255605286265,0,0,0.565412285735763,0.432777279484182,0.995261931078505,0.0884575645033392,0,1.77912677208373,1.72989514525104,2.40170483862547,0,0,0,0.547364367646998,0,3.88448607254548,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0.347119476670262,0.195984794828755,0.0870592065804026,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,2.59362750877391,0.80175617316141,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,1.16495949527454,9.61154824148129,9.80748714735881,9.50389968344007,0,0.423366660328922,0,0,0.643012593860077,0.825236619583403,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0,0,0,0,2.5426853765475,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.74988244777264,0.909894705249887,1.42732666772484,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30497145982606,0,0,0,0.358177682162975,0.308801447160972,0.219284049578707,0,0,0.168942440653073,0,1.0362910251936,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.392590874004102,0.471878893390961,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0.523813388962845,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,1.00108261702862,0,0,0.280272163313789,0,0,0,0,0.158013611732727,4.06844988788438,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0.975343399858155,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0.231522474323834,0.437119121007915,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0.799529247399431,0,0,0,0,0,0,0.473314686579554,0,0,0.5290268405154,0,0,0,0.378499274505237,0,0.380095503034311,0,1.06886962106224,0.0918948995348449,0,0,0,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0,2.24127426343202,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.06978768047132,0.903106483949403,0.629686250509434,0,0,0,0,0.30120591877825,0,0.232401601740905,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0.737005903870608,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,1.32529768321485,1.04574548582567,1.34759371519982,2.27088765788066,0.72995471815166,0,0,0,0.464367928031979,0,0.828147600278907,0.168584690078102,0.964044119533928,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.737930631258681,0,0.329250856225877,1.1240175325762,0.201057944823262,0.185176890317059,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,1.16253575405585,0,0,0,0,0,0,2.09543051164158,2.67391897890794,1.17217447210047,0,3.80461723002297,6.30720421472227,2.5724378936752,0.336393253036082,0,0.4400297149257,0,0,0,0,0,1.02882949704857,1.41849132023278,0.799266537048298,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.0821271560138091,0,0.348631135379878,0.966875596732978,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0,0,0,0.647747748306418,1.54227252690289,0.541892875087706,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0.551346289938122,0,0,0.0852266274161009,0,0,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0.670302275535787,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,4.05931470284398,0,0.245040215981032,0,0,0.0711418433484141,0.478278818186467,3.19326994292507,0,1.2700414963433,0.324621940274555,0,0,0.94007937463814,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0.781552381608161,0.278406173895242,0,0.270455678475983,0,0,1.68426486367398,0,0.36408156524854,0.222886768554957,0,0,0,0.307160702099232,0,0,0.111308705022906,1.97764649072111,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0,0.349839999984783,0,0.910347586283997,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0.108647371922008,0,0,0,3.06579894587209,0,0,0,0,0,0.189753732724185,1.11255605286265,0,0,0.565412285735763,0.432777279484182,0.995261931078505,0.0884575645033392,0,1.77912677208373,1.72989514525104,2.40170483862547,0,0,0,0.547364367646998,0,3.88448607254548,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0.347119476670262,0.195984794828755,0.0870592065804026,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,2.59362750877391,0.80175617316141,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,1.16495949527454,9.61154824148129,9.80748714735881,9.50389968344007,0,0.423366660328922,0,0,0.643012593860077,0.825236619583403,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0,0,0,0,2.5426853765475,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.74988244777264,0.909894705249887,1.42732666772484,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30497145982606,0,0,0,0.358177682162975,0.308801447160972,0.219284049578707,0,0,0.168942440653073,0,1.0362910251936,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.392590874004102,0.471878893390961,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0.523813388962845,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,1.00108261702862,0,0,0.280272163313789,0,0,0,0,0.158013611732727,4.06844988788438,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0.975343399858155,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0.231522474323834,0.437119121007915,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0.799529247399431,0,0,0,0,0,0,0.473314686579554,0,0,0.5290268405154,0,0,0,0.378499274505237,0,0.380095503034311,0,1.06886962106224,0.0918948995348449,0,0,0,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0,2.24127426343202,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p2@PEX10 | |short_description=p2@PEX10 | ||
}} | }} |
Latest revision as of 09:56, 16 September 2015
Short description: | p2@PEX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PEX10_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000508384_5end |
EntrezGene: | PEX10 |
HGNC: | 8851 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.13e-33 | 10 |
melanoblast | 1.13e-33 | 10 |
pigment cell | 1.40e-23 | 14 |
embryonic stem cell | 1.02e-20 | 5 |
neurecto-epithelial cell | 5.26e-16 | 20 |
columnar/cuboidal epithelial cell | 1.99e-11 | 27 |
ecto-epithelial cell | 9.53e-11 | 34 |
migratory neural crest cell | 4.48e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.45e-07 | 10 |
blastocyst | 5.45e-07 | 10 |
blastula | 5.45e-07 | 10 |
bilaminar disc | 5.45e-07 | 10 |
inner cell mass | 5.45e-07 | 10 |
cleaving embryo | 5.45e-07 | 10 |
connecting stalk | 5.45e-07 | 10 |
inner cell mass derived epiblast | 5.45e-07 | 10 |
extraembryonic mesoderm | 5.45e-07 | 10 |