FFCP PHASE1:Hg19::chr2:189157498..189157510,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51454 | |EntrezGene=51454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18649 | |HGNC=18649 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBP9 | |UniProt=Q9UBP9 | ||
|association_with_transcript=0bp_to_ENST00000359135_5end | |association_with_transcript=0bp_to_ENST00000359135_5end | ||
|cluster_id=chr2:189157498..189157510,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_8_at_GULP1_5end | |description=CAGE_peak_8_at_GULP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.83e-20;5!CL:0002537;2.35e-07;5!CL:0000540;7.27e-07;6!CL:0000404;7.27e-07;6 | |ontology_enrichment_celltype_v019=CL:0002322;1.83e-20;5!CL:0002537;2.35e-07;5!CL:0000540;7.27e-07;6!CL:0000404;7.27e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.75e-21,5;CL:0002537,3.12e-07,5;CL:0000540,7.51e-07,6;CL:0000031,7.51e-07,6;CL:0000404,7.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;7.27e-07;6 | |ontology_enrichment_development_v019=CL:0000031;7.27e-07;6 | ||
|ontology_enrichment_disease=DOID:0050687!3.03e-07!143 | |ontology_enrichment_disease=DOID:0050687!3.03e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.12e-09;2 | |ontology_enrichment_disease_v019=DOID:4468;2.12e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,2.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.19e-07!347 | |ontology_enrichment_uberon=UBERON:0000481!3.19e-07!347 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.17e-07,14;UBERON:0000158,9.17e-07,14 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0.487932798790507,0.492484232307152,0.204000691244253,0,0.85870796139317,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.850813354476611,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,0,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0,0,0.201504196455281,0,1.15956511897978,0.272746120590835,0.286804595389004,6.09868530647977,1.85541675650079,2.09149097165133,4.5610864206763,3.78481276313443,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.343135620597051,0.219500570817251,0,0,0,0,0,1.44331342025273,0.231860809950154,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0.813795071099207,0,0.892144943985809,1.57702415033935,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0,0.434418072340414,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.896974044789907,0,0,0,0,0,0,0,0,0.241718899183244,0,0.368323955743585,0.229628896329213,1.27463817604702,0.393373244878272,1.35359883872224,1.15523005656622,0,0,0.73886140225013,0,0,0,0,0.541892875087706,0,1.27438136522519,1.66215201785745,0.447749509444357,0,0,0.769350375349168,0,0.976135183992909,10.5101831880677,0.915694648183434,0.742585499285292,0,0,0,0.096670718292122,0.154048617114644,0,0,0.644521469209642,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0.382838137483752,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0.719489830333259,0.54907405947211,0,0,0,0,0,0,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0.294747123039363,0.35667105148125,0.709522128141196,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,7.90807926524945,0,0,0,0,0,0,0,0,0,0,0,0,1.6023610669121,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0.36408156524854,0,0.284136146806413,0.47748896947538,0.296964680832639,1.53580351049616,0,0.140669416410513,0.667852230137435,0,0,0.398495976502139,0.276283915531148,1.25966373927138,0.20453736500431,0,0,0.449341755736634,8.59301638442924,0,0.295930216910801,0,2.22273980289274,0,0,0,0.260427761085233,0,0.724999575434793,1.0241410345695,1.01701460117107,0.236387681767936,0,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.692552326534174,0.113942055847001,0,0.269272933229316,0,0.638002319463839,0.549585560411174,2.13213910407454,0,0,0.166211681900156,0.225595660617181,0,0,0,0,3.37596903244843,4.40728582029699,0.706765357169704,0,0,0.353830258013357,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0.789168805698781,1.20990716048664,0,0,0.150323419414493,0,0.664653872707185,0.661983911750998,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0.19871461170299,0.0633107959558787,0.391102765469606,0.400794101257669,0.213452994739353,0,0.288180834308212,0.114536596165916,0.343189995723929,0.432164393964449,0.124252535565433,0,0.135904206073614,0.313808538937,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,4.34033500855552,4.26372253451425,4.56984371832104,0,0,0.0607495566580247,0,0.551639951094387,0.944182586429966,0.105600336519406,0,0.575745591958336,0,0.662091970365432,0,1.08599920350743,0,0,0,0,1.5334921960688,0.113312091520126,0,0,0.258565912723101,0,4.44825778499256,0,0.106787412567695,1.25763444079733,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.250381861413,0,0,0.310482014706917,0,0.124980407962107,1.36484205787483,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0,0.443565449968902,0.955780602982214,0,0,1.65882483136342,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,1.03018711554838,0,0,0.770479321629213,0,0,0,0,0,1.07453304648892,0.308801447160972,0.219284049578707,0.176689145945881,0,0.506827321959218,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.368211900503681,0.559518030877778,0,0.639471856518258,0.646948868380091,0,0.982886743728125,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0.589848616738702,0,0.462102664601353,0,0,0,0.300841313397029,0,7.81514011233093,0.523813388962845,0,1.47856086217045,0,0,0.413373593002368,0,0.546974809018219,0,0,0.175871244359621,0.255524855279191,0,0,0.606965604236632,0,25.9897944576532,0,0,0.815636795721981,0,0.590969204419841,0.889851215136553,0.941917114206168,0.157115589916002,0.560544326627578,0,0,0,1.28657779517981,0,1.04617282831313,0.695433089210318,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0.62041277132864,0,0,0.687051635306701,2.56027642462766,0,0.102662806856247,2.3196288626764,0.971421986118279,0,0,0.356760272332706,0.45178432815584,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,1.07132363163395,0.352894871715692,0.561689566824178,0,0.458729283404541,0,0.473314686579554,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.327796715891087,0.253397002022874,0,0,0.0918948995348449,0.250707539292375,0.378893491091197,0,0,0,0.213233981900981,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.190941474834495,0,0,0.342233301085281,0.134704106029175,0.430333232356058,0.332660356546013,0.0814032686109745,0.106727345877715,0,0.179650404213174,0,1.34465588601153,2.03448089157869,1.33151354837103,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0.487932798790507,0.492484232307152,0.204000691244253,0,0.85870796139317,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.850813354476611,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,0,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0,0,0.201504196455281,0,1.15956511897978,0.272746120590835,0.286804595389004,6.09868530647977,1.85541675650079,2.09149097165133,4.5610864206763,3.78481276313443,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.343135620597051,0.219500570817251,0,0,0,0,0,1.44331342025273,0.231860809950154,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0.813795071099207,0,0.892144943985809,1.57702415033935,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0,0.434418072340414,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.896974044789907,0,0,0,0,0,0,0,0,0.241718899183244,0,0.368323955743585,0.229628896329213,1.27463817604702,0.393373244878272,1.35359883872224,1.15523005656622,0,0,0.73886140225013,0,0,0,0,0.541892875087706,0,1.27438136522519,1.66215201785745,0.447749509444357,0,0,0.769350375349168,0,0.976135183992909,10.5101831880677,0.915694648183434,0.742585499285292,0,0,0,0.096670718292122,0.154048617114644,0,0,0.644521469209642,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0.382838137483752,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0.719489830333259,0.54907405947211,0,0,0,0,0,0,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0.294747123039363,0.35667105148125,0.709522128141196,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,7.90807926524945,0,0,0,0,0,0,0,0,0,0,0,0,1.6023610669121,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0.36408156524854,0,0.284136146806413,0.47748896947538,0.296964680832639,1.53580351049616,0,0.140669416410513,0.667852230137435,0,0,0.398495976502139,0.276283915531148,1.25966373927138,0.20453736500431,0,0,0.449341755736634,8.59301638442924,0,0.295930216910801,0,2.22273980289274,0,0,0,0.260427761085233,0,0.724999575434793,1.0241410345695,1.01701460117107,0.236387681767936,0,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.692552326534174,0.113942055847001,0,0.269272933229316,0,0.638002319463839,0.549585560411174,2.13213910407454,0,0,0.166211681900156,0.225595660617181,0,0,0,0,3.37596903244843,4.40728582029699,0.706765357169704,0,0,0.353830258013357,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0.789168805698781,1.20990716048664,0,0,0.150323419414493,0,0.664653872707185,0.661983911750998,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0.19871461170299,0.0633107959558787,0.391102765469606,0.400794101257669,0.213452994739353,0,0.288180834308212,0.114536596165916,0.343189995723929,0.432164393964449,0.124252535565433,0,0.135904206073614,0.313808538937,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,4.34033500855552,4.26372253451425,4.56984371832104,0,0,0.0607495566580247,0,0.551639951094387,0.944182586429966,0.105600336519406,0,0.575745591958336,0,0.662091970365432,0,1.08599920350743,0,0,0,0,1.5334921960688,0.113312091520126,0,0,0.258565912723101,0,4.44825778499256,0,0.106787412567695,1.25763444079733,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.250381861413,0,0,0.310482014706917,0,0.124980407962107,1.36484205787483,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0,0.443565449968902,0.955780602982214,0,0,1.65882483136342,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,1.03018711554838,0,0,0.770479321629213,0,0,0,0,0,1.07453304648892,0.308801447160972,0.219284049578707,0.176689145945881,0,0.506827321959218,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.368211900503681,0.559518030877778,0,0.639471856518258,0.646948868380091,0,0.982886743728125,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0.589848616738702,0,0.462102664601353,0,0,0,0.300841313397029,0,7.81514011233093,0.523813388962845,0,1.47856086217045,0,0,0.413373593002368,0,0.546974809018219,0,0,0.175871244359621,0.255524855279191,0,0,0.606965604236632,0,25.9897944576532,0,0,0.815636795721981,0,0.590969204419841,0.889851215136553,0.941917114206168,0.157115589916002,0.560544326627578,0,0,0,1.28657779517981,0,1.04617282831313,0.695433089210318,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0.62041277132864,0,0,0.687051635306701,2.56027642462766,0,0.102662806856247,2.3196288626764,0.971421986118279,0,0,0.356760272332706,0.45178432815584,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,1.07132363163395,0.352894871715692,0.561689566824178,0,0.458729283404541,0,0.473314686579554,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.327796715891087,0.253397002022874,0,0,0.0918948995348449,0.250707539292375,0.378893491091197,0,0,0,0.213233981900981,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.190941474834495,0,0,0.342233301085281,0.134704106029175,0.430333232356058,0.332660356546013,0.0814032686109745,0.106727345877715,0,0.179650404213174,0,1.34465588601153,2.03448089157869,1.33151354837103,0.201273793591026,0 | ||
|short_description=p8@GULP1 | |short_description=p8@GULP1 | ||
}} | }} |
Latest revision as of 00:48, 19 September 2015
Short description: | p8@GULP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GULP1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000359135_5end |
EntrezGene: | GULP1 |
HGNC: | 18649 |
UniProt: | Q9UBP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.75e-21 | 5 |
amnion mesenchymal stem cell | 3.12e-07 | 5 |
neuron | 7.51e-07 | 6 |
neuroblast | 7.51e-07 | 6 |
electrically signaling cell | 7.51e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.17e-07 | 14 |
membranous layer | 9.17e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.22e-09 | 2 |