FFCP PHASE1:Hg19::chr20:24964780..24964791,-: Difference between revisions
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|id=chr20:24964780..24964791,-
|short_description=p7@C20orf3
|description=CAGE_peak_7_at_C20orf3_5end
|association_with_transcript=-142bp_to_AY359076_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57136 | |EntrezGene=57136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13238 | |HGNC=13238 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HDC9 | |UniProt=Q9HDC9 | ||
|association_with_transcript=-142bp_to_AY359076_5end | |||
|cluster_id=chr20:24964780..24964791,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_C20orf3_5end | |||
|id=chr20:24964780..24964791,- | |||
|ontology_enrichment_celltype=CL:0000136!8.83e-30!15;CL:0000325!8.77e-11!39;CL:0002521!1.05e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.14e-15;12!CL:0002521;5.54e-08;3!CL:0000136;4.95e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.11e-15,12;CL:0002521,5.54e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.03e-08;11!UBERON:0009497;4.13e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002190!1.05e-10!3;UBERON:0005057!9.17e-10!26;UBERON:0002107!9.61e-10!19;UBERON:0006925!9.61e-10!19;UBERON:0008836!9.61e-10!19;UBERON:0007029!1.48e-08!1;UBERON:0008835!2.21e-08!22;UBERON:0003894!2.21e-08!22;UBERON:0009854!5.26e-08!23;UBERON:0007499!2.41e-07!25;UBERON:0009497!2.41e-07!25;UBERON:0000015!2.41e-07!25;UBERON:0002423!2.41e-07!25;UBERON:0006235!2.41e-07!25;UBERON:0004161!2.41e-07!25;UBERON:0002368!3.81e-07!35;UBERON:0009856!4.73e-07!26;UBERON:0002072!9.43e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.15e-26;19!UBERON:0006925;2.15e-26;19!UBERON:0002423;4.00e-20;25!UBERON:0002365;3.13e-16;31!UBERON:0002330;3.13e-16;31!UBERON:0002368;4.56e-14;33!UBERON:0000949;2.99e-10;43!UBERON:0002190;5.54e-08;3!UBERON:0005172;1.86e-07;52!UBERON:0005173;1.86e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.09e-26,19;UBERON:0006925,2.09e-26,19;UBERON:0008836,2.09e-26,19;UBERON:0008835,7.63e-23,22;UBERON:0003894,7.63e-23,22;UBERON:0009854,7.32e-22,23;UBERON:0007499,3.92e-20,25;UBERON:0009497,3.92e-20,25;UBERON:0000015,3.92e-20,25;UBERON:0002423,3.92e-20,25;UBERON:0006235,3.92e-20,25;UBERON:0004161,3.92e-20,25;UBERON:0009856,2.28e-19,26;UBERON:0002365,2.81e-16,31;UBERON:0002330,2.81e-16,31;UBERON:0002368,1.94e-14,35;UBERON:0000949,2.91e-11,45;UBERON:0003929,2.12e-09,54;UBERON:0005172,2.12e-09,54;UBERON:0005173,2.12e-09,54;UBERON:0002530,1.31e-08,59;UBERON:0002417,1.81e-08,60;UBERON:0000916,1.81e-08,60;UBERON:0002190,5.54e-08,3 | |||
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|short_description=p7@C20orf3 | |||
}} | }} |
Latest revision as of 22:14, 24 September 2015
Short description: | p7@C20orf3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_C20orf3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -142bp_to_AY359076_5end |
EntrezGene: | C20orf3 |
HGNC: | 13238 |
UniProt: | Q9HDC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.11e-15 | 12 |
subcutaneous fat cell | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.09e-26 | 19 |
digestive gland | 2.09e-26 | 19 |
liver bud | 2.09e-26 | 19 |
hepatic diverticulum | 7.63e-23 | 22 |
liver primordium | 7.63e-23 | 22 |
digestive tract diverticulum | 7.32e-22 | 23 |
epithelial sac | 3.92e-20 | 25 |
epithelium of foregut-midgut junction | 3.92e-20 | 25 |
anatomical boundary | 3.92e-20 | 25 |
hepatobiliary system | 3.92e-20 | 25 |
foregut-midgut junction | 3.92e-20 | 25 |
septum transversum | 3.92e-20 | 25 |
sac | 2.28e-19 | 26 |
exocrine gland | 2.81e-16 | 31 |
exocrine system | 2.81e-16 | 31 |
endocrine gland | 1.94e-14 | 35 |
endocrine system | 2.91e-11 | 45 |
gut epithelium | 2.12e-09 | 54 |
abdomen element | 2.12e-09 | 54 |
abdominal segment element | 2.12e-09 | 54 |
gland | 1.31e-08 | 59 |
abdominal segment of trunk | 1.81e-08 | 60 |
abdomen | 1.81e-08 | 60 |
subcutaneous adipose tissue | 5.54e-08 | 3 |