FFCP PHASE1:Hg19::chr8:54934823..54934875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6917 | |EntrezGene=6917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11612 | |HGNC=11612 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFI1,B7Z4S1 | |UniProt=E5RFI1,B7Z4S1 | ||
|association_with_transcript=0bp_to_ENST00000517351,ENST00000518310,ENST00000521086,ENST00000522635_5end | |association_with_transcript=0bp_to_ENST00000517351,ENST00000518310,ENST00000521086,ENST00000522635_5end | ||
|cluster_id=chr8:54934823..54934875,- | |||
|description=CAGE_peak_1_at_TCEA1_5end | |description=CAGE_peak_1_at_TCEA1_5end | ||
|id=chr8:54934823..54934875,- | |id=chr8:54934823..54934875,- | ||
|ontology_enrichment_celltype=CL:0000945!6.00e-08!24;CL:0000826!6.00e-08!24;CL:0000542!8.87e-08!53;CL:0000051!8.87e-08!53;CL:0000838!1.95e-07!52 | |ontology_enrichment_celltype=CL:0000945!6.00e-08!24;CL:0000826!6.00e-08!24;CL:0000542!8.87e-08!53;CL:0000051!8.87e-08!53;CL:0000838!1.95e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.66e-08;24 | |ontology_enrichment_celltype_v019=CL:0000945;6.66e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.00e-08,24;CL:0000826,6.00e-08,24;CL:0000542,8.87e-08,53;CL:0000051,8.87e-08,53;CL:0000838,1.95e-07,52 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.08e-43!235;DOID:14566!5.33e-42!239;DOID:0050687!8.60e-25!143;DOID:0050686!1.55e-24!137;DOID:305!2.13e-15!106;DOID:2531!1.38e-13!51;DOID:0060083!1.38e-13!51;DOID:1240!3.15e-09!39;DOID:3095!9.62e-08!22;DOID:2994!9.62e-08!22;DOID:8692!1.15e-07!31 | |ontology_enrichment_disease=DOID:162!3.08e-43!235;DOID:14566!5.33e-42!239;DOID:0050687!8.60e-25!143;DOID:0050686!1.55e-24!137;DOID:305!2.13e-15!106;DOID:2531!1.38e-13!51;DOID:0060083!1.38e-13!51;DOID:1240!3.15e-09!39;DOID:3095!9.62e-08!22;DOID:2994!9.62e-08!22;DOID:8692!1.15e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:2531;6.63e-08;51!DOID:0060083;6.63e-08;51!DOID:3095;1.04e-07;22!DOID:2994;1.04e-07;22!DOID:8692;1.63e-07;31!DOID:1240;2.90e-07;39 | |ontology_enrichment_disease_v019=DOID:2531;6.63e-08;51!DOID:0060083;6.63e-08;51!DOID:3095;1.04e-07;22!DOID:2994;1.04e-07;22!DOID:8692;1.63e-07;31!DOID:1240;2.90e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:162,3.08e-43,235;DOID:14566,5.33e-42,239;DOID:0050687,8.60e-25,143;DOID:0050686,1.55e-24,137;DOID:305,2.13e-15,106;DOID:2531,1.38e-13,51;DOID:0060083,1.38e-13,51;DOID:1240,3.15e-09,39;DOID:3095,9.62e-08,22;DOID:2994,9.62e-08,22;DOID:8692,1.15e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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45532977 | ||
|short_description=p1@TCEA1 | |short_description=p1@TCEA1 | ||
}} | }} |
Latest revision as of 12:20, 18 September 2015
Short description: | p1@TCEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCEA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517351, ENST00000518310, ENST00000521086, ENST00000522635_5end |
EntrezGene: | TCEA1 |
HGNC: | 11612 |
UniProt: | E5RFI1B7Z4S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.00e-08 | 24 |
pro-B cell | 6.00e-08 | 24 |
lymphocyte | 8.87e-08 | 53 |
common lymphoid progenitor | 8.87e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.95e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.08e-43 | 235 |
disease of cellular proliferation | 5.33e-42 | 239 |
cell type cancer | 8.60e-25 | 143 |
organ system cancer | 1.55e-24 | 137 |
carcinoma | 2.13e-15 | 106 |
hematologic cancer | 1.38e-13 | 51 |
immune system cancer | 1.38e-13 | 51 |
leukemia | 3.15e-09 | 39 |
germ cell and embryonal cancer | 9.62e-08 | 22 |
germ cell cancer | 9.62e-08 | 22 |
myeloid leukemia | 1.15e-07 | 31 |