FFCP PHASE1:Hg19::chr3:56809721..56809764,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50650 | |EntrezGene=50650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=683 | |HGNC=683 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR81 | |UniProt=Q9NR81 | ||
|association_with_transcript=0bp_to_NM_001128616,uc003dif.2_5end | |association_with_transcript=0bp_to_NM_001128616,uc003dif.2_5end | ||
|cluster_id=chr3:56809721..56809764,- | |||
|coexpression_cluster_id=C2240 | |coexpression_cluster_id=C2240 | ||
|description=CAGE_peak_8_at_ARHGEF3_5end | |description=CAGE_peak_8_at_ARHGEF3_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.78e-19;3!UBERON:0006601;3.67e-14;82!UBERON:0006222;3.73e-07;1 | |ontology_enrichment_development_v019=UBERON:0006215;1.78e-19;3!UBERON:0006601;3.67e-14;82!UBERON:0006222;3.73e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.10e-69!57;UBERON:0005068!2.10e-69!57;UBERON:0006241!2.10e-69!57;UBERON:0007135!2.10e-69!57;UBERON:0002616!2.77e-63!59;UBERON:0002780!3.79e-60!41;UBERON:0001890!3.79e-60!41;UBERON:0006240!3.79e-60!41;UBERON:0003080!1.67e-58!42;UBERON:0000955!1.52e-57!69;UBERON:0006238!1.52e-57!69;UBERON:0001017!2.48e-54!82;UBERON:0005743!1.21e-53!86;UBERON:0007023!4.29e-53!115;UBERON:0000073!1.18e-49!94;UBERON:0001016!1.18e-49!94;UBERON:0001893!3.21e-49!34;UBERON:0002020!6.54e-49!34;UBERON:0003528!6.54e-49!34;UBERON:0002791!7.09e-47!33;UBERON:0003075!1.13e-46!86;UBERON:0007284!1.13e-46!86;UBERON:0001869!1.56e-45!32;UBERON:0002619!9.56e-45!22;UBERON:0002346!4.84e-44!90;UBERON:0001950!1.85e-40!20;UBERON:0003056!8.36e-40!61;UBERON:0000956!7.89e-39!25;UBERON:0000203!7.89e-39!25;UBERON:0000153!3.41e-31!129;UBERON:0007811!3.41e-31!129;UBERON:0000033!2.73e-30!123;UBERON:0004121!5.71e-22!169;UBERON:0000924!3.63e-21!173;UBERON:0006601!3.63e-21!173;UBERON:0000025!1.92e-17!194;UBERON:0000200!1.19e-15!6;UBERON:0001871!4.97e-15!7;UBERON:0002021!4.34e-13!5;UBERON:0004111!5.01e-13!241;UBERON:0000477!5.71e-13!286;UBERON:0000349!1.21e-12!5;UBERON:0004733!1.36e-12!12;UBERON:0002028!1.36e-12!12;UBERON:0007277!1.36e-12!12;UBERON:0003076!2.68e-12!15;UBERON:0003057!2.68e-12!15;UBERON:0001894!4.58e-12!7;UBERON:0006222!4.58e-12!7;UBERON:0002420!6.97e-12!9;UBERON:0007245!6.97e-12!9;UBERON:0010009!6.97e-12!9;UBERON:0010011!6.97e-12!9;UBERON:0000454!6.97e-12!9;UBERON:0004732!1.69e-11!13;UBERON:0002308!1.87e-11!9;UBERON:0000125!1.87e-11!9;UBERON:0002298!1.64e-10!8;UBERON:0000483!2.12e-10!309;UBERON:0000119!3.60e-10!312;UBERON:0002680!7.08e-10!9;UBERON:0001895!7.08e-10!9;UBERON:0010092!7.08e-10!9;UBERON:0000064!3.15e-09!219;UBERON:0000475!7.05e-09!365;UBERON:0001872!8.81e-09!5;UBERON:0002771!1.66e-08!3;UBERON:0000481!3.59e-08!347;UBERON:0000988!4.41e-08!3;UBERON:0009663!7.61e-08!7;UBERON:0006331!2.50e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!2.10e-69!57;UBERON:0005068!2.10e-69!57;UBERON:0006241!2.10e-69!57;UBERON:0007135!2.10e-69!57;UBERON:0002616!2.77e-63!59;UBERON:0002780!3.79e-60!41;UBERON:0001890!3.79e-60!41;UBERON:0006240!3.79e-60!41;UBERON:0003080!1.67e-58!42;UBERON:0000955!1.52e-57!69;UBERON:0006238!1.52e-57!69;UBERON:0001017!2.48e-54!82;UBERON:0005743!1.21e-53!86;UBERON:0007023!4.29e-53!115;UBERON:0000073!1.18e-49!94;UBERON:0001016!1.18e-49!94;UBERON:0001893!3.21e-49!34;UBERON:0002020!6.54e-49!34;UBERON:0003528!6.54e-49!34;UBERON:0002791!7.09e-47!33;UBERON:0003075!1.13e-46!86;UBERON:0007284!1.13e-46!86;UBERON:0001869!1.56e-45!32;UBERON:0002619!9.56e-45!22;UBERON:0002346!4.84e-44!90;UBERON:0001950!1.85e-40!20;UBERON:0003056!8.36e-40!61;UBERON:0000956!7.89e-39!25;UBERON:0000203!7.89e-39!25;UBERON:0000153!3.41e-31!129;UBERON:0007811!3.41e-31!129;UBERON:0000033!2.73e-30!123;UBERON:0004121!5.71e-22!169;UBERON:0000924!3.63e-21!173;UBERON:0006601!3.63e-21!173;UBERON:0000025!1.92e-17!194;UBERON:0000200!1.19e-15!6;UBERON:0001871!4.97e-15!7;UBERON:0002021!4.34e-13!5;UBERON:0004111!5.01e-13!241;UBERON:0000477!5.71e-13!286;UBERON:0000349!1.21e-12!5;UBERON:0004733!1.36e-12!12;UBERON:0002028!1.36e-12!12;UBERON:0007277!1.36e-12!12;UBERON:0003076!2.68e-12!15;UBERON:0003057!2.68e-12!15;UBERON:0001894!4.58e-12!7;UBERON:0006222!4.58e-12!7;UBERON:0002420!6.97e-12!9;UBERON:0007245!6.97e-12!9;UBERON:0010009!6.97e-12!9;UBERON:0010011!6.97e-12!9;UBERON:0000454!6.97e-12!9;UBERON:0004732!1.69e-11!13;UBERON:0002308!1.87e-11!9;UBERON:0000125!1.87e-11!9;UBERON:0002298!1.64e-10!8;UBERON:0000483!2.12e-10!309;UBERON:0000119!3.60e-10!312;UBERON:0002680!7.08e-10!9;UBERON:0001895!7.08e-10!9;UBERON:0010092!7.08e-10!9;UBERON:0000064!3.15e-09!219;UBERON:0000475!7.05e-09!365;UBERON:0001872!8.81e-09!5;UBERON:0002771!1.66e-08!3;UBERON:0000481!3.59e-08!347;UBERON:0000988!4.41e-08!3;UBERON:0009663!7.61e-08!7;UBERON:0006331!2.50e-07!3 | ||
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|short_description=p8@ARHGEF3 | |short_description=p8@ARHGEF3 | ||
}} | }} |
Latest revision as of 03:47, 19 September 2015
Short description: | p8@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGEF3_5end |
Coexpression cluster: | C2240_anaplastic_cerebellum_occipital_insula_medial_frontal_postcentral |
Association with transcript: | 0bp_to_NM_001128616, uc003dif.2_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | Q9NR81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data