FFCP PHASE1:Hg19::chr5:95768869..95768880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5122 | |EntrezGene=5122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8743 | |HGNC=8743 | ||
|TSSclassifier=strong | |||
|UniProt=P29120 | |UniProt=P29120 | ||
|association_with_transcript=71bp_to_uc003kls.1_5end | |association_with_transcript=71bp_to_uc003kls.1_5end | ||
|cluster_id=chr5:95768869..95768880,- | |||
|coexpression_cluster_id=C2834 | |coexpression_cluster_id=C2834 | ||
|description=CAGE_peak_5_at_PCSK1_5end | |description=CAGE_peak_5_at_PCSK1_5end | ||
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|ontology_enrichment_celltype=CL:0000047!4.36e-07!8;CL:0000153!6.78e-07!9;CL:0000447!6.78e-07!9 | |ontology_enrichment_celltype=CL:0000047!4.36e-07!8;CL:0000153!6.78e-07!9;CL:0000447!6.78e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.46e-13;9!CL:0000447;2.46e-13;9!CL:0000138;3.17e-13;6!CL:0000327;6.66e-08;15 | |ontology_enrichment_celltype_v019=CL:0000153;2.46e-13;9!CL:0000447;2.46e-13;9!CL:0000138;3.17e-13;6!CL:0000327;6.66e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.25e-13,9;CL:0000447,2.25e-13,9;CL:0000058,2.80e-13,6;CL:0000138,2.80e-13,6;CL:0000327,6.33e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.68e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.68e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.86e-08;10 | |ontology_enrichment_disease_v019=DOID:171;2.86e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.36e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.61e-30!82;UBERON:0005743!1.46e-29!86;UBERON:0001049!1.72e-28!57;UBERON:0005068!1.72e-28!57;UBERON:0006241!1.72e-28!57;UBERON:0007135!1.72e-28!57;UBERON:0000073!3.39e-28!94;UBERON:0001016!3.39e-28!94;UBERON:0002780!1.15e-25!41;UBERON:0001890!1.15e-25!41;UBERON:0006240!1.15e-25!41;UBERON:0003080!7.51e-25!42;UBERON:0002346!8.44e-24!90;UBERON:0002616!2.86e-22!59;UBERON:0002619!1.43e-21!22;UBERON:0000955!2.99e-21!69;UBERON:0006238!2.99e-21!69;UBERON:0003075!5.13e-21!86;UBERON:0007284!5.13e-21!86;UBERON:0003056!1.66e-19!61;UBERON:0001950!3.38e-19!20;UBERON:0001893!4.92e-19!34;UBERON:0002020!5.17e-19!34;UBERON:0003528!5.17e-19!34;UBERON:0001869!6.30e-19!32;UBERON:0000956!2.10e-18!25;UBERON:0000203!2.10e-18!25;UBERON:0007023!3.20e-18!115;UBERON:0002791!1.05e-17!33;UBERON:0000924!1.14e-16!173;UBERON:0006601!1.14e-16!173;UBERON:0004121!1.15e-14!169;UBERON:0000153!3.36e-12!129;UBERON:0007811!3.36e-12!129;UBERON:0000033!7.48e-12!123;UBERON:0000200!9.04e-11!6;UBERON:0001894!1.54e-08!7;UBERON:0006222!1.54e-08!7;UBERON:0003296!6.63e-08!4;UBERON:0010133!6.63e-08!4 | |ontology_enrichment_uberon=UBERON:0001017!3.61e-30!82;UBERON:0005743!1.46e-29!86;UBERON:0001049!1.72e-28!57;UBERON:0005068!1.72e-28!57;UBERON:0006241!1.72e-28!57;UBERON:0007135!1.72e-28!57;UBERON:0000073!3.39e-28!94;UBERON:0001016!3.39e-28!94;UBERON:0002780!1.15e-25!41;UBERON:0001890!1.15e-25!41;UBERON:0006240!1.15e-25!41;UBERON:0003080!7.51e-25!42;UBERON:0002346!8.44e-24!90;UBERON:0002616!2.86e-22!59;UBERON:0002619!1.43e-21!22;UBERON:0000955!2.99e-21!69;UBERON:0006238!2.99e-21!69;UBERON:0003075!5.13e-21!86;UBERON:0007284!5.13e-21!86;UBERON:0003056!1.66e-19!61;UBERON:0001950!3.38e-19!20;UBERON:0001893!4.92e-19!34;UBERON:0002020!5.17e-19!34;UBERON:0003528!5.17e-19!34;UBERON:0001869!6.30e-19!32;UBERON:0000956!2.10e-18!25;UBERON:0000203!2.10e-18!25;UBERON:0007023!3.20e-18!115;UBERON:0002791!1.05e-17!33;UBERON:0000924!1.14e-16!173;UBERON:0006601!1.14e-16!173;UBERON:0004121!1.15e-14!169;UBERON:0000153!3.36e-12!129;UBERON:0007811!3.36e-12!129;UBERON:0000033!7.48e-12!123;UBERON:0000200!9.04e-11!6;UBERON:0001894!1.54e-08!7;UBERON:0006222!1.54e-08!7;UBERON:0003296!6.63e-08!4;UBERON:0010133!6.63e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.53e-37;20!UBERON:0002619;2.10e-33;22!UBERON:0000956;3.13e-29;25!UBERON:0000203;3.13e-29;25!UBERON:0001869;1.39e-27;32!UBERON:0001893;2.76e-26;34!UBERON:0003528;8.30e-24;34!UBERON:0002020;8.30e-24;34!UBERON:0002791;1.91e-23;32!UBERON:0002780;6.85e-23;41!UBERON:0001890;6.85e-23;41!UBERON:0002021;1.87e-16;5!UBERON:0000073;1.41e-14;53!UBERON:0002616;1.41e-14;53!UBERON:0000200;3.17e-13;6!UBERON:0003296;1.21e-11;4!UBERON:0010133;1.21e-11;4!UBERON:0000007;6.09e-11;2!UBERON:0001017;2.93e-10;75!UBERON:0001872;1.64e-09;5!UBERON:0000955;2.68e-09;68!UBERON:0001016;9.18e-09;83!UBERON:0001870;1.43e-07;3!UBERON:0007023;6.62e-07;114!UBERON:0001894;7.67e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001950;7.53e-37;20!UBERON:0002619;2.10e-33;22!UBERON:0000956;3.13e-29;25!UBERON:0000203;3.13e-29;25!UBERON:0001869;1.39e-27;32!UBERON:0001893;2.76e-26;34!UBERON:0003528;8.30e-24;34!UBERON:0002020;8.30e-24;34!UBERON:0002791;1.91e-23;32!UBERON:0002780;6.85e-23;41!UBERON:0001890;6.85e-23;41!UBERON:0002021;1.87e-16;5!UBERON:0000073;1.41e-14;53!UBERON:0002616;1.41e-14;53!UBERON:0000200;3.17e-13;6!UBERON:0003296;1.21e-11;4!UBERON:0010133;1.21e-11;4!UBERON:0000007;6.09e-11;2!UBERON:0001017;2.93e-10;75!UBERON:0001872;1.64e-09;5!UBERON:0000955;2.68e-09;68!UBERON:0001016;9.18e-09;83!UBERON:0001870;1.43e-07;3!UBERON:0007023;6.62e-07;114!UBERON:0001894;7.67e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.28e-37,20;UBERON:0002780,1.11e-33,41;UBERON:0001890,1.11e-33,41;UBERON:0003080,1.11e-33,41;UBERON:0006240,1.11e-33,41;UBERON:0002619,2.54e-33,22;UBERON:0001869,4.91e-30,32;UBERON:0000956,3.70e-29,25;UBERON:0000203,3.70e-29,25;UBERON:0000073,2.69e-28,53;UBERON:0002616,2.69e-28,53;UBERON:0001893,3.95e-28,34;UBERON:0003528,5.82e-28,34;UBERON:0002020,5.82e-28,34;UBERON:0001049,1.40e-26,56;UBERON:0005068,1.40e-26,56;UBERON:0006241,1.40e-26,56;UBERON:0007135,1.40e-26,56;UBERON:0002791,5.76e-26,32;UBERON:0001017,6.01e-26,81;UBERON:0001016,3.73e-25,89;UBERON:0000955,2.96e-23,68;UBERON:0006238,2.96e-23,68;UBERON:0003056,1.71e-21,61;UBERON:0002346,4.16e-20,86;UBERON:0003075,6.64e-17,82;UBERON:0007284,6.64e-17,82;UBERON:0002021,2.69e-16,5;UBERON:0004121,2.78e-13,171;UBERON:0000924,2.78e-13,171;UBERON:0006601,2.78e-13,171;UBERON:0000200,5.31e-13,6;UBERON:0007023,1.09e-12,114;UBERON:0010371,1.78e-12,104;UBERON:0003296,9.21e-12,4;UBERON:0010133,9.21e-12,4;UBERON:0000007,5.00e-11,2;UBERON:0011216,9.23e-11,223;UBERON:0010314,3.62e-10,132;UBERON:0001872,1.02e-09,5;UBERON:0001870,2.20e-07,3;UBERON:0001894,6.59e-07,7;UBERON:0006222,6.59e-07,7 | |||
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| ||
|short_description=p5@PCSK1 | |short_description=p5@PCSK1 | ||
}} | }} |
Latest revision as of 08:45, 19 September 2015
Short description: | p5@PCSK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PCSK1_5end |
Coexpression cluster: | C2834_nonsmall_argyrophil_pineal_somatostatinoma_occipital_Chondrocyte_peripheral |
Association with transcript: | 71bp_to_uc003kls.1_5end |
EntrezGene: | PCSK1 |
HGNC: | 8743 |
UniProt: | P29120 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.25e-13 | 9 |
carbohydrate secreting cell | 2.25e-13 | 9 |
chondroblast | 2.80e-13 | 6 |
chondrocyte | 2.80e-13 | 6 |
extracellular matrix secreting cell | 6.33e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.36e-08 | 10 |