FFCP PHASE1:Hg19::chr3:98558278..98558282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98558278..98558282,- | |||
|description=CAGE_peak_at_chr3:98558278..98558282,- | |description=CAGE_peak_at_chr3:98558278..98558282,- | ||
|id=chr3:98558278..98558282,- | |id=chr3:98558278..98558282,- | ||
|ontology_enrichment_celltype=CL:0000243!4.91e-08!15;CL:0000125!4.91e-08!15;CL:0000030!4.91e-08!15;CL:0000339!4.91e-08!15;CL:0000095!6.69e-07!17;CL:0000123!6.69e-07!17 | |ontology_enrichment_celltype=CL:0000243!4.91e-08!15;CL:0000125!4.91e-08!15;CL:0000030!4.91e-08!15;CL:0000339!4.91e-08!15;CL:0000095!6.69e-07!17;CL:0000123!6.69e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.38e-27;3!CL:0000067;2.38e-27;3!CL:0005012;2.38e-27;3!CL:0002304;2.38e-27;3!CL:0000322;6.13e-08;3!CL:0002579;6.13e-08;3!CL:0000075;2.99e-07;27 | |ontology_enrichment_celltype_v019=CL:0000064;2.38e-27;3!CL:0000067;2.38e-27;3!CL:0005012;2.38e-27;3!CL:0002304;2.38e-27;3!CL:0000322;6.13e-08;3!CL:0002579;6.13e-08;3!CL:0000075;2.99e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.59e-27,3;CL:0000067,1.59e-27,3;CL:0005012,1.59e-27,3;CL:0002304,1.59e-27,3;CL:0000322,5.18e-08,3;CL:0002579,8.29e-08,3;CL:0000075,2.77e-07,27 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:193!7.93e-09!29;DOID:2394!1.46e-08!14;DOID:120!2.17e-08!27 | |ontology_enrichment_disease=DOID:193!7.93e-09!29;DOID:2394!1.46e-08!14;DOID:120!2.17e-08!27 | ||
|ontology_enrichment_disease_v019=DOID:3910;2.87e-11;2 | |ontology_enrichment_disease_v019=DOID:3910;2.87e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,2.23e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!6.19e-07!4 | |ontology_enrichment_uberon=UBERON:0000488!6.19e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.38e-27;3!UBERON:0001775;2.38e-27;3!UBERON:0000488;8.54e-21;4!UBERON:0007625;6.89e-17;11!UBERON:0002203;3.25e-14;6!UBERON:0001768;3.25e-14;6!UBERON:0002200;3.25e-14;6!UBERON:0001801;2.02e-13;14!UBERON:0004903;2.87e-11;2!UBERON:0002173;2.87e-11;2!UBERON:0002186;2.87e-11;2!UBERON:0000019;4.65e-10;19!UBERON:0000047;4.65e-10;19!UBERON:0004088;4.65e-10;19!UBERON:0010230;4.65e-10;19!UBERON:0000970;1.38e-09;20!UBERON:0002104;3.69e-09;21!UBERON:0001456;3.69e-09;21!UBERON:0000020;2.05e-08;23!UBERON:0006876;3.49e-08;11!UBERON:0001032;4.36e-08;24!UBERON:0004456;4.36e-08;24!UBERON:0004821;6.13e-08;3!UBERON:0007499;6.13e-08;3!UBERON:0003215;6.13e-08;3!UBERON:0010368;6.13e-08;3!UBERON:0009911;6.13e-08;3!UBERON:0002299;6.13e-08;3!UBERON:0006524;6.13e-08;3!UBERON:0008874;6.13e-08;3!UBERON:0002169;6.13e-08;3!UBERON:0004894;6.13e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001778;2.38e-27;3!UBERON:0001775;2.38e-27;3!UBERON:0000488;8.54e-21;4!UBERON:0007625;6.89e-17;11!UBERON:0002203;3.25e-14;6!UBERON:0001768;3.25e-14;6!UBERON:0002200;3.25e-14;6!UBERON:0001801;2.02e-13;14!UBERON:0004903;2.87e-11;2!UBERON:0002173;2.87e-11;2!UBERON:0002186;2.87e-11;2!UBERON:0000019;4.65e-10;19!UBERON:0000047;4.65e-10;19!UBERON:0004088;4.65e-10;19!UBERON:0010230;4.65e-10;19!UBERON:0000970;1.38e-09;20!UBERON:0002104;3.69e-09;21!UBERON:0001456;3.69e-09;21!UBERON:0000020;2.05e-08;23!UBERON:0006876;3.49e-08;11!UBERON:0001032;4.36e-08;24!UBERON:0004456;4.36e-08;24!UBERON:0004821;6.13e-08;3!UBERON:0007499;6.13e-08;3!UBERON:0003215;6.13e-08;3!UBERON:0010368;6.13e-08;3!UBERON:0009911;6.13e-08;3!UBERON:0002299;6.13e-08;3!UBERON:0006524;6.13e-08;3!UBERON:0008874;6.13e-08;3!UBERON:0002169;6.13e-08;3!UBERON:0004894;6.13e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.59e-27,3;UBERON:0001775,1.59e-27,3;UBERON:0000488,6.33e-21,4;UBERON:0007625,5.70e-17,11;UBERON:0002203,2.66e-14,6;UBERON:0001768,2.66e-14,6;UBERON:0002200,2.66e-14,6;UBERON:0001801,1.75e-13,14;UBERON:0004903,2.23e-11,2;UBERON:0002173,2.23e-11,2;UBERON:0002186,2.23e-11,2;UBERON:0000019,1.24e-09,20;UBERON:0000047,1.24e-09,20;UBERON:0010312,1.24e-09,20;UBERON:0004088,1.24e-09,20;UBERON:0010230,1.24e-09,20;UBERON:0003072,1.24e-09,20;UBERON:0004128,1.24e-09,20;UBERON:0003071,1.24e-09,20;UBERON:0000970,3.35e-09,21;UBERON:0002104,3.35e-09,21;UBERON:0001456,8.25e-09,22;UBERON:0006876,3.14e-08,11;UBERON:0003056,3.84e-08,61;UBERON:0000020,4.00e-08,24;UBERON:0001032,4.00e-08,24;UBERON:0004456,4.00e-08,24;UBERON:0004821,5.18e-08,3;UBERON:0003215,5.18e-08,3;UBERON:0010368,5.18e-08,3;UBERON:0009911,5.18e-08,3;UBERON:0002299,5.18e-08,3;UBERON:0006524,5.18e-08,3;UBERON:0008874,5.18e-08,3;UBERON:0002169,5.18e-08,3;UBERON:0004894,5.18e-08,3 | |||
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|short_description=p@chr3:98558278..98558282,- | |short_description=p@chr3:98558278..98558282,- | ||
}} | }} |
Latest revision as of 00:08, 30 July 2015
Short description: | p@chr3:98558278..98558282, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98558278..98558282, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.59e-27 | 3 |
ciliated epithelial cell | 1.59e-27 | 3 |
multi-ciliated epithelial cell | 1.59e-27 | 3 |
non-pigmented ciliary epithelial cell | 1.59e-27 | 3 |
pneumocyte | 5.18e-08 | 3 |
omentum preadipocyte | 8.29e-08 | 3 |
columnar/cuboidal epithelial cell | 2.77e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.59e-27 | 3 |
ciliary body | 1.59e-27 | 3 |
atypical epithelium | 6.33e-21 | 4 |
pigment epithelium of eye | 5.70e-17 | 11 |
vasculature of eye | 2.66e-14 | 6 |
uvea | 2.66e-14 | 6 |
vasculature of head | 2.66e-14 | 6 |
anterior segment of eyeball | 1.75e-13 | 14 |
bronchoalveolar duct junction | 2.23e-11 | 2 |
alveolar duct | 2.23e-11 | 2 |
bronchiole | 2.23e-11 | 2 |
camera-type eye | 1.24e-09 | 20 |
simple eye | 1.24e-09 | 20 |
immature eye | 1.24e-09 | 20 |
ocular region | 1.24e-09 | 20 |
eyeball of camera-type eye | 1.24e-09 | 20 |
optic cup | 1.24e-09 | 20 |
optic vesicle | 1.24e-09 | 20 |
eye primordium | 1.24e-09 | 20 |
eye | 3.35e-09 | 21 |
visual system | 3.35e-09 | 21 |
face | 8.25e-09 | 22 |
vasculature of organ | 3.14e-08 | 11 |
pre-chordal neural plate | 3.84e-08 | 61 |
sense organ | 4.00e-08 | 24 |
sensory system | 4.00e-08 | 24 |
entire sense organ system | 4.00e-08 | 24 |
pulmonary alveolus epithelium | 5.18e-08 | 3 |
alveolus | 5.18e-08 | 3 |
pulmonary lobule | 5.18e-08 | 3 |
lobule | 5.18e-08 | 3 |
alveolus of lung | 5.18e-08 | 3 |
alveolar system | 5.18e-08 | 3 |
pulmonary acinus | 5.18e-08 | 3 |
alveolar sac | 5.18e-08 | 3 |
alveolar wall | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.23e-11 | 2 |