FFCP PHASE1:Hg19::chr20:20392704..20392711,-: Difference between revisions
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|id=chr20:20392704..20392711,-
|short_description=p@chr20:20392704..20392711,-
|description=CAGE_peak_at_chr20:20392704..20392711,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:20392704..20392711,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr20:20392704..20392711,- | |||
|id=chr20:20392704..20392711,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.55e-98;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.55e-98,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.48e-40,5;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002616!3.15e-27!59;UBERON:0001049!1.87e-24!57;UBERON:0005068!1.87e-24!57;UBERON:0006241!1.87e-24!57;UBERON:0007135!1.87e-24!57;UBERON:0000955!1.34e-22!69;UBERON:0006238!1.34e-22!69;UBERON:0001017!1.86e-21!82;UBERON:0005743!2.36e-20!86;UBERON:0000073!3.37e-18!94;UBERON:0001016!3.37e-18!94;UBERON:0001905!1.16e-17!2;UBERON:0002757!1.16e-17!2;UBERON:0010134!1.16e-17!2;UBERON:0002784!1.16e-17!2;UBERON:0005408!1.16e-17!2;UBERON:0001899!1.16e-17!2;UBERON:0002780!1.79e-17!41;UBERON:0001890!1.79e-17!41;UBERON:0006240!1.79e-17!41;UBERON:0002346!4.35e-17!90;UBERON:0003080!4.96e-17!42;UBERON:0003075!1.78e-15!86;UBERON:0007284!1.78e-15!86;UBERON:0000153!1.72e-14!129;UBERON:0007811!1.72e-14!129;UBERON:0000033!1.13e-11!123;UBERON:0000924!1.48e-11!173;UBERON:0006601!1.48e-11!173;UBERON:0003056!2.50e-11!61;UBERON:0001894!4.32e-11!7;UBERON:0006222!4.32e-11!7;UBERON:0004733!7.72e-11!12;UBERON:0002028!7.72e-11!12;UBERON:0007277!7.72e-11!12;UBERON:0002791!1.02e-10!33;UBERON:0002020!1.89e-10!34;UBERON:0003528!1.89e-10!34;UBERON:0001893!2.16e-10!34;UBERON:0004121!2.18e-10!169;UBERON:0004732!5.11e-10!13;UBERON:0007029!1.32e-09!1;UBERON:0007023!2.34e-09!115;UBERON:0002902!2.35e-09!1;UBERON:0009899!2.35e-09!1;UBERON:0001882!2.77e-09!1;UBERON:0005403!2.77e-09!1;UBERON:0003296!2.77e-09!4;UBERON:0010133!2.77e-09!4;UBERON:0002336!3.83e-09!1;UBERON:0001018!3.83e-09!1;UBERON:0002473!3.83e-09!1;UBERON:0005340!3.83e-09!1;UBERON:0002316!3.83e-09!1;UBERON:0003544!3.83e-09!1;UBERON:0001020!3.83e-09!1;UBERON:0005970!3.83e-09!1;UBERON:0002437!3.83e-09!1;UBERON:0002022!5.72e-09!1;UBERON:0003076!1.06e-08!15;UBERON:0003057!1.06e-08!15;UBERON:0002370!1.22e-08!4;UBERON:0005058!1.22e-08!4;UBERON:0009113!1.22e-08!4;UBERON:0003295!1.22e-08!4;UBERON:0005562!1.22e-08!4;UBERON:0002680!1.28e-08!9;UBERON:0001895!1.28e-08!9;UBERON:0010092!1.28e-08!9;UBERON:0002308!1.45e-08!9;UBERON:0000125!1.45e-08!9;UBERON:0001869!2.89e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.55e-98;2!UBERON:0004801;1.55e-98;2!UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;4.53e-08;33!UBERON:0003133;2.32e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.55e-98,2;UBERON:0004801,1.55e-98,2;UBERON:0000002,4.27e-34,6;UBERON:0001560,4.27e-34,6;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p@chr20:20392704..20392711,- | |||
}} | }} |
Latest revision as of 12:20, 28 July 2015
Short description: | p@chr20:20392704..20392711, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:20392704..20392711, - |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.55e-98 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.55e-98 | 2 |
cervix epithelium | 1.55e-98 | 2 |
uterine cervix | 4.27e-34 | 6 |
neck of organ | 4.27e-34 | 6 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.48e-40 | 5 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |