FFCP PHASE1:Hg19::chr20:19866814..19866842,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:19866814..19866842,+
|short_description=p9@RIN2
|description=CAGE_peak_9_at_RIN2_5end
|association_with_transcript=-322bp_to_ENST00000255006,NM_001242581_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |UniProt=Q8WYP3 | ||
|association_with_transcript=-322bp_to_ENST00000255006,NM_001242581_5end | |||
|cluster_id=chr20:19866814..19866842,+ | |||
|description=CAGE_peak_9_at_RIN2_5end | |||
|id=chr20:19866814..19866842,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.71e-19!24;CL:0000071!3.62e-15!18;CL:0002546!3.62e-15!18;CL:0000115!1.11e-13!35;CL:0002078!1.10e-09!44;CL:1000413!4.41e-09!9;CL:0000359!2.87e-08!32;CL:0000192!8.24e-08!42;CL:0000514!8.24e-08!42;CL:0000222!1.45e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.18e-22;24!CL:0000071;2.93e-21;18!CL:0000115;5.74e-16;36!CL:1000413;1.30e-14;9!CL:0000359;3.32e-10;32!CL:0002544;5.02e-10;6!CL:0002078;3.29e-09;45!CL:0002543;3.80e-07;6!CL:0002594;7.60e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.64e-22,24;CL:0000071,1.73e-21,18;CL:0002546,1.73e-21,18;CL:0000115,3.22e-18,36;CL:1000413,6.40e-15,9;CL:0002078,3.23e-13,45;CL:0000222,5.79e-11,121;CL:0000359,2.75e-10,32;CL:0002544,3.34e-10,6;CL:0000213,7.63e-09,58;CL:0000215,7.63e-09,58;CL:0000192,2.00e-07,43;CL:0000514,2.00e-07,43;CL:0002543,4.06e-07,6;CL:0002594,8.33e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;2.93e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.62e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.88e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.93e-21;18!UBERON:0001986;2.93e-21;18!UBERON:0004852;2.93e-21;18!UBERON:0000487;1.66e-16;22!UBERON:0001637;1.27e-14;42!UBERON:0003509;1.27e-14;42!UBERON:0004572;1.27e-14;42!UBERON:0003915;1.30e-14;9!UBERON:0004700;1.30e-14;9!UBERON:0001917;1.30e-14;9!UBERON:0006914;5.88e-14;25!UBERON:0007500;1.25e-12;56!UBERON:0001981;1.25e-12;56!UBERON:0004537;1.25e-12;56!UBERON:0004573;1.65e-12;33!UBERON:0004571;1.65e-12;33!UBERON:0000055;4.18e-12;65!UBERON:0001950;7.05e-12;20!UBERON:0000490;9.05e-12;33!UBERON:0002049;3.58e-11;75!UBERON:0007798;3.58e-11;75!UBERON:0001893;4.76e-11;34!UBERON:0002619;1.58e-10;22!UBERON:0003914;2.67e-10;74!UBERON:0002780;9.42e-10;41!UBERON:0001890;9.42e-10;41!UBERON:0002791;1.12e-09;32!UBERON:0001869;1.12e-09;32!UBERON:0000956;6.67e-09;25!UBERON:0000203;6.67e-09;25!UBERON:0000947;9.45e-09;21!UBERON:0010191;9.45e-09;21!UBERON:0002118;1.24e-08;5!UBERON:0003528;2.43e-08;34!UBERON:0002020;2.43e-08;34!UBERON:0000992;3.59e-07;13!UBERON:0001310;7.60e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.22e-25,68;UBERON:0007500,7.00e-25,59;UBERON:0001981,7.00e-25,59;UBERON:0004537,7.00e-25,59;UBERON:0006965,7.00e-25,59;UBERON:0002049,2.50e-23,78;UBERON:0007798,2.50e-23,78;UBERON:0000025,4.74e-23,192;UBERON:0004638,1.73e-21,18;UBERON:0001986,1.73e-21,18;UBERON:0004852,1.73e-21,18;UBERON:0004111,2.29e-20,240;UBERON:0001637,9.41e-20,42;UBERON:0003509,9.41e-20,42;UBERON:0004572,9.41e-20,42;UBERON:0000487,1.09e-16,22;UBERON:0004872,1.28e-15,83;UBERON:0003915,6.40e-15,9;UBERON:0004700,6.40e-15,9;UBERON:0001917,6.40e-15,9;UBERON:0000483,2.95e-14,306;UBERON:0004535,3.71e-14,109;UBERON:0006914,4.11e-14,25;UBERON:0000119,6.48e-14,309;UBERON:0001049,1.42e-13,56;UBERON:0005068,1.42e-13,56;UBERON:0006241,1.42e-13,56;UBERON:0007135,1.42e-13,56;UBERON:0001009,1.81e-13,112;UBERON:0002780,1.86e-13,41;UBERON:0001890,1.86e-13,41;UBERON:0003080,1.86e-13,41;UBERON:0006240,1.86e-13,41;UBERON:0003914,3.18e-13,117;UBERON:0004573,3.92e-13,33;UBERON:0004571,3.92e-13,33;UBERON:0001893,1.70e-12,34;UBERON:0003075,1.97e-12,82;UBERON:0007284,1.97e-12,82;UBERON:0003056,2.10e-12,61;UBERON:0001950,9.05e-12,20;UBERON:0002346,1.92e-11,86;UBERON:0000073,3.29e-11,53;UBERON:0002616,3.29e-11,53;UBERON:0001869,8.54e-11,32;UBERON:0002791,8.99e-11,32;UBERON:0002619,1.98e-10,22;UBERON:0000490,2.53e-10,148;UBERON:0003528,6.87e-10,34;UBERON:0002020,6.87e-10,34;UBERON:0001017,2.21e-09,81;UBERON:0000955,6.36e-09,68;UBERON:0006238,6.36e-09,68;UBERON:0000956,8.06e-09,25;UBERON:0000203,8.06e-09,25;UBERON:0002118,8.72e-09,5;UBERON:0000947,9.83e-09,21;UBERON:0010191,9.83e-09,21;UBERON:0010314,4.18e-08,132;UBERON:0010371,5.24e-08,104;UBERON:0001016,1.01e-07,89;UBERON:0007023,1.82e-07,114;UBERON:0000992,2.83e-07,13;UBERON:0000922,3.14e-07,592;UBERON:0001310,8.33e-07,4 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49778823507051,0.886917589850256,0.351339142772504,0.523916301990851,0,0,0,0,0,0,0,0,1.39133685156694,1.72046919021225,5.20710752411391,2.26123176769604,3.77549492588915,4.95212475492121,3.76190939766259,5.94358546089456,4.26919515224052,3.68192674041137,3.62546385398232,0.760272105718513,2.19655851793353,4.77962004449629,4.86085168729056,1.51809538082936,1.12264686313085,0.337834441449967,6.13266549863533,4.74632829784064,4.39684185432977,0,0,0,0,0.25326102332916,0.794455084879313,0.286836620748814,0,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0,2.18512053781224,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,3.25978839567199,0.109750285408626,0,0,0,0,0,1.44331342025273,7.18768510845476,0.352226082707465,0.866198686566443,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.503946384596579,0.850650583454319,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,1.02341449813341,0.321707842287215,1.48418066444991,1.54209693802656,1.9531789784444,2.54594183642808,1.03850885836724,2.90525946149898,0,6.01519410909855,0.0920809889358963,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,5.68666920354483,9.86543490603791,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.382838137483752,0,1.39453664789186,1.25924938732256,2.0911118104818,0.308033580176089,3.19383618190213,3.47973196830029,3.52116016297448,0.715624433709956,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,2.42618977887979,1.58510321173008,5.47635993110675,0,4.87426979262569,1.05650146756755,1.09199929126389,0.424216295861138,0,0,1.32687795048244,0.876901770507525,0.578775534266688,0.655894752046633,2.63783490051515,2.478587984798,1.12678241012897,0,0,2.85336841185,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0.86101074534246,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0.747768497892312,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,0.586032717087576,0,0,0.568272293612826,0,0,0,0.994147647766298,1.26602474769461,23.3748280548102,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0.179021174675609,0,0.197286811273867,0,0,1.93866549219044,0.74214478529481,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.964771509003264,0,0.663475559587348,0.591095237907095,1.09692698576986,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,1.99052386215701,9.99570478887733,0,0,0,0,1.68502832451693,0.802577647298789,0.937057782901357,0,0,0,1.18375320854817,1.20990716048664,0,0.31593289814244,0,0,1.32930774541437,1.323967823502,2.19753042885058,1.19472429772959,0,28.1509586216672,0,0,0.174118413160805,0.34945333648406,3.26773461696071,0,0,0,0.193978032976839,0,1.58186518546373,0.548167698587004,0,1.45614830698521,0,0.160317640503067,6.40358984218058,0,0,0,0,0.432164393964449,5.83986917157533,0,0,0,0,0,1.20084057741958,1.50595916781192,0,0.859530882839914,0,0.558564802544508,0.458320848023367,1.43574604915363,0.199679000498991,0.858452096273142,0.446342914883745,0.0671834724867263,0,0,0.0787831823072236,0.329663433524666,0.0674035438541849,2.06697711180972,0,0.795229689809303,0.817220436669454,0,0,0,0,0,1.03274246318642,0,2.75819975547194,0,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0,0.439656701034247,0,0.904980694530854,0.66116300871345,0.342173675768659,1.40963004463334,0.533937062838473,0,0,0,0,0,0,0.544017803369474,2.0055191521816,0,0,0,0,1.09823638411767,1.251909307065,1.72022758707021,0.887432412294818,1.4903136705932,0,3.12451019905266,0,0,11.9985568046068,0,0,0.298509605773748,0.233713309847224,0,0,0,0.889811221596536,0,0,0,1.18284119991707,3.34523211043775,0.449803112163605,3.10525913752519,0,0.53168342911599,2.60872530905867,0,1.52322084867518,1.62748293281865,2.54588122883583,2.47044281197723,3.24823631914946,5.97143833047924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,1.38258436151731,0,0,0,0,0,1.47918486351039,0,0,0,0,0.184105950251841,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.963438376446893,1.4169657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| ||
|short_description=p9@RIN2 | |||
}} | }} |
Latest revision as of 16:00, 24 September 2015
Short description: | p9@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -322bp_to_ENST00000255006, NM_001242581_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.64e-22 | 24 |
blood vessel endothelial cell | 1.73e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.73e-21 | 18 |
endothelial cell | 3.22e-18 | 36 |
endothelial cell of artery | 6.40e-15 | 9 |
meso-epithelial cell | 3.23e-13 | 45 |
mesodermal cell | 5.79e-11 | 121 |
vascular associated smooth muscle cell | 2.75e-10 | 32 |
aortic endothelial cell | 3.34e-10 | 6 |
lining cell | 7.63e-09 | 58 |
barrier cell | 7.63e-09 | 58 |
smooth muscle cell | 2.00e-07 | 43 |
smooth muscle myoblast | 2.00e-07 | 43 |
vein endothelial cell | 4.06e-07 | 6 |
smooth muscle cell of the umbilical artery | 8.33e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.88e-08 | 14 |