FFCP PHASE1:Hg19::chr5:121647877..121647913,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9627 | |EntrezGene=9627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11139 | |HGNC=11139 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6H5,D6REC1 | |UniProt=Q9Y6H5,D6REC1 | ||
|association_with_transcript=0bp_to_ENST00000261367,ENST00000514497_5end | |association_with_transcript=0bp_to_ENST00000261367,ENST00000514497_5end | ||
|cluster_id=chr5:121647877..121647913,+ | |||
|coexpression_cluster_id=C4453 | |coexpression_cluster_id=C4453 | ||
|description=CAGE_peak_1_at_SNCAIP_5end | |description=CAGE_peak_1_at_SNCAIP_5end | ||
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|ontology_enrichment_celltype=CL:0002139!3.38e-13!24;CL:0000115!4.99e-11!35;CL:0000071!2.44e-10!18;CL:0002546!2.44e-10!18;CL:0002078!1.03e-08!44 | |ontology_enrichment_celltype=CL:0002139!3.38e-13!24;CL:0000115!4.99e-11!35;CL:0000071!2.44e-10!18;CL:0002546!2.44e-10!18;CL:0002078!1.03e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.56e-15;24!CL:0000071;1.10e-12;18!CL:0000115;2.33e-11;36!CL:0002543;2.16e-07;6 | |ontology_enrichment_celltype_v019=CL:0002139;8.56e-15;24!CL:0000071;1.10e-12;18!CL:0000115;2.33e-11;36!CL:0002543;2.16e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.98e-15,24;CL:0000115,4.95e-14,36;CL:0000071,8.71e-13,18;CL:0002546,8.71e-13,18;CL:0002078,1.09e-09,45;CL:0002543,1.90e-07,6;CL:0000213,3.62e-07,58;CL:0000215,3.62e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.10e-12;18 | |ontology_enrichment_development_v019=CL:0002546;1.10e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.51e-18;32!UBERON:0001893;1.06e-17;34!UBERON:0002791;2.46e-17;32!UBERON:0000956;2.52e-17;25!UBERON:0000203;2.52e-17;25!UBERON:0003528;1.92e-16;34!UBERON:0002020;1.92e-16;34!UBERON:0002619;9.00e-15;22!UBERON:0002780;1.61e-14;41!UBERON:0001890;1.61e-14;41!UBERON:0000073;5.25e-13;53!UBERON:0002616;5.25e-13;53!UBERON:0001950;5.27e-13;20!UBERON:0004638;1.10e-12;18!UBERON:0001986;1.10e-12;18!UBERON:0004852;1.10e-12;18!UBERON:0001017;1.83e-11;75!UBERON:0000955;1.81e-10;68!UBERON:0001016;1.23e-09;83!UBERON:0000487;1.60e-09;22!UBERON:0007023;2.74e-08;114!UBERON:0006914;7.56e-08;25!UBERON:0000922;1.89e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0001869;1.51e-18;32!UBERON:0001893;1.06e-17;34!UBERON:0002791;2.46e-17;32!UBERON:0000956;2.52e-17;25!UBERON:0000203;2.52e-17;25!UBERON:0003528;1.92e-16;34!UBERON:0002020;1.92e-16;34!UBERON:0002619;9.00e-15;22!UBERON:0002780;1.61e-14;41!UBERON:0001890;1.61e-14;41!UBERON:0000073;5.25e-13;53!UBERON:0002616;5.25e-13;53!UBERON:0001950;5.27e-13;20!UBERON:0004638;1.10e-12;18!UBERON:0001986;1.10e-12;18!UBERON:0004852;1.10e-12;18!UBERON:0001017;1.83e-11;75!UBERON:0000955;1.81e-10;68!UBERON:0001016;1.23e-09;83!UBERON:0000487;1.60e-09;22!UBERON:0007023;2.74e-08;114!UBERON:0006914;7.56e-08;25!UBERON:0000922;1.89e-07;49 | ||
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| ||
|short_description=p1@SNCAIP | |short_description=p1@SNCAIP | ||
}} | }} |
Latest revision as of 23:37, 19 September 2015
Short description: | p1@SNCAIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNCAIP_5end |
Coexpression cluster: | C4453_occipital_Endothelial_parietal_temporal_uterus_sacrococcigeal_pharyngeal |
Association with transcript: | 0bp_to_ENST00000261367, ENST00000514497_5end |
EntrezGene: | SNCAIP |
HGNC: | 11139 |
UniProt: | Q9Y6H5D6REC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.98e-15 | 24 |
endothelial cell | 4.95e-14 | 36 |
blood vessel endothelial cell | 8.71e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.71e-13 | 18 |
meso-epithelial cell | 1.09e-09 | 45 |
vein endothelial cell | 1.90e-07 | 6 |
lining cell | 3.62e-07 | 58 |
barrier cell | 3.62e-07 | 58 |