FFCP PHASE1:Hg19::chr11:61099362..61099379,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1642 | |EntrezGene=1642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2717 | |HGNC=2717 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWI0 | |UniProt=F5GWI0 | ||
|association_with_transcript=478bp_to_ENST00000535283_5end | |association_with_transcript=478bp_to_ENST00000535283_5end | ||
|cluster_id=chr11:61099362..61099379,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_15_at_DDB1_5end | |description=CAGE_peak_15_at_DDB1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!7.92e-12!3;CL:0000039!7.71e-11!7;CL:0000586!7.71e-11!7;CL:0002574!5.72e-09!1 | |ontology_enrichment_celltype=CL:0002541!7.92e-12!3;CL:0000039!7.71e-11!7;CL:0000586!7.71e-11!7;CL:0002574!5.72e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000235;7.25e-08;6 | |ontology_enrichment_celltype_v019=CL:0000235;7.25e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!7.68e-18!2;UBERON:0002757!7.68e-18!2;UBERON:0010134!7.68e-18!2;UBERON:0002784!7.68e-18!2;UBERON:0005408!7.68e-18!2;UBERON:0001899!7.68e-18!2;UBERON:0000476!7.92e-12!3;UBERON:0000920!7.92e-12!3;UBERON:0003124!4.79e-11!7;UBERON:0000998!1.56e-09!1;UBERON:0006868!1.56e-09!1;UBERON:0003296!2.26e-09!4;UBERON:0010133!2.26e-09!4;UBERON:0001282!4.50e-09!1;UBERON:0009842!4.50e-09!1;UBERON:0003704!4.50e-09!1;UBERON:0001171!4.50e-09!1;UBERON:0001172!4.50e-09!1 | |ontology_enrichment_uberon=UBERON:0001905!7.68e-18!2;UBERON:0002757!7.68e-18!2;UBERON:0010134!7.68e-18!2;UBERON:0002784!7.68e-18!2;UBERON:0005408!7.68e-18!2;UBERON:0001899!7.68e-18!2;UBERON:0000476!7.92e-12!3;UBERON:0000920!7.92e-12!3;UBERON:0003124!4.79e-11!7;UBERON:0000998!1.56e-09!1;UBERON:0006868!1.56e-09!1;UBERON:0003296!2.26e-09!4;UBERON:0010133!2.26e-09!4;UBERON:0001282!4.50e-09!1;UBERON:0009842!4.50e-09!1;UBERON:0003704!4.50e-09!1;UBERON:0001171!4.50e-09!1;UBERON:0001172!4.50e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0000970,1.42e-08,21;UBERON:0002104,1.42e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.27e-07,24;UBERON:0001032,1.27e-07,24;UBERON:0004456,1.27e-07,24 | |||
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|short_description=p15@DDB1 | |short_description=p15@DDB1 | ||
}} | }} |
Latest revision as of 15:28, 18 September 2015
Short description: | p15@DDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_DDB1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 478bp_to_ENST00000535283_5end |
EntrezGene: | DDB1 |
HGNC: | 2717 |
UniProt: | F5GWI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
eye | 1.42e-08 | 21 |
visual system | 1.42e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.27e-07 | 24 |
sensory system | 1.27e-07 | 24 |
entire sense organ system | 1.27e-07 | 24 |