FFCP PHASE1:Hg19::chr3:46449205..46449218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9034 | |EntrezGene=9034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1612 | |HGNC=1612 | ||
|TSSclassifier=strong | |||
|UniProt=O00421 | |UniProt=O00421 | ||
|association_with_transcript=-153bp_to_ENST00000400882_5end | |association_with_transcript=-153bp_to_ENST00000400882_5end | ||
|cluster_id=chr3:46449205..46449218,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_10_at_CCRL2_5end | |description=CAGE_peak_10_at_CCRL2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!5.42e-114!42;CL:0000860!4.82e-106!45;CL:0002194!5.46e-73!63;CL:0000576!5.46e-73!63;CL:0000040!5.46e-73!63;CL:0000559!5.46e-73!63;CL:0002009!1.29e-70!65;CL:0000839!2.89e-65!70;CL:0000557!2.77e-64!71;CL:0000766!2.90e-64!76;CL:0000763!4.82e-42!112;CL:0000049!4.82e-42!112;CL:0002087!3.77e-39!119;CL:0000738!5.10e-35!140;CL:0002031!1.01e-34!124;CL:0000037!1.71e-27!172;CL:0000566!1.71e-27!172;CL:0002032!7.75e-27!165;CL:0000837!7.75e-27!165;CL:0000988!1.11e-25!182;CL:0000134!3.18e-10!358;CL:0002320!6.49e-10!365;CL:0000219!8.04e-09!390;CL:0000034!7.26e-08!444;CL:0000048!1.65e-07!430;CL:0000723!2.53e-07!436 | |ontology_enrichment_celltype=CL:0002057!5.42e-114!42;CL:0000860!4.82e-106!45;CL:0002194!5.46e-73!63;CL:0000576!5.46e-73!63;CL:0000040!5.46e-73!63;CL:0000559!5.46e-73!63;CL:0002009!1.29e-70!65;CL:0000839!2.89e-65!70;CL:0000557!2.77e-64!71;CL:0000766!2.90e-64!76;CL:0000763!4.82e-42!112;CL:0000049!4.82e-42!112;CL:0002087!3.77e-39!119;CL:0000738!5.10e-35!140;CL:0002031!1.01e-34!124;CL:0000037!1.71e-27!172;CL:0000566!1.71e-27!172;CL:0002032!7.75e-27!165;CL:0000837!7.75e-27!165;CL:0000988!1.11e-25!182;CL:0000134!3.18e-10!358;CL:0002320!6.49e-10!365;CL:0000219!8.04e-09!390;CL:0000034!7.26e-08!444;CL:0000048!1.65e-07!430;CL:0000723!2.53e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-112;33!CL:0002057;2.07e-112;33!CL:0000473;4.13e-75;39!CL:0000234;4.13e-75;39!CL:0000576;8.08e-52;48!CL:0000766;6.13e-28;69!CL:0000763;7.83e-17;100!CL:0002087;3.65e-16;104!CL:0000738;2.69e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.07e-112;33!CL:0002057;2.07e-112;33!CL:0000473;4.13e-75;39!CL:0000234;4.13e-75;39!CL:0000576;8.08e-52;48!CL:0000766;6.13e-28;69!CL:0000763;7.83e-17;100!CL:0002087;3.65e-16;104!CL:0000738;2.69e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.46e-96,42;CL:0002057,1.46e-96,42;CL:0000473,3.96e-84,48;CL:0000234,3.96e-84,48;CL:0002194,1.03e-66,59;CL:0000576,1.03e-66,59;CL:0000040,1.03e-66,59;CL:0000559,1.03e-66,59;CL:0002009,1.83e-64,61;CL:0000766,1.45e-59,72;CL:0000839,1.98e-59,66;CL:0000557,1.64e-58,67;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0002087,5.06e-33,115;CL:0002031,1.58e-31,120;CL:0000738,2.76e-30,136;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.83e-68;42!CL:0000049;1.00e-11;108 | |ontology_enrichment_development_v019=CL:0002057;8.83e-68;42!CL:0000049;1.00e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.52e-56!80;UBERON:0001474!2.85e-52!86;UBERON:0002390!1.60e-46!102;UBERON:0003061!1.60e-46!102;UBERON:0004765!8.71e-44!101;UBERON:0001434!8.71e-44!101;UBERON:0002193!6.43e-42!112;UBERON:0002405!7.65e-38!115;UBERON:0002204!2.03e-24!167;UBERON:0003081!3.94e-19!216;UBERON:0002384!1.72e-09!375;UBERON:0000926!6.18e-07!448;UBERON:0004120!6.18e-07!448;UBERON:0006603!6.18e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!1.52e-56!80;UBERON:0001474!2.85e-52!86;UBERON:0002390!1.60e-46!102;UBERON:0003061!1.60e-46!102;UBERON:0004765!8.71e-44!101;UBERON:0001434!8.71e-44!101;UBERON:0002193!6.43e-42!112;UBERON:0002405!7.65e-38!115;UBERON:0002204!2.03e-24!167;UBERON:0003081!3.94e-19!216;UBERON:0002384!1.72e-09!375;UBERON:0000926!6.18e-07!448;UBERON:0004120!6.18e-07!448;UBERON:0006603!6.18e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.56e-51,76;UBERON:0001474,2.18e-47,82;UBERON:0004765,5.95e-43,90;UBERON:0002405,1.75e-41,93;UBERON:0002390,3.13e-39,98;UBERON:0003061,3.13e-39,98;UBERON:0001434,2.16e-38,100;UBERON:0002193,2.41e-35,108;UBERON:0002204,8.30e-22,167;UBERON:0003081,2.24e-17,203;UBERON:0000926,5.27e-10,315;UBERON:0004120,5.27e-10,315;UBERON:0006603,5.27e-10,315;UBERON:0002384,5.20e-09,371 | |||
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|short_description=p10@CCRL2 | |short_description=p10@CCRL2 | ||
}} | }} |
Latest revision as of 11:08, 18 September 2015
Short description: | p10@CCRL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CCRL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -153bp_to_ENST00000400882_5end |
EntrezGene: | CCRL2 |
HGNC: | 1612 |
UniProt: | O00421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.46e-96 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-96 | 42 |
defensive cell | 3.96e-84 | 48 |
phagocyte | 3.96e-84 | 48 |
monopoietic cell | 1.03e-66 | 59 |
monocyte | 1.03e-66 | 59 |
monoblast | 1.03e-66 | 59 |
promonocyte | 1.03e-66 | 59 |
macrophage dendritic cell progenitor | 1.83e-64 | 61 |
myeloid leukocyte | 1.45e-59 | 72 |
myeloid lineage restricted progenitor cell | 1.98e-59 | 66 |
granulocyte monocyte progenitor cell | 1.64e-58 | 67 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
nongranular leukocyte | 5.06e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 1.58e-31 | 120 |
leukocyte | 2.76e-30 | 136 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.56e-51 | 76 |
bone element | 2.18e-47 | 82 |
skeletal element | 5.95e-43 | 90 |
immune system | 1.75e-41 | 93 |
hematopoietic system | 3.13e-39 | 98 |
blood island | 3.13e-39 | 98 |
skeletal system | 2.16e-38 | 100 |
hemolymphoid system | 2.41e-35 | 108 |
musculoskeletal system | 8.30e-22 | 167 |
lateral plate mesoderm | 2.24e-17 | 203 |
mesoderm | 5.27e-10 | 315 |
mesoderm-derived structure | 5.27e-10 | 315 |
presumptive mesoderm | 5.27e-10 | 315 |
connective tissue | 5.20e-09 | 371 |