FFCP PHASE1:Hg19::chr16:58663720..58663753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23019 | |EntrezGene=23019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7877 | |HGNC=7877 | ||
|TSSclassifier=strong | |||
|UniProt=A5YKK6,F8WA87,B3KPW6 | |UniProt=A5YKK6,F8WA87,B3KPW6 | ||
|association_with_transcript=0bp_to_ENST00000317147,ENST00000394200,ENST00000422872,ENST00000441024,NM_016284,NM_206999,uc002enu.3,uc002env.2,uc002enw.2,uc002enx.2,uc002enz.1_5end | |association_with_transcript=0bp_to_ENST00000317147,ENST00000394200,ENST00000422872,ENST00000441024,NM_016284,NM_206999,uc002enu.3,uc002env.2,uc002enw.2,uc002enx.2,uc002enz.1_5end | ||
|cluster_id=chr16:58663720..58663753,- | |||
|description=CAGE_peak_1_at_CNOT1_5end | |description=CAGE_peak_1_at_CNOT1_5end | ||
|id=chr16:58663720..58663753,- | |id=chr16:58663720..58663753,- | ||
|ontology_enrichment_celltype=CL:0000037!9.91e-44!172;CL:0000566!9.91e-44!172;CL:0002032!1.16e-41!165;CL:0000837!1.16e-41!165;CL:0000988!2.90e-38!182;CL:0000738!2.76e-37!140;CL:0002031!1.41e-32!124;CL:0002087!5.11e-32!119;CL:0000763!1.41e-26!112;CL:0000049!1.41e-26!112;CL:0000766!5.42e-20!76;CL:0000557!3.84e-19!71;CL:0000839!1.68e-18!70;CL:0002009!7.82e-18!65;CL:0002194!2.82e-17!63;CL:0000576!2.82e-17!63;CL:0000040!2.82e-17!63;CL:0000559!2.82e-17!63;CL:0000860!3.48e-15!45;CL:0002057!4.39e-14!42;CL:0000542!2.06e-13!53;CL:0000051!2.06e-13!53;CL:0000838!3.70e-13!52;CL:0000945!6.50e-07!24;CL:0000826!6.50e-07!24 | |ontology_enrichment_celltype=CL:0000037!9.91e-44!172;CL:0000566!9.91e-44!172;CL:0002032!1.16e-41!165;CL:0000837!1.16e-41!165;CL:0000988!2.90e-38!182;CL:0000738!2.76e-37!140;CL:0002031!1.41e-32!124;CL:0002087!5.11e-32!119;CL:0000763!1.41e-26!112;CL:0000049!1.41e-26!112;CL:0000766!5.42e-20!76;CL:0000557!3.84e-19!71;CL:0000839!1.68e-18!70;CL:0002009!7.82e-18!65;CL:0002194!2.82e-17!63;CL:0000576!2.82e-17!63;CL:0000040!2.82e-17!63;CL:0000559!2.82e-17!63;CL:0000860!3.48e-15!45;CL:0002057!4.39e-14!42;CL:0000542!2.06e-13!53;CL:0000051!2.06e-13!53;CL:0000838!3.70e-13!52;CL:0000945!6.50e-07!24;CL:0000826!6.50e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-13;33!CL:0002057;1.27e-13;33!CL:0000473;7.71e-12;39!CL:0000234;7.71e-12;39!CL:0000576;3.49e-11;48!CL:0002087;1.13e-10;104!CL:0000738;1.17e-08;136!CL:0000766;1.65e-08;69!CL:0000763;2.61e-08;100!CL:0000988;6.86e-08;177!CL:0000542;7.03e-08;53!CL:0000945;6.50e-07;24 | |ontology_enrichment_celltype_v019=CL:0000860;1.27e-13;33!CL:0002057;1.27e-13;33!CL:0000473;7.71e-12;39!CL:0000234;7.71e-12;39!CL:0000576;3.49e-11;48!CL:0002087;1.13e-10;104!CL:0000738;1.17e-08;136!CL:0000766;1.65e-08;69!CL:0000763;2.61e-08;100!CL:0000988;6.86e-08;177!CL:0000542;7.03e-08;53!CL:0000945;6.50e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.14e-43,168;CL:0002032,8.00e-41,161;CL:0000837,8.00e-41,161;CL:0000988,2.85e-38,177;CL:0000738,1.64e-36,136;CL:0002031,7.64e-32,120;CL:0002087,2.68e-31,115;CL:0000763,7.25e-26,108;CL:0000049,7.25e-26,108;CL:0000766,2.30e-19,72;CL:0000557,1.58e-18,67;CL:0000839,6.92e-18,66;CL:0002009,3.11e-17,61;CL:0002194,1.11e-16,59;CL:0000576,1.11e-16,59;CL:0000040,1.11e-16,59;CL:0000559,1.11e-16,59;CL:0000473,1.42e-14,48;CL:0000234,1.42e-14,48;CL:0000860,4.39e-14,42;CL:0002057,4.39e-14,42;CL:0000542,2.06e-13,53;CL:0000051,2.06e-13,53;CL:0000838,3.70e-13,52;CL:0000945,6.50e-07,24;CL:0000826,6.50e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-10;42!CL:0000051;7.03e-08;53!CL:0000049;7.54e-08;108 | |ontology_enrichment_development_v019=CL:0002057;1.30e-10;42!CL:0000051;7.03e-08;53!CL:0000049;7.54e-08;108 | ||
|ontology_enrichment_disease=DOID:162!2.53e-13!235;DOID:14566!3.39e-12!239;DOID:0050687!2.43e-09!143;DOID:2531!6.78e-09!51;DOID:0060083!6.78e-09!51;DOID:1240!1.51e-08!39;DOID:305!1.67e-08!106;DOID:0050686!5.05e-08!137 | |ontology_enrichment_disease=DOID:162!2.53e-13!235;DOID:14566!3.39e-12!239;DOID:0050687!2.43e-09!143;DOID:2531!6.78e-09!51;DOID:0060083!6.78e-09!51;DOID:1240!1.51e-08!39;DOID:305!1.67e-08!106;DOID:0050686!5.05e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.25e-07;39 | |ontology_enrichment_disease_v019=DOID:1240;3.25e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.53e-13,235;DOID:14566,3.39e-12,239;DOID:0050687,2.43e-09,143;DOID:2531,6.78e-09,51;DOID:0060083,6.78e-09,51;DOID:1240,1.51e-08,39;DOID:305,1.67e-08,106;DOID:0050686,5.05e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.62e-18!102;UBERON:0003061!5.62e-18!102;UBERON:0002193!4.33e-15!112;UBERON:0002371!7.73e-14!80;UBERON:0001474!2.87e-13!86;UBERON:0002405!2.60e-12!115;UBERON:0004765!3.34e-09!101;UBERON:0001434!3.34e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!5.62e-18!102;UBERON:0003061!5.62e-18!102;UBERON:0002193!4.33e-15!112;UBERON:0002371!7.73e-14!80;UBERON:0001474!2.87e-13!86;UBERON:0002405!2.60e-12!115;UBERON:0004765!3.34e-09!101;UBERON:0001434!3.34e-09!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.71e-17,98;UBERON:0003061,2.71e-17,98;UBERON:0002193,2.02e-14,108;UBERON:0002371,3.44e-13,76;UBERON:0001474,1.28e-12,82;UBERON:0002405,1.78e-12,93;UBERON:0004765,5.86e-10,90;UBERON:0001434,7.14e-08,100 | |||
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| ||
|short_description=p1@CNOT1 | |short_description=p1@CNOT1 | ||
}} | }} |
Latest revision as of 06:23, 17 September 2015
Short description: | p1@CNOT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNOT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000317147, ENST00000394200, ENST00000422872, ENST00000441024, NM_016284, NM_206999, uc002enu.3, uc002env.2, uc002enw.2, uc002enx.2, uc002enz.1_5end |
EntrezGene: | CNOT1 |
HGNC: | 7877 |
UniProt: | A5YKK6F8WA87B3KPW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.14e-43 | 168 |
hematopoietic oligopotent progenitor cell | 8.00e-41 | 161 |
hematopoietic multipotent progenitor cell | 8.00e-41 | 161 |
hematopoietic cell | 2.85e-38 | 177 |
leukocyte | 1.64e-36 | 136 |
hematopoietic lineage restricted progenitor cell | 7.64e-32 | 120 |
nongranular leukocyte | 2.68e-31 | 115 |
myeloid cell | 7.25e-26 | 108 |
common myeloid progenitor | 7.25e-26 | 108 |
myeloid leukocyte | 2.30e-19 | 72 |
granulocyte monocyte progenitor cell | 1.58e-18 | 67 |
myeloid lineage restricted progenitor cell | 6.92e-18 | 66 |
macrophage dendritic cell progenitor | 3.11e-17 | 61 |
monopoietic cell | 1.11e-16 | 59 |
monocyte | 1.11e-16 | 59 |
monoblast | 1.11e-16 | 59 |
promonocyte | 1.11e-16 | 59 |
defensive cell | 1.42e-14 | 48 |
phagocyte | 1.42e-14 | 48 |
classical monocyte | 4.39e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.39e-14 | 42 |
lymphocyte | 2.06e-13 | 53 |
common lymphoid progenitor | 2.06e-13 | 53 |
lymphoid lineage restricted progenitor cell | 3.70e-13 | 52 |
lymphocyte of B lineage | 6.50e-07 | 24 |
pro-B cell | 6.50e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.71e-17 | 98 |
blood island | 2.71e-17 | 98 |
hemolymphoid system | 2.02e-14 | 108 |
bone marrow | 3.44e-13 | 76 |
bone element | 1.28e-12 | 82 |
immune system | 1.78e-12 | 93 |
skeletal element | 5.86e-10 | 90 |
skeletal system | 7.14e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.53e-13 | 235 |
disease of cellular proliferation | 3.39e-12 | 239 |
cell type cancer | 2.43e-09 | 143 |
hematologic cancer | 6.78e-09 | 51 |
immune system cancer | 6.78e-09 | 51 |
leukemia | 1.51e-08 | 39 |
carcinoma | 1.67e-08 | 106 |
organ system cancer | 5.05e-08 | 137 |