FFCP PHASE1:Hg19::chrX:37765335..37765354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000449263_5end | |association_with_transcript=-45bp_to_ENST00000449263_5end | ||
|cluster_id=chrX:37765335..37765354,+ | |||
|coexpression_cluster_id=C4871 | |coexpression_cluster_id=C4871 | ||
|description=CAGE_peak_5_at_ENST00000449263_5end | |description=CAGE_peak_5_at_ENST00000449263_5end | ||
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|ontology_enrichment_celltype=CL:0000133!3.92e-08!59;CL:0002319!9.80e-08!25;CL:0000128!1.05e-07!7;CL:0000126!1.05e-07!7;CL:0000127!1.05e-07!7;CL:0002453!1.05e-07!7;CL:0000147!3.37e-07!14 | |ontology_enrichment_celltype=CL:0000133!3.92e-08!59;CL:0002319!9.80e-08!25;CL:0000128!1.05e-07!7;CL:0000126!1.05e-07!7;CL:0000127!1.05e-07!7;CL:0002453!1.05e-07!7;CL:0000147!3.37e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.18e-20;3!CL:0000149;1.23e-15;4!CL:0000047;5.99e-14;2!CL:0000128;6.04e-09;7!CL:0000126;6.04e-09;7!CL:0000127;6.04e-09;7!CL:0002319;4.08e-08;25!CL:0000147;8.67e-08;14!CL:0002174;1.18e-07;1!CL:0000501;1.18e-07;1!CL:0000306;3.03e-07;4!CL:0002222;3.03e-07;4!CL:0002224;3.03e-07;4 | |ontology_enrichment_celltype_v019=CL:0002586;1.18e-20;3!CL:0000149;1.23e-15;4!CL:0000047;5.99e-14;2!CL:0000128;6.04e-09;7!CL:0000126;6.04e-09;7!CL:0000127;6.04e-09;7!CL:0002319;4.08e-08;25!CL:0000147;8.67e-08;14!CL:0002174;1.18e-07;1!CL:0000501;1.18e-07;1!CL:0000306;3.03e-07;4!CL:0002222;3.03e-07;4!CL:0002224;3.03e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.11e-20,3;CL:0000149,1.17e-15,4;CL:0000128,4.35e-09,7;CL:0000126,4.35e-09,7;CL:0000127,4.35e-09,7;CL:0002453,4.35e-09,7;CL:0002319,3.80e-08,25;CL:0000147,8.45e-08,14;CL:0002174,1.26e-07,1;CL:0000501,1.26e-07,1;CL:0000306,2.20e-07,4;CL:0002222,2.20e-07,4;CL:0002224,2.20e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;3.03e-07;4!DOID:1612;3.03e-07;4 | |ontology_enrichment_disease_v019=DOID:5093;3.03e-07;4!DOID:1612;3.03e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.42e-07,4;DOID:1612,2.42e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.82e-21!86;UBERON:0000073!3.91e-20!94;UBERON:0001016!3.91e-20!94;UBERON:0002346!8.62e-18!90;UBERON:0001017!1.61e-17!82;UBERON:0003075!4.16e-16!86;UBERON:0007284!4.16e-16!86;UBERON:0000924!2.60e-15!173;UBERON:0006601!2.60e-15!173;UBERON:0004121!6.14e-14!169;UBERON:0007625!2.40e-13!11;UBERON:0003056!4.20e-13!61;UBERON:0000955!4.85e-11!69;UBERON:0006238!4.85e-11!69;UBERON:0001049!4.93e-11!57;UBERON:0005068!4.93e-11!57;UBERON:0006241!4.93e-11!57;UBERON:0007135!4.93e-11!57;UBERON:0000153!1.44e-10!129;UBERON:0007811!1.44e-10!129;UBERON:0000033!2.34e-10!123;UBERON:0002616!2.41e-10!59;UBERON:0002020!5.31e-10!34;UBERON:0003528!5.31e-10!34;UBERON:0001869!1.24e-09!32;UBERON:0002791!3.34e-09!33;UBERON:0001893!8.47e-09!34;UBERON:0000019!4.76e-08!19;UBERON:0000047!4.76e-08!19;UBERON:0004088!4.76e-08!19;UBERON:0003072!4.76e-08!19;UBERON:0003071!4.76e-08!19;UBERON:0004128!4.76e-08!19;UBERON:0000956!8.49e-08!25;UBERON:0000203!8.49e-08!25;UBERON:0000970!1.69e-07!20;UBERON:0002780!2.54e-07!41;UBERON:0001890!2.54e-07!41;UBERON:0006240!2.54e-07!41;UBERON:0005174!4.28e-07!5;UBERON:0001137!4.28e-07!5;UBERON:0000475!4.57e-07!365;UBERON:0003080!4.87e-07!42;UBERON:0002104!5.28e-07!21;UBERON:0001456!5.28e-07!21 | |ontology_enrichment_uberon=UBERON:0005743!2.82e-21!86;UBERON:0000073!3.91e-20!94;UBERON:0001016!3.91e-20!94;UBERON:0002346!8.62e-18!90;UBERON:0001017!1.61e-17!82;UBERON:0003075!4.16e-16!86;UBERON:0007284!4.16e-16!86;UBERON:0000924!2.60e-15!173;UBERON:0006601!2.60e-15!173;UBERON:0004121!6.14e-14!169;UBERON:0007625!2.40e-13!11;UBERON:0003056!4.20e-13!61;UBERON:0000955!4.85e-11!69;UBERON:0006238!4.85e-11!69;UBERON:0001049!4.93e-11!57;UBERON:0005068!4.93e-11!57;UBERON:0006241!4.93e-11!57;UBERON:0007135!4.93e-11!57;UBERON:0000153!1.44e-10!129;UBERON:0007811!1.44e-10!129;UBERON:0000033!2.34e-10!123;UBERON:0002616!2.41e-10!59;UBERON:0002020!5.31e-10!34;UBERON:0003528!5.31e-10!34;UBERON:0001869!1.24e-09!32;UBERON:0002791!3.34e-09!33;UBERON:0001893!8.47e-09!34;UBERON:0000019!4.76e-08!19;UBERON:0000047!4.76e-08!19;UBERON:0004088!4.76e-08!19;UBERON:0003072!4.76e-08!19;UBERON:0003071!4.76e-08!19;UBERON:0004128!4.76e-08!19;UBERON:0000956!8.49e-08!25;UBERON:0000203!8.49e-08!25;UBERON:0000970!1.69e-07!20;UBERON:0002780!2.54e-07!41;UBERON:0001890!2.54e-07!41;UBERON:0006240!2.54e-07!41;UBERON:0005174!4.28e-07!5;UBERON:0001137!4.28e-07!5;UBERON:0000475!4.57e-07!365;UBERON:0003080!4.87e-07!42;UBERON:0002104!5.28e-07!21;UBERON:0001456!5.28e-07!21 | ||
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| ||
|short_description=p5@ENST00000449263 | |short_description=p5@ENST00000449263 | ||
}} | }} |
Latest revision as of 07:56, 1 August 2015
Short description: | p5@ENST00000449263 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000449263_5end |
Coexpression cluster: | C4871_Mesenchymal_astrocytoma_tubular_melanoma_Prostate_MCF7_mesenchymal |
Association with transcript: | -45bp_to_ENST00000449263_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.11e-20 | 3 |
visual pigment cell | 1.17e-15 | 4 |
oligodendrocyte | 4.35e-09 | 7 |
macroglial cell | 4.35e-09 | 7 |
astrocyte | 4.35e-09 | 7 |
oligodendrocyte precursor cell | 4.35e-09 | 7 |
neural cell | 3.80e-08 | 25 |
pigment cell | 8.45e-08 | 14 |
follicular cell of ovary | 1.26e-07 | 1 |
granulosa cell | 1.26e-07 | 1 |
crystallin accumulating cell | 2.20e-07 | 4 |
vertebrate lens cell | 2.20e-07 | 4 |
lens epithelial cell | 2.20e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 7.94e-21 | 11 |
pigmented layer of retina | 1.11e-20 | 3 |
presumptive retinal pigmented epithelium | 1.11e-20 | 3 |
layer of retina | 1.17e-15 | 4 |
camera-type eye | 3.15e-11 | 20 |
simple eye | 3.15e-11 | 20 |
immature eye | 3.15e-11 | 20 |
ocular region | 3.15e-11 | 20 |
eyeball of camera-type eye | 3.15e-11 | 20 |
optic cup | 3.15e-11 | 20 |
optic vesicle | 3.15e-11 | 20 |
eye primordium | 3.15e-11 | 20 |
eye | 1.15e-10 | 21 |
visual system | 1.15e-10 | 21 |
retina | 1.31e-10 | 6 |
photoreceptor array | 1.31e-10 | 6 |
posterior segment of eyeball | 1.31e-10 | 6 |
face | 3.70e-10 | 22 |
sense organ | 2.88e-09 | 24 |
sensory system | 2.88e-09 | 24 |
entire sense organ system | 2.88e-09 | 24 |
cuboidal epithelium | 2.20e-07 | 4 |
transparent eye structure | 2.20e-07 | 4 |
simple cuboidal epithelium | 2.20e-07 | 4 |
cranial placode | 2.20e-07 | 4 |
lens of camera-type eye | 2.20e-07 | 4 |
epithelium of lens | 2.20e-07 | 4 |
lens placode | 2.20e-07 | 4 |
lens vesicle | 2.20e-07 | 4 |
rectum | 3.03e-07 | 4 |
ectodermal placode | 4.75e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.42e-07 | 4 |
breast cancer | 2.42e-07 | 4 |