FFCP PHASE1:Hg19::chr15:81173239..81173250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:81173239..81173250,+ | |||
|coexpression_cluster_id=C387 | |coexpression_cluster_id=C387 | ||
|description=CAGE_peak_at_chr15:81173239..81173250,+ | |description=CAGE_peak_at_chr15:81173239..81173250,+ | ||
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|ontology_enrichment_celltype_v019=CL:0002334;1.01e-42;12!CL:0002579;1.49e-32;3!CL:0002580;2.82e-32;3!CL:0002615;5.88e-15;3!CL:0000136;2.93e-13;13!CL:0002581;2.63e-12;1!CL:0002616;5.04e-12;1!CL:0000511;1.13e-11;1!CL:0002625;1.13e-11;1!CL:0000216;1.13e-11;1 | |ontology_enrichment_celltype_v019=CL:0002334;1.01e-42;12!CL:0002579;1.49e-32;3!CL:0002580;2.82e-32;3!CL:0002615;5.88e-15;3!CL:0000136;2.93e-13;13!CL:0002581;2.63e-12;1!CL:0002616;5.04e-12;1!CL:0000511;1.13e-11;1!CL:0002625;1.13e-11;1!CL:0000216;1.13e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.15e-42,12;CL:0002579,1.41e-32,3;CL:0002580,3.69e-32,3;CL:0000057,3.48e-15,76;CL:0002615,6.10e-15,3;CL:0002581,2.63e-12,1;CL:0002616,5.05e-12,1;CL:0000511,1.19e-11,1;CL:0002625,1.19e-11,1;CL:0000216,1.19e-11,1;CL:0000136,1.71e-11,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003688;6.87e-44;6!UBERON:0002358;6.87e-44;6!UBERON:0003684;6.87e-44;6!UBERON:0001178;6.87e-44;6!UBERON:0004457;2.71e-29;9!UBERON:0000042;2.71e-29;9!UBERON:0005406;1.49e-22;2!UBERON:0000310;3.26e-17;10!UBERON:0001443;1.13e-15;11!UBERON:0001136;1.13e-11;1!UBERON:0001343;1.13e-11;1!UBERON:0004910;1.13e-11;1!UBERON:0004813;1.13e-11;1!UBERON:0002323;3.57e-07;45 | |ontology_enrichment_uberon_v019=UBERON:0003688;6.87e-44;6!UBERON:0002358;6.87e-44;6!UBERON:0003684;6.87e-44;6!UBERON:0001178;6.87e-44;6!UBERON:0004457;2.71e-29;9!UBERON:0000042;2.71e-29;9!UBERON:0005406;1.49e-22;2!UBERON:0000310;3.26e-17;10!UBERON:0001443;1.13e-15;11!UBERON:0001136;1.13e-11;1!UBERON:0001343;1.13e-11;1!UBERON:0004910;1.13e-11;1!UBERON:0004813;1.13e-11;1!UBERON:0002323;3.57e-07;45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.89e-44,6;UBERON:0002358,6.89e-44,6;UBERON:0003684,6.89e-44,6;UBERON:0001178,6.89e-44,6;UBERON:0005406,1.49e-22,2;UBERON:0004457,5.60e-22,12;UBERON:0000042,5.60e-22,12;UBERON:0000310,3.94e-17,10;UBERON:0001443,1.34e-15,11;UBERON:0001136,1.19e-11,1;UBERON:0001343,1.19e-11,1;UBERON:0004910,1.19e-11,1;UBERON:0005154,1.19e-11,1;UBERON:0005295,1.19e-11,1;UBERON:0004813,1.19e-11,1;UBERON:0005297,1.19e-11,1;UBERON:0005294,1.19e-11,1;UBERON:0010141,1.19e-11,1;UBERON:0005891,1.19e-11,1;UBERON:0002323,7.31e-08,46;UBERON:0004458,2.36e-07,49;UBERON:0004923,3.67e-07,66 | |||
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| ||
|short_description=p@chr15:81173239..81173250,+ | |short_description=p@chr15:81173239..81173250,+ | ||
}} | }} |
Latest revision as of 04:48, 25 July 2015
Short description: | p@chr15:81173239..81173250, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81173239..81173250, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.15e-42 | 12 |
omentum preadipocyte | 1.41e-32 | 3 |
preadipocyte of the breast | 3.69e-32 | 3 |
fibroblast | 3.48e-15 | 76 |
adipocyte of omentum tissue | 6.10e-15 | 3 |
perirenal preadipocyte | 2.63e-12 | 1 |
perirenal adipocyte cell | 5.05e-12 | 1 |
androgen binding protein secreting cell | 1.19e-11 | 1 |
seminiferous tubule epithelial cell | 1.19e-11 | 1 |
Sertoli cell | 1.19e-11 | 1 |
fat cell | 1.71e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.89e-44 | 6 |
peritoneum | 6.89e-44 | 6 |
abdominal cavity | 6.89e-44 | 6 |
visceral peritoneum | 6.89e-44 | 6 |
perirenal fat | 1.49e-22 | 2 |
cavity lining | 5.60e-22 | 12 |
serous membrane | 5.60e-22 | 12 |
breast | 3.94e-17 | 10 |
chest | 1.34e-15 | 11 |
mesothelium | 1.19e-11 | 1 |
seminiferous tubule of testis | 1.19e-11 | 1 |
epithelium of male gonad | 1.19e-11 | 1 |
epithelial cord | 1.19e-11 | 1 |
sex cord | 1.19e-11 | 1 |
seminiferous tubule epithelium | 1.19e-11 | 1 |
testis sex cord | 1.19e-11 | 1 |
genital ridge | 1.19e-11 | 1 |
primitive sex cord of indifferent gonad | 1.19e-11 | 1 |
coelomic epithelium | 1.19e-11 | 1 |
body cavity | 7.31e-08 | 46 |
body cavity or lining | 2.36e-07 | 49 |
organ component layer | 3.67e-07 | 66 |