FFCP PHASE1:Hg19::chr17:27382155..27382164,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27382155..27382164,+ | |||
|coexpression_cluster_id=C377 | |coexpression_cluster_id=C377 | ||
|description=CAGE_peak_at_chr17:27382155..27382164,+ | |description=CAGE_peak_at_chr17:27382155..27382164,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;5.89e-20;14 | |ontology_enrichment_disease_v019=DOID:3119;5.89e-20;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,5.89e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0000988!1.13e-18!3;UBERON:0002148!2.64e-13!2;UBERON:0009662!2.64e-13!2;UBERON:0004733!1.36e-12!12;UBERON:0002028!1.36e-12!12;UBERON:0007277!1.36e-12!12;UBERON:0002298!2.56e-12!8;UBERON:0004732!1.32e-11!13;UBERON:0002680!4.55e-11!9;UBERON:0001895!4.55e-11!9;UBERON:0010092!4.55e-11!9;UBERON:0003076!4.97e-10!15;UBERON:0003057!4.97e-10!15;UBERON:0006331!3.67e-09!3;UBERON:0000073!4.90e-08!94;UBERON:0001016!4.90e-08!94;UBERON:0002336!2.66e-07!1;UBERON:0001018!2.66e-07!1;UBERON:0002473!2.66e-07!1;UBERON:0005340!2.66e-07!1;UBERON:0002316!2.66e-07!1;UBERON:0003544!2.66e-07!1;UBERON:0001020!2.66e-07!1;UBERON:0005970!2.66e-07!1;UBERON:0002437!2.66e-07!1 | |ontology_enrichment_uberon=UBERON:0000988!1.13e-18!3;UBERON:0002148!2.64e-13!2;UBERON:0009662!2.64e-13!2;UBERON:0004733!1.36e-12!12;UBERON:0002028!1.36e-12!12;UBERON:0007277!1.36e-12!12;UBERON:0002298!2.56e-12!8;UBERON:0004732!1.32e-11!13;UBERON:0002680!4.55e-11!9;UBERON:0001895!4.55e-11!9;UBERON:0010092!4.55e-11!9;UBERON:0003076!4.97e-10!15;UBERON:0003057!4.97e-10!15;UBERON:0006331!3.67e-09!3;UBERON:0000073!4.90e-08!94;UBERON:0001016!4.90e-08!94;UBERON:0002336!2.66e-07!1;UBERON:0001018!2.66e-07!1;UBERON:0002473!2.66e-07!1;UBERON:0005340!2.66e-07!1;UBERON:0002316!2.66e-07!1;UBERON:0003544!2.66e-07!1;UBERON:0001020!2.66e-07!1;UBERON:0005970!2.66e-07!1;UBERON:0002437!2.66e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;4.09e-23;2!UBERON:0002108;1.83e-14;4 | |ontology_enrichment_uberon_v019=UBERON:0002114;4.09e-23;2!UBERON:0002108;1.83e-14;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,4.09e-23,2;UBERON:0002108,1.83e-14,4 | |||
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|short_description=p@chr17:27382155..27382164,+ | |short_description=p@chr17:27382155..27382164,+ | ||
}} | }} |
Latest revision as of 15:07, 25 July 2015
Short description: | p@chr17:27382155..27382164, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27382155..27382164, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duodenum | 4.09e-23 | 2 |
small intestine | 1.83e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.89e-20 | 14 |