FFCP PHASE1:Hg19::chr5:156887244..156887258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348938 | |EntrezGene=348938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28018 | |HGNC=28018 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000519150_5end | |association_with_transcript=-4bp_to_ENST00000519150_5end | ||
|cluster_id=chr5:156887244..156887258,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_2_at_NIPAL4_5end | |description=CAGE_peak_2_at_NIPAL4_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.28e-25!42;CL:0000860!1.78e-22!45;CL:0002009!8.35e-21!65;CL:0000766!2.88e-20!76;CL:0002194!1.84e-19!63;CL:0000576!1.84e-19!63;CL:0000040!1.84e-19!63;CL:0000559!1.84e-19!63;CL:0000557!1.39e-18!71;CL:0000738!8.60e-17!140;CL:0000839!7.39e-16!70;CL:0002087!1.01e-14!119;CL:0002031!7.36e-13!124;CL:0000988!9.27e-11!182;CL:0000763!1.25e-10!112;CL:0000049!1.25e-10!112;CL:0000037!2.34e-10!172;CL:0000566!2.34e-10!172;CL:0002032!3.20e-09!165;CL:0000837!3.20e-09!165;CL:0002076!3.51e-07!43 | |ontology_enrichment_celltype=CL:0002057!3.28e-25!42;CL:0000860!1.78e-22!45;CL:0002009!8.35e-21!65;CL:0000766!2.88e-20!76;CL:0002194!1.84e-19!63;CL:0000576!1.84e-19!63;CL:0000040!1.84e-19!63;CL:0000559!1.84e-19!63;CL:0000557!1.39e-18!71;CL:0000738!8.60e-17!140;CL:0000839!7.39e-16!70;CL:0002087!1.01e-14!119;CL:0002031!7.36e-13!124;CL:0000988!9.27e-11!182;CL:0000763!1.25e-10!112;CL:0000049!1.25e-10!112;CL:0000037!2.34e-10!172;CL:0000566!2.34e-10!172;CL:0002032!3.20e-09!165;CL:0000837!3.20e-09!165;CL:0002076!3.51e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.92e-37;33!CL:0002057;7.92e-37;33!CL:0000473;4.48e-30;39!CL:0000234;4.48e-30;39!CL:0000576;2.44e-19;48!CL:0000766;2.25e-14;69!CL:0000244;5.32e-08;4!CL:0000731;5.32e-08;4!CL:0002087;5.73e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;7.92e-37;33!CL:0002057;7.92e-37;33!CL:0000473;4.48e-30;39!CL:0000234;4.48e-30;39!CL:0000576;2.44e-19;48!CL:0000766;2.25e-14;69!CL:0000244;5.32e-08;4!CL:0000731;5.32e-08;4!CL:0002087;5.73e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.49e-37,42;CL:0002057,3.49e-37,42;CL:0000473,4.92e-37,48;CL:0000234,4.92e-37,48;CL:0002009,4.49e-31,61;CL:0000766,4.26e-29,72;CL:0002194,8.02e-29,59;CL:0000576,8.02e-29,59;CL:0000040,8.02e-29,59;CL:0000559,8.02e-29,59;CL:0000557,1.10e-28,67;CL:0000839,1.50e-24,66;CL:0000738,1.32e-18,136;CL:0000763,3.45e-18,108;CL:0000049,3.45e-18,108;CL:0002087,3.69e-16,115;CL:0002031,4.21e-15,120;CL:0000037,5.90e-13,168;CL:0000988,3.17e-12,177;CL:0002032,4.53e-12,161;CL:0000837,4.53e-12,161;CL:0000244,5.39e-08,4;CL:0000731,5.39e-08,4 | |||
|ontology_enrichment_development_v019=CL:0002057;4.37e-28;42 | |ontology_enrichment_development_v019=CL:0002057;4.37e-28;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-14!80;UBERON:0002390!4.94e-13!102;UBERON:0003061!4.94e-13!102;UBERON:0001474!2.12e-12!86;UBERON:0001049!3.89e-12!57;UBERON:0005068!3.89e-12!57;UBERON:0006241!3.89e-12!57;UBERON:0007135!3.89e-12!57;UBERON:0002193!6.96e-11!112;UBERON:0004765!1.83e-10!101;UBERON:0001434!1.83e-10!101;UBERON:0001893!1.99e-10!34;UBERON:0002020!2.81e-10!34;UBERON:0003528!2.81e-10!34;UBERON:0002780!3.09e-10!41;UBERON:0001890!3.09e-10!41;UBERON:0006240!3.09e-10!41;UBERON:0002791!7.93e-10!33;UBERON:0003080!8.85e-10!42;UBERON:0000033!2.25e-09!123;UBERON:0003056!2.88e-09!61;UBERON:0003075!3.05e-09!86;UBERON:0007284!3.05e-09!86;UBERON:0000062!4.58e-09!511;UBERON:0001869!4.61e-09!32;UBERON:0005743!7.05e-09!86;UBERON:0002616!1.22e-08!59;UBERON:0000153!1.31e-08!129;UBERON:0007811!1.31e-08!129;UBERON:0000955!1.72e-08!69;UBERON:0006238!1.72e-08!69;UBERON:0002346!3.03e-08!90;UBERON:0001017!3.03e-08!82;UBERON:0000073!6.43e-08!94;UBERON:0001016!6.43e-08!94;UBERON:0004121!1.06e-07!169;UBERON:0007023!1.36e-07!115;UBERON:0002050!2.03e-07!605;UBERON:0005423!2.03e-07!605;UBERON:0000922!2.75e-07!612;UBERON:0002405!3.28e-07!115;UBERON:0000923!3.38e-07!604;UBERON:0005291!3.38e-07!604;UBERON:0006598!3.38e-07!604;UBERON:0002532!3.38e-07!604;UBERON:0000924!4.14e-07!173;UBERON:0006601!4.14e-07!173 | |ontology_enrichment_uberon=UBERON:0002371!1.49e-14!80;UBERON:0002390!4.94e-13!102;UBERON:0003061!4.94e-13!102;UBERON:0001474!2.12e-12!86;UBERON:0001049!3.89e-12!57;UBERON:0005068!3.89e-12!57;UBERON:0006241!3.89e-12!57;UBERON:0007135!3.89e-12!57;UBERON:0002193!6.96e-11!112;UBERON:0004765!1.83e-10!101;UBERON:0001434!1.83e-10!101;UBERON:0001893!1.99e-10!34;UBERON:0002020!2.81e-10!34;UBERON:0003528!2.81e-10!34;UBERON:0002780!3.09e-10!41;UBERON:0001890!3.09e-10!41;UBERON:0006240!3.09e-10!41;UBERON:0002791!7.93e-10!33;UBERON:0003080!8.85e-10!42;UBERON:0000033!2.25e-09!123;UBERON:0003056!2.88e-09!61;UBERON:0003075!3.05e-09!86;UBERON:0007284!3.05e-09!86;UBERON:0000062!4.58e-09!511;UBERON:0001869!4.61e-09!32;UBERON:0005743!7.05e-09!86;UBERON:0002616!1.22e-08!59;UBERON:0000153!1.31e-08!129;UBERON:0007811!1.31e-08!129;UBERON:0000955!1.72e-08!69;UBERON:0006238!1.72e-08!69;UBERON:0002346!3.03e-08!90;UBERON:0001017!3.03e-08!82;UBERON:0000073!6.43e-08!94;UBERON:0001016!6.43e-08!94;UBERON:0004121!1.06e-07!169;UBERON:0007023!1.36e-07!115;UBERON:0002050!2.03e-07!605;UBERON:0005423!2.03e-07!605;UBERON:0000922!2.75e-07!612;UBERON:0002405!3.28e-07!115;UBERON:0000923!3.38e-07!604;UBERON:0005291!3.38e-07!604;UBERON:0006598!3.38e-07!604;UBERON:0002532!3.38e-07!604;UBERON:0000924!4.14e-07!173;UBERON:0006601!4.14e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.11e-07;41!UBERON:0001890;5.11e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002780;5.11e-07;41!UBERON:0001890;5.11e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.81e-24,76;UBERON:0001474,3.33e-21,82;UBERON:0004765,2.92e-18,90;UBERON:0002390,8.35e-18,98;UBERON:0003061,8.35e-18,98;UBERON:0002405,2.70e-17,93;UBERON:0001434,3.09e-16,100;UBERON:0002193,4.84e-15,108;UBERON:0001049,1.72e-12,56;UBERON:0005068,1.72e-12,56;UBERON:0006241,1.72e-12,56;UBERON:0007135,1.72e-12,56;UBERON:0010371,3.64e-11,104;UBERON:0000073,4.44e-10,53;UBERON:0002616,4.44e-10,53;UBERON:0003075,1.36e-09,82;UBERON:0007284,1.36e-09,82;UBERON:0002346,8.64e-09,86;UBERON:0002780,2.23e-08,41;UBERON:0001890,2.23e-08,41;UBERON:0003080,2.23e-08,41;UBERON:0006240,2.23e-08,41;UBERON:0000955,6.11e-08,68;UBERON:0006238,6.11e-08,68;UBERON:0001017,7.68e-08,81;UBERON:0005423,8.41e-08,581;UBERON:0000923,8.99e-08,560;UBERON:0010316,8.99e-08,560;UBERON:0005291,8.99e-08,560;UBERON:0006598,8.99e-08,560;UBERON:0010317,8.99e-08,560;UBERON:0002532,8.99e-08,560;UBERON:0002050,1.55e-07,564;UBERON:0001893,2.42e-07,34;UBERON:0003056,3.08e-07,61;UBERON:0003528,3.49e-07,34;UBERON:0002020,3.49e-07,34;UBERON:0000922,3.62e-07,592;UBERON:0001016,3.70e-07,89 | |||
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| ||
|short_description=p2@NIPAL4 | |short_description=p2@NIPAL4 | ||
}} | }} |
Latest revision as of 13:57, 16 September 2015
Short description: | p2@NIPAL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NIPAL4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -4bp_to_ENST00000519150_5end |
EntrezGene: | NIPAL4 |
HGNC: | 28018 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.49e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.49e-37 | 42 |
defensive cell | 4.92e-37 | 48 |
phagocyte | 4.92e-37 | 48 |
macrophage dendritic cell progenitor | 4.49e-31 | 61 |
myeloid leukocyte | 4.26e-29 | 72 |
monopoietic cell | 8.02e-29 | 59 |
monocyte | 8.02e-29 | 59 |
monoblast | 8.02e-29 | 59 |
promonocyte | 8.02e-29 | 59 |
granulocyte monocyte progenitor cell | 1.10e-28 | 67 |
myeloid lineage restricted progenitor cell | 1.50e-24 | 66 |
leukocyte | 1.32e-18 | 136 |
myeloid cell | 3.45e-18 | 108 |
common myeloid progenitor | 3.45e-18 | 108 |
nongranular leukocyte | 3.69e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.21e-15 | 120 |
hematopoietic stem cell | 5.90e-13 | 168 |
hematopoietic cell | 3.17e-12 | 177 |
hematopoietic oligopotent progenitor cell | 4.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.53e-12 | 161 |
transitional epithelial cell | 5.39e-08 | 4 |
urothelial cell | 5.39e-08 | 4 |