FFCP PHASE1:Hg19::chr17:38171895..38171901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1440 | |EntrezGene=1440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2438 | |HGNC=2438 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N4W3 | |UniProt=Q8N4W3 | ||
|association_with_transcript=195bp_to_ENST00000331769,ENST00000479880_5end | |association_with_transcript=195bp_to_ENST00000331769,ENST00000479880_5end | ||
|cluster_id=chr17:38171895..38171901,+ | |||
|coexpression_cluster_id=C1432 | |coexpression_cluster_id=C1432 | ||
|description=CAGE_peak_4_at_CSF3_5end | |description=CAGE_peak_4_at_CSF3_5end | ||
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|ontology_enrichment_celltype=CL:0002539!2.10e-14!10;CL:0000359!2.14e-13!32;CL:0000680!6.25e-10!57;CL:0000056!6.25e-10!57;CL:0000355!6.25e-10!57;CL:0000192!2.94e-09!42;CL:0000514!2.94e-09!42;CL:0002166!1.52e-07!3;CL:0002621!1.90e-07!3;CL:0000187!2.76e-07!54;CL:0002582!8.99e-07!3 | |ontology_enrichment_celltype=CL:0002539!2.10e-14!10;CL:0000359!2.14e-13!32;CL:0000680!6.25e-10!57;CL:0000056!6.25e-10!57;CL:0000355!6.25e-10!57;CL:0000192!2.94e-09!42;CL:0000514!2.94e-09!42;CL:0002166!1.52e-07!3;CL:0002621!1.90e-07!3;CL:0000187!2.76e-07!54;CL:0002582!8.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002539;8.71e-20;10!CL:0000359;3.24e-19;32!CL:0002593;7.65e-13;2!CL:0000317;1.01e-11;2!CL:1000448;1.01e-11;2!CL:0002308;1.01e-11;2!CL:0002140;1.01e-11;2!CL:0000192;1.29e-09;43!CL:0002138;1.67e-09;6!CL:0002592;7.63e-09;3 | |ontology_enrichment_celltype_v019=CL:0002539;8.71e-20;10!CL:0000359;3.24e-19;32!CL:0002593;7.65e-13;2!CL:0000317;1.01e-11;2!CL:1000448;1.01e-11;2!CL:0002308;1.01e-11;2!CL:0002140;1.01e-11;2!CL:0000192;1.29e-09;43!CL:0002138;1.67e-09;6!CL:0002592;7.63e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002539,8.16e-20,10;CL:0000359,1.29e-19,32;CL:0000192,4.71e-14,43;CL:0000514,4.71e-14,43;CL:0002593,7.89e-13,2;CL:0000317,9.06e-12,2;CL:1000448,9.06e-12,2;CL:0002308,9.06e-12,2;CL:0002140,9.06e-12,2;CL:0000187,1.58e-10,55;CL:0000680,7.10e-10,58;CL:0000056,7.10e-10,58;CL:0000355,7.10e-10,58;CL:0005020,1.65e-09,6;CL:0002138,1.65e-09,6;CL:0005022,1.65e-09,6;CL:0000393,2.75e-09,61;CL:0000211,2.75e-09,61;CL:0002592,7.79e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.29e-09;43!CL:0005022;1.67e-09;6 | |ontology_enrichment_development_v019=CL:0000514;1.29e-09;43!CL:0005022;1.67e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004237;8.71e-20;10!UBERON:0004695;8.71e-20;10!UBERON:0002111;8.71e-20;10!UBERON:0004178;8.71e-20;10!UBERON:0004573;9.55e-17;33!UBERON:0004571;9.55e-17;33!UBERON:0002119;2.23e-13;4!UBERON:0001135;5.19e-13;15!UBERON:0002456;7.65e-13;2!UBERON:0002419;1.01e-11;2!UBERON:0007771;1.01e-11;2!UBERON:0003297;1.01e-11;2!UBERON:0001821;1.01e-11;2!UBERON:0003487;1.01e-11;2!UBERON:0001820;1.01e-11;2!UBERON:0001637;8.31e-10;42!UBERON:0003509;8.31e-10;42!UBERON:0004572;8.31e-10;42!UBERON:0000947;3.94e-09;21!UBERON:0010191;3.94e-09;21!UBERON:0003498;7.63e-09;3!UBERON:0005985;7.63e-09;3!UBERON:0001621;7.63e-09;3!UBERON:0000055;1.12e-08;65!UBERON:0002385;1.23e-07;31!UBERON:0001015;1.23e-07;31!UBERON:0000383;1.23e-07;31!UBERON:0001473;3.15e-07;8!UBERON:0004536;3.15e-07;8!UBERON:0006558;3.15e-07;8!UBERON:0002134;4.38e-07;1!UBERON:0005208;4.38e-07;1!UBERON:0004145;4.38e-07;1!UBERON:0005946;4.38e-07;1!UBERON:0005965;4.38e-07;1!UBERON:0002078;4.38e-07;1!UBERON:0000992;4.74e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0004237;8.71e-20;10!UBERON:0004695;8.71e-20;10!UBERON:0002111;8.71e-20;10!UBERON:0004178;8.71e-20;10!UBERON:0004573;9.55e-17;33!UBERON:0004571;9.55e-17;33!UBERON:0002119;2.23e-13;4!UBERON:0001135;5.19e-13;15!UBERON:0002456;7.65e-13;2!UBERON:0002419;1.01e-11;2!UBERON:0007771;1.01e-11;2!UBERON:0003297;1.01e-11;2!UBERON:0001821;1.01e-11;2!UBERON:0003487;1.01e-11;2!UBERON:0001820;1.01e-11;2!UBERON:0001637;8.31e-10;42!UBERON:0003509;8.31e-10;42!UBERON:0004572;8.31e-10;42!UBERON:0000947;3.94e-09;21!UBERON:0010191;3.94e-09;21!UBERON:0003498;7.63e-09;3!UBERON:0005985;7.63e-09;3!UBERON:0001621;7.63e-09;3!UBERON:0000055;1.12e-08;65!UBERON:0002385;1.23e-07;31!UBERON:0001015;1.23e-07;31!UBERON:0000383;1.23e-07;31!UBERON:0001473;3.15e-07;8!UBERON:0004536;3.15e-07;8!UBERON:0006558;3.15e-07;8!UBERON:0002134;4.38e-07;1!UBERON:0005208;4.38e-07;1!UBERON:0004145;4.38e-07;1!UBERON:0005946;4.38e-07;1!UBERON:0005965;4.38e-07;1!UBERON:0002078;4.38e-07;1!UBERON:0000992;4.74e-07;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,8.16e-20,10;UBERON:0004695,8.16e-20,10;UBERON:0002111,8.16e-20,10;UBERON:0004178,8.16e-20,10;UBERON:0004573,5.87e-19,33;UBERON:0004571,5.87e-19,33;UBERON:0000055,6.74e-16,68;UBERON:0001637,1.94e-14,42;UBERON:0003509,1.94e-14,42;UBERON:0004572,1.94e-14,42;UBERON:0002049,1.90e-13,78;UBERON:0007798,1.90e-13,78;UBERON:0002119,1.93e-13,4;UBERON:0001135,4.97e-13,15;UBERON:0002456,7.89e-13,2;UBERON:0002419,9.06e-12,2;UBERON:0007771,9.06e-12,2;UBERON:0003297,9.06e-12,2;UBERON:0001821,9.06e-12,2;UBERON:0003487,9.06e-12,2;UBERON:0001820,9.06e-12,2;UBERON:0005089,9.06e-12,2;UBERON:0005088,9.06e-12,2;UBERON:0007500,1.30e-11,59;UBERON:0001981,1.30e-11,59;UBERON:0004537,1.30e-11,59;UBERON:0006965,1.30e-11,59;UBERON:0001134,6.75e-11,62;UBERON:0002036,6.75e-11,62;UBERON:0003082,6.75e-11,62;UBERON:0002329,6.87e-11,71;UBERON:0003059,6.87e-11,71;UBERON:0007282,6.87e-11,71;UBERON:0004290,6.87e-11,71;UBERON:0009618,6.87e-11,71;UBERON:0003077,1.06e-10,72;UBERON:0007285,1.06e-10,72;UBERON:0007524,1.61e-10,73;UBERON:0000486,1.65e-10,83;UBERON:0002385,1.75e-10,64;UBERON:0001015,1.75e-10,64;UBERON:0000383,1.75e-10,64;UBERON:0004535,4.16e-10,109;UBERON:0001009,9.54e-10,112;UBERON:0007503,1.12e-09,78;UBERON:0000947,3.83e-09,21;UBERON:0010191,3.83e-09,21;UBERON:0004872,5.08e-09,83;UBERON:0001621,7.79e-09,3;UBERON:0001048,2.34e-07,160;UBERON:0001473,3.12e-07,8;UBERON:0004536,3.12e-07,8;UBERON:0006558,3.12e-07,8;UBERON:0002134,4.51e-07,1;UBERON:0005208,4.51e-07,1;UBERON:0005946,4.51e-07,1;UBERON:0005965,4.51e-07,1;UBERON:0002078,4.51e-07,1;UBERON:0000992,4.75e-07,13;UBERON:0005418,7.57e-07,1;UBERON:0001389,7.57e-07,1;UBERON:0000026,7.57e-07,1;UBERON:0008784,7.57e-07,1;UBERON:0006058,7.57e-07,1;UBERON:0003663,7.57e-07,1;UBERON:0004256,7.57e-07,1;UBERON:0004708,7.57e-07,1;UBERON:0002101,7.57e-07,1;UBERON:0004709,7.57e-07,1;UBERON:0002529,7.57e-07,1;UBERON:0010538,7.57e-07,1;UBERON:0003661,7.57e-07,1;UBERON:0010890,7.57e-07,1;UBERON:0002471,7.57e-07,1;UBERON:0001383,7.57e-07,1;UBERON:0004357,7.57e-07,1;UBERON:0004347,7.57e-07,1;UBERON:0005420,7.57e-07,1;UBERON:0005732,7.57e-07,1;UBERON:0010758,7.57e-07,1;UBERON:0010707,7.57e-07,1;UBERON:0000978,7.57e-07,1;UBERON:0002103,7.57e-07,1;UBERON:0001665,7.57e-07,1;UBERON:0003823,7.57e-07,1;UBERON:0000154,7.57e-07,1;UBERON:0010709,7.57e-07,1;UBERON:0005733,7.57e-07,1;UBERON:0005730,7.57e-07,1 | |||
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|short_description=p4@CSF3 | |short_description=p4@CSF3 | ||
}} | }} |
Latest revision as of 23:35, 19 September 2015
Short description: | p4@CSF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSF3_5end |
Coexpression cluster: | C1432_mesenchymal_Smooth_Lymphatic_Preadipocyte_Sebocyte_CD14_anaplastic |
Association with transcript: | 195bp_to_ENST00000331769, ENST00000479880_5end |
EntrezGene: | CSF3 |
HGNC: | 2438 |
UniProt: | Q8N4W3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 8.16e-20 | 10 |
vascular associated smooth muscle cell | 1.29e-19 | 32 |
smooth muscle cell | 4.71e-14 | 43 |
smooth muscle myoblast | 4.71e-14 | 43 |
smooth muscle cell of the internal thoracic artery | 7.89e-13 | 2 |
sebum secreting cell | 9.06e-12 | 2 |
epithelial cell of sweat gland | 9.06e-12 | 2 |
epithelial cell of skin gland | 9.06e-12 | 2 |
acinar cell of sebaceous gland | 9.06e-12 | 2 |
muscle cell | 1.58e-10 | 55 |
muscle precursor cell | 7.10e-10 | 58 |
myoblast | 7.10e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.10e-10 | 58 |
lymphangioblast | 1.65e-09 | 6 |
endothelial cell of lymphatic vessel | 1.65e-09 | 6 |
vascular lymphangioblast | 1.65e-09 | 6 |
electrically responsive cell | 2.75e-09 | 61 |
electrically active cell | 2.75e-09 | 61 |
smooth muscle cell of the coronary artery | 7.79e-09 | 3 |