FFCP PHASE1:Hg19::chr8:57232656..57232743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=195814 | |EntrezGene=195814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30311 | |HGNC=30311 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000396721_5end | |association_with_transcript=0bp_to_ENST00000396721_5end | ||
|cluster_id=chr8:57232656..57232743,- | |||
|description=CAGE_peak_1_at_SDR16C5_5end | |description=CAGE_peak_1_at_SDR16C5_5end | ||
|id=chr8:57232656..57232743,- | |id=chr8:57232656..57232743,- | ||
|ontology_enrichment_celltype=CL:0000066!2.39e-11!254;CL:0002076!1.29e-10!43;CL:0002368!1.27e-09!13;CL:0000223!2.38e-07!59 | |ontology_enrichment_celltype=CL:0000066!2.39e-11!254;CL:0002076!1.29e-10!43;CL:0002368!1.27e-09!13;CL:0000223!2.38e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002368;6.50e-11;13!CL:0002076;1.20e-09;42!CL:0002159;5.53e-08;14 | |ontology_enrichment_celltype_v019=CL:0002368;6.50e-11;13!CL:0002076;1.20e-09;42!CL:0002159;5.53e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.15e-13,42;CL:0002368,7.16e-11,13;CL:0000066,7.98e-11,253;CL:0000223,1.16e-08,58;CL:0002159,5.35e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.20e-14;29!UBERON:0006595;2.80e-07;86 | |ontology_enrichment_development_v019=UBERON:0008947;8.20e-14;29!UBERON:0006595;2.80e-07;86 | ||
|ontology_enrichment_disease=DOID:305!2.02e-15!106;DOID:0050687!1.87e-07!143 | |ontology_enrichment_disease=DOID:305!2.02e-15!106;DOID:0050687!1.87e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.75e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.40e-28!115;UBERON:0001049!4.32e-22!57;UBERON:0005068!4.32e-22!57;UBERON:0006241!4.32e-22!57;UBERON:0007135!4.32e-22!57;UBERON:0001004!1.26e-21!72;UBERON:0003080!7.59e-20!42;UBERON:0002616!9.49e-20!59;UBERON:0004119!1.15e-19!169;UBERON:0000925!1.15e-19!169;UBERON:0006595!1.15e-19!169;UBERON:0000153!1.93e-19!129;UBERON:0007811!1.93e-19!129;UBERON:0002780!2.56e-19!41;UBERON:0001890!2.56e-19!41;UBERON:0006240!2.56e-19!41;UBERON:0000065!3.01e-19!53;UBERON:0000033!1.07e-18!123;UBERON:0001007!1.43e-17!155;UBERON:0001555!1.43e-17!155;UBERON:0007026!1.43e-17!155;UBERON:0004921!3.23e-17!129;UBERON:0004185!3.23e-17!129;UBERON:0000955!3.43e-16!69;UBERON:0006238!3.43e-16!69;UBERON:0001869!3.71e-16!32;UBERON:0008947!4.57e-16!38;UBERON:0003258!4.57e-16!38;UBERON:0001893!1.09e-15!34;UBERON:0001017!1.12e-15!82;UBERON:0002020!1.28e-15!34;UBERON:0003528!1.28e-15!34;UBERON:0002791!5.36e-15!33;UBERON:0005743!7.82e-15!86;UBERON:0001041!8.09e-15!98;UBERON:0003075!2.16e-14!86;UBERON:0007284!2.16e-14!86;UBERON:0000077!4.05e-14!130;UBERON:0000072!7.84e-14!46;UBERON:0000064!1.15e-13!219;UBERON:0002619!1.28e-13!22;UBERON:0004121!1.99e-13!169;UBERON:0003056!2.61e-13!61;UBERON:0000956!4.73e-13!25;UBERON:0000203!4.73e-13!25;UBERON:0002346!5.53e-13!90;UBERON:0001950!9.11e-13!20;UBERON:0000062!1.40e-12!511;UBERON:0000924!1.51e-12!173;UBERON:0006601!1.51e-12!173;UBERON:0000481!2.28e-12!347;UBERON:0000073!8.21e-12!94;UBERON:0001016!8.21e-12!94;UBERON:0005178!4.15e-10!34;UBERON:0002224!4.15e-10!34;UBERON:0005181!1.40e-09!35;UBERON:0005153!1.80e-09!37;UBERON:0000063!2.32e-09!97;UBERON:0000475!3.78e-09!365;UBERON:0002048!9.30e-09!22;UBERON:0000117!9.30e-09!22;UBERON:0000171!9.30e-09!22;UBERON:0000170!9.30e-09!22;UBERON:0005597!9.30e-09!22;UBERON:0000118!9.30e-09!22;UBERON:0000477!6.94e-08!286;UBERON:0005157!9.40e-08!51;UBERON:0001557!2.08e-07!19;UBERON:0004111!2.14e-07!241;UBERON:0001737!3.91e-07!9;UBERON:0004807!5.52e-07!28;UBERON:0002050!6.13e-07!605;UBERON:0005423!6.13e-07!605;UBERON:0000922!6.15e-07!612;UBERON:0000480!7.00e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!9.40e-28!115;UBERON:0001049!4.32e-22!57;UBERON:0005068!4.32e-22!57;UBERON:0006241!4.32e-22!57;UBERON:0007135!4.32e-22!57;UBERON:0001004!1.26e-21!72;UBERON:0003080!7.59e-20!42;UBERON:0002616!9.49e-20!59;UBERON:0004119!1.15e-19!169;UBERON:0000925!1.15e-19!169;UBERON:0006595!1.15e-19!169;UBERON:0000153!1.93e-19!129;UBERON:0007811!1.93e-19!129;UBERON:0002780!2.56e-19!41;UBERON:0001890!2.56e-19!41;UBERON:0006240!2.56e-19!41;UBERON:0000065!3.01e-19!53;UBERON:0000033!1.07e-18!123;UBERON:0001007!1.43e-17!155;UBERON:0001555!1.43e-17!155;UBERON:0007026!1.43e-17!155;UBERON:0004921!3.23e-17!129;UBERON:0004185!3.23e-17!129;UBERON:0000955!3.43e-16!69;UBERON:0006238!3.43e-16!69;UBERON:0001869!3.71e-16!32;UBERON:0008947!4.57e-16!38;UBERON:0003258!4.57e-16!38;UBERON:0001893!1.09e-15!34;UBERON:0001017!1.12e-15!82;UBERON:0002020!1.28e-15!34;UBERON:0003528!1.28e-15!34;UBERON:0002791!5.36e-15!33;UBERON:0005743!7.82e-15!86;UBERON:0001041!8.09e-15!98;UBERON:0003075!2.16e-14!86;UBERON:0007284!2.16e-14!86;UBERON:0000077!4.05e-14!130;UBERON:0000072!7.84e-14!46;UBERON:0000064!1.15e-13!219;UBERON:0002619!1.28e-13!22;UBERON:0004121!1.99e-13!169;UBERON:0003056!2.61e-13!61;UBERON:0000956!4.73e-13!25;UBERON:0000203!4.73e-13!25;UBERON:0002346!5.53e-13!90;UBERON:0001950!9.11e-13!20;UBERON:0000062!1.40e-12!511;UBERON:0000924!1.51e-12!173;UBERON:0006601!1.51e-12!173;UBERON:0000481!2.28e-12!347;UBERON:0000073!8.21e-12!94;UBERON:0001016!8.21e-12!94;UBERON:0005178!4.15e-10!34;UBERON:0002224!4.15e-10!34;UBERON:0005181!1.40e-09!35;UBERON:0005153!1.80e-09!37;UBERON:0000063!2.32e-09!97;UBERON:0000475!3.78e-09!365;UBERON:0002048!9.30e-09!22;UBERON:0000117!9.30e-09!22;UBERON:0000171!9.30e-09!22;UBERON:0000170!9.30e-09!22;UBERON:0005597!9.30e-09!22;UBERON:0000118!9.30e-09!22;UBERON:0000477!6.94e-08!286;UBERON:0005157!9.40e-08!51;UBERON:0001557!2.08e-07!19;UBERON:0004111!2.14e-07!241;UBERON:0001737!3.91e-07!9;UBERON:0004807!5.52e-07!28;UBERON:0002050!6.13e-07!605;UBERON:0005423!6.13e-07!605;UBERON:0000922!6.15e-07!612;UBERON:0000480!7.00e-07!626 | ||
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| ||
|short_description=p1@SDR16C5 | |short_description=p1@SDR16C5 | ||
}} | }} |
Latest revision as of 13:54, 18 September 2015
Short description: | p1@SDR16C5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SDR16C5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396721_5end |
EntrezGene: | SDR16C5 |
HGNC: | 30311 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.15e-13 | 42 |
respiratory epithelial cell | 7.16e-11 | 13 |
epithelial cell | 7.98e-11 | 253 |
endodermal cell | 1.16e-08 | 58 |
general ecto-epithelial cell | 5.35e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.75e-11 | 106 |