FFCP PHASE1:Hg19::chr11:62525488..62525511,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:62525488..62525511,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr11:62525488..62525511,- | |description=CAGE_peak_at_chr11:62525488..62525511,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.46e-33!5;CL:0000039!1.70e-23!7;CL:0000586!1.70e-23!7;CL:0000540!6.59e-11!6;CL:0000031!6.59e-11!6;CL:0000404!6.59e-11!6;CL:0000047!2.73e-08!8 | |ontology_enrichment_celltype=CL:0002322!1.46e-33!5;CL:0000039!1.70e-23!7;CL:0000586!1.70e-23!7;CL:0000540!6.59e-11!6;CL:0000031!6.59e-11!6;CL:0000404!6.59e-11!6;CL:0000047!2.73e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.59e-76;5!CL:0000039;7.07e-35;7!CL:0000586;7.07e-35;7!CL:0002321;1.99e-25;15!CL:0000540;5.52e-24;6!CL:0000404;5.52e-24;6!CL:0000148;2.28e-14;10!CL:0000147;1.93e-10;14!CL:0000710;1.79e-07;20 | |ontology_enrichment_celltype_v019=CL:0002322;9.59e-76;5!CL:0000039;7.07e-35;7!CL:0000586;7.07e-35;7!CL:0002321;1.99e-25;15!CL:0000540;5.52e-24;6!CL:0000404;5.52e-24;6!CL:0000148;2.28e-14;10!CL:0000147;1.93e-10;14!CL:0000710;1.79e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.21e-75,5;CL:0000039,6.20e-35,7;CL:0000586,6.20e-35,7;CL:0000540,5.74e-24,6;CL:0000031,5.74e-24,6;CL:0000404,5.74e-24,6;CL:0000047,3.72e-18,8;CL:0000148,2.33e-14,10;CL:0000541,2.33e-14,10;CL:0000147,1.97e-10,14;CL:0000133,7.22e-09,59;CL:0000710,1.81e-07,20;CL:0000221,2.94e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.46e-24;10!UBERON:0005564;1.46e-24;10!CL:0000031;5.52e-24;6 | |ontology_enrichment_development_v019=UBERON:0009117;1.46e-24;10!UBERON:0005564;1.46e-24;10!CL:0000031;5.52e-24;6 | ||
|ontology_enrichment_disease=DOID:3095!3.18e-10!22;DOID:2994!3.18e-10!22 | |ontology_enrichment_disease=DOID:3095!3.18e-10!22;DOID:2994!3.18e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.30e-11;22!DOID:2994;2.30e-11;22 | |ontology_enrichment_disease_v019=DOID:3095;2.30e-11;22!DOID:2994;2.30e-11;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.21e-11,22;DOID:2994,2.21e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.46e-16!82;UBERON:0005743!1.90e-15!86;UBERON:0000073!1.02e-13!94;UBERON:0001016!1.02e-13!94;UBERON:0000473!1.14e-13!8;UBERON:0001049!1.77e-13!57;UBERON:0005068!1.77e-13!57;UBERON:0006241!1.77e-13!57;UBERON:0007135!1.77e-13!57;UBERON:0002298!5.15e-13!8;UBERON:0002616!5.91e-13!59;UBERON:0000955!1.50e-12!69;UBERON:0006238!1.50e-12!69;UBERON:0002780!8.48e-11!41;UBERON:0001890!8.48e-11!41;UBERON:0006240!8.48e-11!41;UBERON:0003080!1.63e-10!42;UBERON:0001893!2.01e-10!34;UBERON:0003135!5.66e-10!11;UBERON:0001896!1.71e-09!3;UBERON:0005290!1.71e-09!3;UBERON:0010096!1.71e-09!3;UBERON:0002791!2.56e-08!33;UBERON:0003075!2.95e-08!86;UBERON:0007284!2.95e-08!86;UBERON:0007023!4.57e-08!115;UBERON:0002336!6.97e-08!1;UBERON:0001018!6.97e-08!1;UBERON:0002473!6.97e-08!1;UBERON:0005340!6.97e-08!1;UBERON:0002316!6.97e-08!1;UBERON:0003544!6.97e-08!1;UBERON:0001020!6.97e-08!1;UBERON:0005970!6.97e-08!1;UBERON:0002437!6.97e-08!1;UBERON:0002346!8.44e-08!90;UBERON:0003112!8.51e-08!1;UBERON:0000032!8.51e-08!1;UBERON:0005253!8.51e-08!1;UBERON:0003128!8.51e-08!1;UBERON:0002241!8.51e-08!1;UBERON:0001703!8.51e-08!1;UBERON:0004761!8.51e-08!1;UBERON:0009617!8.51e-08!1;UBERON:0002038!9.10e-08!1;UBERON:0009661!9.10e-08!1;UBERON:0002581!1.11e-07!1;UBERON:0007190!1.64e-07!1;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0000033!3.26e-07!123;UBERON:0003056!7.19e-07!61;UBERON:0000153!9.16e-07!129;UBERON:0007811!9.16e-07!129 | |ontology_enrichment_uberon=UBERON:0001017!2.46e-16!82;UBERON:0005743!1.90e-15!86;UBERON:0000073!1.02e-13!94;UBERON:0001016!1.02e-13!94;UBERON:0000473!1.14e-13!8;UBERON:0001049!1.77e-13!57;UBERON:0005068!1.77e-13!57;UBERON:0006241!1.77e-13!57;UBERON:0007135!1.77e-13!57;UBERON:0002298!5.15e-13!8;UBERON:0002616!5.91e-13!59;UBERON:0000955!1.50e-12!69;UBERON:0006238!1.50e-12!69;UBERON:0002780!8.48e-11!41;UBERON:0001890!8.48e-11!41;UBERON:0006240!8.48e-11!41;UBERON:0003080!1.63e-10!42;UBERON:0001893!2.01e-10!34;UBERON:0003135!5.66e-10!11;UBERON:0001896!1.71e-09!3;UBERON:0005290!1.71e-09!3;UBERON:0010096!1.71e-09!3;UBERON:0002791!2.56e-08!33;UBERON:0003075!2.95e-08!86;UBERON:0007284!2.95e-08!86;UBERON:0007023!4.57e-08!115;UBERON:0002336!6.97e-08!1;UBERON:0001018!6.97e-08!1;UBERON:0002473!6.97e-08!1;UBERON:0005340!6.97e-08!1;UBERON:0002316!6.97e-08!1;UBERON:0003544!6.97e-08!1;UBERON:0001020!6.97e-08!1;UBERON:0005970!6.97e-08!1;UBERON:0002437!6.97e-08!1;UBERON:0002346!8.44e-08!90;UBERON:0003112!8.51e-08!1;UBERON:0000032!8.51e-08!1;UBERON:0005253!8.51e-08!1;UBERON:0003128!8.51e-08!1;UBERON:0002241!8.51e-08!1;UBERON:0001703!8.51e-08!1;UBERON:0004761!8.51e-08!1;UBERON:0009617!8.51e-08!1;UBERON:0002038!9.10e-08!1;UBERON:0009661!9.10e-08!1;UBERON:0002581!1.11e-07!1;UBERON:0007190!1.64e-07!1;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0000033!3.26e-07!123;UBERON:0003056!7.19e-07!61;UBERON:0000153!9.16e-07!129;UBERON:0007811!9.16e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.40e-30;8!UBERON:0003135;2.28e-22;11!UBERON:0000922;3.01e-15;49!UBERON:0000991;6.85e-12;21!UBERON:0003101;2.30e-11;22!UBERON:0000079;2.30e-11;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.40e-30;8!UBERON:0003135;2.28e-22;11!UBERON:0000922;3.01e-15;49!UBERON:0000991;6.85e-12;21!UBERON:0003101;2.30e-11;22!UBERON:0000079;2.30e-11;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.24e-30,8;UBERON:0003135,2.10e-22,11;UBERON:0000991,6.56e-12,21;UBERON:0009196,6.56e-12,21;UBERON:0009117,6.56e-12,21;UBERON:0005564,6.56e-12,21;UBERON:0004176,2.21e-11,22;UBERON:0003101,2.21e-11,22;UBERON:0000079,2.21e-11,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.14802795971965,3.18071443971565,4.76395165765025,3.21349270547648,4.79409616663694,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,9.00217631404107,14.4416408427095,12.0477698028464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,10.3008718039402,3.74104367371785,3.30821638325442,2.50707539292375,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.14802795971965,3.18071443971565,4.76395165765025,3.21349270547648,4.79409616663694,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,9.00217631404107,14.4416408427095,12.0477698028464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,10.3008718039402,3.74104367371785,3.30821638325442,2.50707539292375,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:62525488..62525511,- | |short_description=p@chr11:62525488..62525511,- | ||
}} | }} |
Latest revision as of 23:50, 23 July 2015
Short description: | p@chr11:62525488..62525511, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62525488..62525511, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.21e-75 | 5 |
germ line cell | 6.20e-35 | 7 |
germ cell | 6.20e-35 | 7 |
neuron | 5.74e-24 | 6 |
neuroblast | 5.74e-24 | 6 |
electrically signaling cell | 5.74e-24 | 6 |
neuronal stem cell | 3.72e-18 | 8 |
melanocyte | 2.33e-14 | 10 |
melanoblast | 2.33e-14 | 10 |
pigment cell | 1.97e-10 | 14 |
neurectodermal cell | 7.22e-09 | 59 |
neurecto-epithelial cell | 1.81e-07 | 20 |
ectodermal cell | 2.94e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 1.24e-30 | 8 |
male reproductive organ | 2.10e-22 | 11 |
gonad | 6.56e-12 | 21 |
indifferent external genitalia | 6.56e-12 | 21 |
indifferent gonad | 6.56e-12 | 21 |
gonad primordium | 6.56e-12 | 21 |
external genitalia | 2.21e-11 | 22 |
male organism | 2.21e-11 | 22 |
male reproductive system | 2.21e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.21e-11 | 22 |
germ cell cancer | 2.21e-11 | 22 |