FFCP PHASE1:Hg19::chr11:26588634..26588641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:26588634..26588641,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_at_chr11:26588634..26588641,- | |description=CAGE_peak_at_chr11:26588634..26588641,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;3.26e-11;5 | |ontology_enrichment_celltype_v019=CL:0002537;3.26e-11;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.26e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.32e-26;2!UBERON:0007123;3.26e-11;5 | |ontology_enrichment_development_v019=UBERON:0007297;4.32e-26;2!UBERON:0007123;3.26e-11;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.42e-10!2;UBERON:0002046!9.86e-10!5;UBERON:0004117!9.86e-10!5;UBERON:0007689!9.86e-10!5;UBERON:0007123!9.86e-10!5;UBERON:0003091!9.86e-10!5;UBERON:0003929!1.08e-08!54;UBERON:0008814!3.75e-08!15;UBERON:0001007!4.60e-08!155;UBERON:0001555!4.60e-08!155;UBERON:0007026!4.60e-08!155;UBERON:0004119!5.09e-08!169;UBERON:0000925!5.09e-08!169;UBERON:0006595!5.09e-08!169;UBERON:0009722!1.94e-07!11;UBERON:0007690!1.94e-07!11;UBERON:0001301!9.91e-07!1 | |ontology_enrichment_uberon=UBERON:0003127!1.42e-10!2;UBERON:0002046!9.86e-10!5;UBERON:0004117!9.86e-10!5;UBERON:0007689!9.86e-10!5;UBERON:0007123!9.86e-10!5;UBERON:0003091!9.86e-10!5;UBERON:0003929!1.08e-08!54;UBERON:0008814!3.75e-08!15;UBERON:0001007!4.60e-08!155;UBERON:0001555!4.60e-08!155;UBERON:0007026!4.60e-08!155;UBERON:0004119!5.09e-08!169;UBERON:0000925!5.09e-08!169;UBERON:0006595!5.09e-08!169;UBERON:0009722!1.94e-07!11;UBERON:0007690!1.94e-07!11;UBERON:0001301!9.91e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.46e-50;1!UBERON:0006947;6.76e-18;3!UBERON:0004054;6.76e-18;3!UBERON:0005904;8.81e-14;4!UBERON:0002046;3.26e-11;5!UBERON:0000305;2.18e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0001301;1.46e-50;1!UBERON:0006947;6.76e-18;3!UBERON:0004054;6.76e-18;3!UBERON:0005904;8.81e-14;4!UBERON:0002046;3.26e-11;5!UBERON:0000305;2.18e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.46e-50,1;UBERON:0006947,6.76e-18,3;UBERON:0004054,6.76e-18,3;UBERON:0005904,8.82e-14,4;UBERON:0002046,3.60e-11,5;UBERON:0004117,3.60e-11,5;UBERON:0007689,3.60e-11,5;UBERON:0007123,3.60e-11,5;UBERON:0003091,3.60e-11,5;UBERON:0000305,2.18e-08,7;UBERON:0005103,1.49e-07,8;UBERON:0000083,1.49e-07,8;UBERON:0009201,1.49e-07,8;UBERON:0006553,1.49e-07,8;UBERON:0003074,1.49e-07,8;UBERON:0003060,1.49e-07,8;UBERON:0004871,1.69e-07,8;UBERON:0000080,7.48e-07,9;UBERON:0002120,7.48e-07,9;UBERON:0004875,7.48e-07,9;UBERON:0005721,7.48e-07,9;UBERON:0005754,7.48e-07,9;UBERON:0007297,7.48e-07,9 | |||
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|short_description=p@chr11:26588634..26588641,- | |short_description=p@chr11:26588634..26588641,- | ||
}} | }} |
Latest revision as of 21:14, 23 July 2015
Short description: | p@chr11:26588634..26588641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:26588634..26588641, - |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.26e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.46e-50 | 1 |
male genital duct | 6.76e-18 | 3 |
internal male genitalia | 6.76e-18 | 3 |
duct of male reproductive system | 8.82e-14 | 4 |
thyroid gland | 3.60e-11 | 5 |
pharyngeal pouch | 3.60e-11 | 5 |
thyroid diverticulum | 3.60e-11 | 5 |
pharyngeal pouch 2 | 3.60e-11 | 5 |
thyroid primordium | 3.60e-11 | 5 |
amnion | 2.18e-08 | 7 |
mesonephric epithelium | 1.49e-07 | 8 |
mesonephric tubule | 1.49e-07 | 8 |
nephric duct | 1.49e-07 | 8 |
renal duct | 1.49e-07 | 8 |
mesonephric duct | 1.49e-07 | 8 |
pronephric duct | 1.49e-07 | 8 |
somatic layer of lateral plate mesoderm | 1.69e-07 | 8 |
mesonephros | 7.48e-07 | 9 |
pronephros | 7.48e-07 | 9 |
nephrogenic cord | 7.48e-07 | 9 |
pronephric mesoderm | 7.48e-07 | 9 |
rostral part of nephrogenic cord | 7.48e-07 | 9 |
presumptive pronephric mesoderm | 7.48e-07 | 9 |