FFCP PHASE1:Hg19::chr1:75600067..75600094,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:75600067..75600094,+
|short_description=p2@LHX8
|description=CAGE_peak_2_at_LHX8_5end
|association_with_transcript=-472bp_to_ENST00000356261,uc001dgq.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=431707 | |EntrezGene=431707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28838 | |HGNC=28838 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGE3 | |UniProt=E9PGE3 | ||
|association_with_transcript=-472bp_to_ENST00000356261,uc001dgq.2_5end | |||
|cluster_id=chr1:75600067..75600094,+ | |||
|coexpression_cluster_id=C3996 | |||
|description=CAGE_peak_2_at_LHX8_5end | |||
|id=chr1:75600067..75600094,+ | |||
|ontology_enrichment_celltype=CL:0002556!4.77e-25!6;CL:0002552!2.78e-21!5;CL:0000057!4.84e-15!75;CL:0002580!6.14e-13!3;CL:0002617!7.42e-09!2;CL:0000055!9.50e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002556;1.18e-46;6!CL:0002552;1.75e-39;5!CL:0002580;2.00e-23;3!CL:0000057;1.77e-09;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,9.31e-47,6;CL:0002552,1.75e-39,5;CL:0002580,2.17e-23,3;CL:0000057,2.34e-20,76 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.74e-09;1!UBERON:0003852;1.74e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@LHX8 | |||
}} | }} |
Latest revision as of 05:36, 19 September 2015
Short description: | p2@LHX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LHX8_5end |
Coexpression cluster: | C3996_Fibroblast_normal_Preadipocyte_tenocyte_cholangiocellular_medulloblastoma_liposarcoma |
Association with transcript: | -472bp_to_ENST00000356261, uc001dgq.2_5end |
EntrezGene: | LHX8 |
HGNC: | 28838 |
UniProt: | E9PGE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 9.31e-47 | 6 |
fibroblast of gingiva | 1.75e-39 | 5 |
preadipocyte of the breast | 2.17e-23 | 3 |
fibroblast | 2.34e-20 | 76 |