FFCP PHASE1:Hg19::chr11:118023653..118023665,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6330 | |EntrezGene=6330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10592 | |HGNC=10592 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPT5,Q8IWT1,B0YJ93 | |UniProt=E9PPT5,Q8IWT1,B0YJ93 | ||
|association_with_transcript=-23bp_to_NM_001142348,NM_174934,uc001pse.2,uc010rxv.1_5end | |association_with_transcript=-23bp_to_NM_001142348,NM_174934,uc001pse.2,uc010rxv.1_5end | ||
|cluster_id=chr11:118023653..118023665,- | |||
|coexpression_cluster_id=C3089 | |coexpression_cluster_id=C3089 | ||
|description=CAGE_peak_5_at_SCN4B_5end | |description=CAGE_peak_5_at_SCN4B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.72e-14;3!UBERON:0003057;4.72e-14;3!UBERON:0006222;1.60e-11;1!UBERON:0006601;1.03e-10;82 | |ontology_enrichment_development_v019=UBERON:0006241;4.72e-14;3!UBERON:0003057;4.72e-14;3!UBERON:0006222;1.60e-11;1!UBERON:0006601;1.03e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@SCN4B | |short_description=p5@SCN4B | ||
}} | }} |
Latest revision as of 23:13, 15 September 2015
Short description: | p5@SCN4B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCN4B_5end |
Coexpression cluster: | C3089_caudate_pons_diencephalon_locus_parietal_globus_paracentral |
Association with transcript: | -23bp_to_NM_001142348, NM_174934, uc001pse.2, uc010rxv.1_5end |
EntrezGene: | SCN4B |
HGNC: | 10592 |
UniProt: | E9PPT5Q8IWT1B0YJ93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data