FFCP PHASE1:Hg19::chr8:59508625..59508640,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-164bp_to_ENST00000523177_5end | |association_with_transcript=-164bp_to_ENST00000523177_5end | ||
|cluster_id=chr8:59508625..59508640,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_13_at_NSMAF_5end | |description=CAGE_peak_13_at_NSMAF_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.13e-49!42;CL:0000860!6.29e-45!45;CL:0000766!1.83e-44!76;CL:0002194!2.71e-39!63;CL:0000576!2.71e-39!63;CL:0000040!2.71e-39!63;CL:0000559!2.71e-39!63;CL:0000839!3.11e-39!70;CL:0000557!1.94e-38!71;CL:0002009!1.38e-37!65;CL:0000738!3.80e-36!140;CL:0002031!1.95e-32!124;CL:0002087!8.40e-32!119;CL:0002032!4.36e-28!165;CL:0000837!4.36e-28!165;CL:0000763!1.75e-27!112;CL:0000049!1.75e-27!112;CL:0000037!5.37e-27!172;CL:0000566!5.37e-27!172;CL:0000988!3.18e-24!182;CL:0000219!5.44e-12!390;CL:0000134!2.74e-10!358;CL:0002320!1.23e-09!365;CL:0000048!6.04e-07!430;CL:0000034!8.00e-07!444 | |ontology_enrichment_celltype=CL:0002057!3.13e-49!42;CL:0000860!6.29e-45!45;CL:0000766!1.83e-44!76;CL:0002194!2.71e-39!63;CL:0000576!2.71e-39!63;CL:0000040!2.71e-39!63;CL:0000559!2.71e-39!63;CL:0000839!3.11e-39!70;CL:0000557!1.94e-38!71;CL:0002009!1.38e-37!65;CL:0000738!3.80e-36!140;CL:0002031!1.95e-32!124;CL:0002087!8.40e-32!119;CL:0002032!4.36e-28!165;CL:0000837!4.36e-28!165;CL:0000763!1.75e-27!112;CL:0000049!1.75e-27!112;CL:0000037!5.37e-27!172;CL:0000566!5.37e-27!172;CL:0000988!3.18e-24!182;CL:0000219!5.44e-12!390;CL:0000134!2.74e-10!358;CL:0002320!1.23e-09!365;CL:0000048!6.04e-07!430;CL:0000034!8.00e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.78e-114;33!CL:0002057;5.78e-114;33!CL:0000473;4.55e-84;39!CL:0000234;4.55e-84;39!CL:0000576;4.06e-61;48!CL:0000766;1.37e-37;69!CL:0000763;5.76e-20;100!CL:0002087;9.53e-16;104!CL:0000738;1.32e-10;136 | |ontology_enrichment_celltype_v019=CL:0000860;5.78e-114;33!CL:0002057;5.78e-114;33!CL:0000473;4.55e-84;39!CL:0000234;4.55e-84;39!CL:0000576;4.06e-61;48!CL:0000766;1.37e-37;69!CL:0000763;5.76e-20;100!CL:0002087;9.53e-16;104!CL:0000738;1.32e-10;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-103,42;CL:0002057,1.04e-103,42;CL:0000473,8.45e-96,48;CL:0000234,8.45e-96,48;CL:0002194,4.62e-80,59;CL:0000576,4.62e-80,59;CL:0000040,4.62e-80,59;CL:0000559,4.62e-80,59;CL:0000766,1.60e-77,72;CL:0002009,2.99e-77,61;CL:0000839,5.86e-71,66;CL:0000557,8.23e-70,67;CL:0000763,1.78e-49,108;CL:0000049,1.78e-49,108;CL:0002087,1.58e-40,115;CL:0000738,3.26e-40,136;CL:0002031,1.49e-38,120;CL:0002032,7.75e-33,161;CL:0000837,7.75e-33,161;CL:0000037,3.67e-31,168;CL:0000988,3.35e-29,177;CL:0000134,8.56e-11,354;CL:0002320,1.96e-10,361;CL:0000219,5.72e-10,386;CL:0000034,2.44e-09,441;CL:0000048,2.40e-08,427;CL:0000723,4.04e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.02e-76;42!CL:0000049;4.29e-16;108 | |ontology_enrichment_development_v019=CL:0002057;4.02e-76;42!CL:0000049;4.29e-16;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.03e-35!80;UBERON:0001474!1.02e-31!86;UBERON:0002390!2.52e-29!102;UBERON:0003061!2.52e-29!102;UBERON:0002193!2.62e-27!112;UBERON:0004765!1.42e-25!101;UBERON:0001434!1.42e-25!101;UBERON:0002405!1.23e-24!115;UBERON:0002204!2.42e-12!167;UBERON:0002384!9.24e-09!375;UBERON:0003081!1.71e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!2.03e-35!80;UBERON:0001474!1.02e-31!86;UBERON:0002390!2.52e-29!102;UBERON:0003061!2.52e-29!102;UBERON:0002193!2.62e-27!112;UBERON:0004765!1.42e-25!101;UBERON:0001434!1.42e-25!101;UBERON:0002405!1.23e-24!115;UBERON:0002204!2.42e-12!167;UBERON:0002384!9.24e-09!375;UBERON:0003081!1.71e-08!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.01e-61,76;UBERON:0001474,6.52e-56,82;UBERON:0004765,2.27e-50,90;UBERON:0002405,1.55e-48,93;UBERON:0002390,1.01e-45,98;UBERON:0003061,1.01e-45,98;UBERON:0001434,1.12e-44,100;UBERON:0002193,7.13e-41,108;UBERON:0002204,9.86e-26,167;UBERON:0003081,1.72e-18,203;UBERON:0000926,4.02e-11,315;UBERON:0004120,4.02e-11,315;UBERON:0006603,4.02e-11,315;UBERON:0002384,6.05e-10,371 | |||
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| ||
|short_description=p13@NSMAF | |short_description=p13@NSMAF | ||
}} | }} |
Latest revision as of 15:39, 18 September 2015
Short description: | p13@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NSMAF_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -164bp_to_ENST00000523177_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.04e-103 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-103 | 42 |
defensive cell | 8.45e-96 | 48 |
phagocyte | 8.45e-96 | 48 |
monopoietic cell | 4.62e-80 | 59 |
monocyte | 4.62e-80 | 59 |
monoblast | 4.62e-80 | 59 |
promonocyte | 4.62e-80 | 59 |
myeloid leukocyte | 1.60e-77 | 72 |
macrophage dendritic cell progenitor | 2.99e-77 | 61 |
myeloid lineage restricted progenitor cell | 5.86e-71 | 66 |
granulocyte monocyte progenitor cell | 8.23e-70 | 67 |
myeloid cell | 1.78e-49 | 108 |
common myeloid progenitor | 1.78e-49 | 108 |
nongranular leukocyte | 1.58e-40 | 115 |
leukocyte | 3.26e-40 | 136 |
hematopoietic lineage restricted progenitor cell | 1.49e-38 | 120 |
hematopoietic oligopotent progenitor cell | 7.75e-33 | 161 |
hematopoietic multipotent progenitor cell | 7.75e-33 | 161 |
hematopoietic stem cell | 3.67e-31 | 168 |
hematopoietic cell | 3.35e-29 | 177 |
mesenchymal cell | 8.56e-11 | 354 |
connective tissue cell | 1.96e-10 | 361 |
motile cell | 5.72e-10 | 386 |
stem cell | 2.44e-09 | 441 |
multi fate stem cell | 2.40e-08 | 427 |
somatic stem cell | 4.04e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.01e-61 | 76 |
bone element | 6.52e-56 | 82 |
skeletal element | 2.27e-50 | 90 |
immune system | 1.55e-48 | 93 |
hematopoietic system | 1.01e-45 | 98 |
blood island | 1.01e-45 | 98 |
skeletal system | 1.12e-44 | 100 |
hemolymphoid system | 7.13e-41 | 108 |
musculoskeletal system | 9.86e-26 | 167 |
lateral plate mesoderm | 1.72e-18 | 203 |
mesoderm | 4.02e-11 | 315 |
mesoderm-derived structure | 4.02e-11 | 315 |
presumptive mesoderm | 4.02e-11 | 315 |
connective tissue | 6.05e-10 | 371 |