FFCP PHASE1:Hg19::chr4:41361545..41361556,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:41361545..41361556,- | |||
|description=CAGE_peak_at_chr4:41361545..41361556,- | |description=CAGE_peak_at_chr4:41361545..41361556,- | ||
|id=chr4:41361545..41361556,- | |id=chr4:41361545..41361556,- | ||
|ontology_enrichment_celltype=CL:0002150!2.34e-15!3;CL:0000861!2.34e-15!3;CL:0000082!3.67e-11!19;CL:0000066!4.27e-08!254;CL:0000322!2.60e-07!3 | |ontology_enrichment_celltype=CL:0002150!2.34e-15!3;CL:0000861!2.34e-15!3;CL:0000082!3.67e-11!19;CL:0000066!4.27e-08!254;CL:0000322!2.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.03e-17;1!CL:0000164;1.03e-17;1!CL:0000502;1.03e-17;1!CL:0000172;1.03e-17;1!CL:0000173;1.03e-17;1!CL:0000322;6.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0000167;1.03e-17;1!CL:0000164;1.03e-17;1!CL:0000502;1.03e-17;1!CL:0000172;1.03e-17;1!CL:0000173;1.03e-17;1!CL:0000322;6.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.70e-17,1;CL:0000164,1.70e-17,1;CL:0000502,1.70e-17,1;CL:0000172,1.70e-17,1;CL:0000173,1.70e-17,1;CL:0002351,1.70e-17,1;CL:0000066,5.12e-07,253;CL:0000322,6.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;1.03e-17;1!UBERON:0008947;2.11e-14;29 | |ontology_enrichment_development_v019=CL:0002351;1.03e-17;1!UBERON:0008947;2.11e-14;29 | ||
|ontology_enrichment_disease=DOID:305!6.51e-20!106;DOID:0050687!1.17e-17!143;DOID:1324!9.83e-11!15;DOID:162!4.09e-10!235;DOID:0050615!5.05e-10!16;DOID:14566!9.00e-10!239;DOID:169!2.03e-07!6 | |ontology_enrichment_disease=DOID:305!6.51e-20!106;DOID:0050687!1.17e-17!143;DOID:1324!9.83e-11!15;DOID:162!4.09e-10!235;DOID:0050615!5.05e-10!16;DOID:14566!9.00e-10!239;DOID:169!2.03e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.03e-17;1!DOID:3910;1.03e-09;2 | |ontology_enrichment_disease_v019=DOID:4430;1.03e-17;1!DOID:3910;1.03e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,1.70e-17,1;DOID:305,6.91e-15,106;DOID:0050687,3.59e-13,143;DOID:3910,9.46e-10,2;DOID:162,3.37e-09,235;DOID:14566,5.49e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0008947!1.54e-44!38;UBERON:0003258!1.54e-44!38;UBERON:0001737!1.52e-41!9;UBERON:0000065!2.80e-37!53;UBERON:0001004!8.73e-29!72;UBERON:0000072!9.45e-29!46;UBERON:0001557!3.91e-23!19;UBERON:0001041!7.92e-22!98;UBERON:0000077!1.56e-21!130;UBERON:0002048!2.91e-19!22;UBERON:0000117!2.91e-19!22;UBERON:0000171!2.91e-19!22;UBERON:0000170!2.91e-19!22;UBERON:0005597!2.91e-19!22;UBERON:0000118!2.91e-19!22;UBERON:0004921!1.44e-16!129;UBERON:0004185!1.44e-16!129;UBERON:0004119!2.82e-16!169;UBERON:0000925!2.82e-16!169;UBERON:0006595!2.82e-16!169;UBERON:0001007!1.91e-15!155;UBERON:0001555!1.91e-15!155;UBERON:0007026!1.91e-15!155;UBERON:0005178!3.35e-14!34;UBERON:0002224!3.35e-14!34;UBERON:0005181!9.84e-14!35;UBERON:0005153!6.46e-13!37;UBERON:0001048!1.17e-12!168;UBERON:0000063!1.93e-11!97;UBERON:0004802!3.67e-11!19;UBERON:0000115!3.67e-11!19;UBERON:0003104!9.75e-11!238;UBERON:0009142!9.75e-11!238;UBERON:0002294!1.52e-10!7;UBERON:0001173!1.52e-10!7;UBERON:0004912!1.52e-10!7;UBERON:0005911!2.99e-09!82;UBERON:0005157!8.83e-09!51;UBERON:0000915!1.53e-08!52;UBERON:0000466!1.11e-07!126;UBERON:0000464!1.13e-07!104;UBERON:0005177!2.58e-07!107;UBERON:0004821!2.60e-07!3;UBERON:0003215!2.60e-07!3;UBERON:0002299!2.60e-07!3;UBERON:0006524!2.60e-07!3;UBERON:0008874!2.60e-07!3;UBERON:0002169!2.60e-07!3;UBERON:0004894!2.60e-07!3;UBERON:0004807!2.87e-07!28;UBERON:0009569!9.37e-07!113;UBERON:0002110!9.62e-07!3;UBERON:0006242!9.62e-07!3 | |ontology_enrichment_uberon=UBERON:0008947!1.54e-44!38;UBERON:0003258!1.54e-44!38;UBERON:0001737!1.52e-41!9;UBERON:0000065!2.80e-37!53;UBERON:0001004!8.73e-29!72;UBERON:0000072!9.45e-29!46;UBERON:0001557!3.91e-23!19;UBERON:0001041!7.92e-22!98;UBERON:0000077!1.56e-21!130;UBERON:0002048!2.91e-19!22;UBERON:0000117!2.91e-19!22;UBERON:0000171!2.91e-19!22;UBERON:0000170!2.91e-19!22;UBERON:0005597!2.91e-19!22;UBERON:0000118!2.91e-19!22;UBERON:0004921!1.44e-16!129;UBERON:0004185!1.44e-16!129;UBERON:0004119!2.82e-16!169;UBERON:0000925!2.82e-16!169;UBERON:0006595!2.82e-16!169;UBERON:0001007!1.91e-15!155;UBERON:0001555!1.91e-15!155;UBERON:0007026!1.91e-15!155;UBERON:0005178!3.35e-14!34;UBERON:0002224!3.35e-14!34;UBERON:0005181!9.84e-14!35;UBERON:0005153!6.46e-13!37;UBERON:0001048!1.17e-12!168;UBERON:0000063!1.93e-11!97;UBERON:0004802!3.67e-11!19;UBERON:0000115!3.67e-11!19;UBERON:0003104!9.75e-11!238;UBERON:0009142!9.75e-11!238;UBERON:0002294!1.52e-10!7;UBERON:0001173!1.52e-10!7;UBERON:0004912!1.52e-10!7;UBERON:0005911!2.99e-09!82;UBERON:0005157!8.83e-09!51;UBERON:0000915!1.53e-08!52;UBERON:0000466!1.11e-07!126;UBERON:0000464!1.13e-07!104;UBERON:0005177!2.58e-07!107;UBERON:0004821!2.60e-07!3;UBERON:0003215!2.60e-07!3;UBERON:0002299!2.60e-07!3;UBERON:0006524!2.60e-07!3;UBERON:0008874!2.60e-07!3;UBERON:0002169!2.60e-07!3;UBERON:0004894!2.60e-07!3;UBERON:0004807!2.87e-07!28;UBERON:0009569!9.37e-07!113;UBERON:0002110!9.62e-07!3;UBERON:0006242!9.62e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.95e-17;9!UBERON:0001557;3.95e-17;9!UBERON:0004903;1.03e-09;2!UBERON:0002173;1.03e-09;2!UBERON:0002186;1.03e-09;2!UBERON:0000072;1.97e-08;37!UBERON:0000058;1.20e-07;10!UBERON:0004821;6.88e-07;3!UBERON:0007499;6.88e-07;3!UBERON:0003215;6.88e-07;3!UBERON:0010368;6.88e-07;3!UBERON:0009911;6.88e-07;3!UBERON:0002299;6.88e-07;3!UBERON:0006524;6.88e-07;3!UBERON:0008874;6.88e-07;3!UBERON:0002169;6.88e-07;3!UBERON:0004894;6.88e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001737;3.95e-17;9!UBERON:0001557;3.95e-17;9!UBERON:0004903;1.03e-09;2!UBERON:0002173;1.03e-09;2!UBERON:0002186;1.03e-09;2!UBERON:0000072;1.97e-08;37!UBERON:0000058;1.20e-07;10!UBERON:0004821;6.88e-07;3!UBERON:0007499;6.88e-07;3!UBERON:0003215;6.88e-07;3!UBERON:0010368;6.88e-07;3!UBERON:0009911;6.88e-07;3!UBERON:0002299;6.88e-07;3!UBERON:0006524;6.88e-07;3!UBERON:0008874;6.88e-07;3!UBERON:0002169;6.88e-07;3!UBERON:0004894;6.88e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.16e-17,9;UBERON:0008947,4.72e-11,38;UBERON:0003258,4.72e-11,38;UBERON:0004903,9.46e-10,2;UBERON:0002173,9.46e-10,2;UBERON:0002186,9.46e-10,2;UBERON:0000072,6.13e-09,47;UBERON:0001557,1.75e-08,19;UBERON:0000065,8.88e-08,54;UBERON:0004821,6.50e-07,3;UBERON:0003215,6.50e-07,3;UBERON:0010368,6.50e-07,3;UBERON:0009911,6.50e-07,3;UBERON:0002299,6.50e-07,3;UBERON:0006524,6.50e-07,3;UBERON:0008874,6.50e-07,3;UBERON:0002169,6.50e-07,3;UBERON:0004894,6.50e-07,3 | |||
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|short_description=p@chr4:41361545..41361556,- | |short_description=p@chr4:41361545..41361556,- | ||
}} | }} |
Latest revision as of 05:14, 30 July 2015
Short description: | p@chr4:41361545..41361556, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:41361545..41361556, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.70e-17 | 1 |
enteroendocrine cell | 1.70e-17 | 1 |
type D enteroendocrine cell | 1.70e-17 | 1 |
somatostatin secreting cell | 1.70e-17 | 1 |
pancreatic D cell | 1.70e-17 | 1 |
progenitor cell of endocrine pancreas | 1.70e-17 | 1 |
epithelial cell | 5.12e-07 | 253 |
pneumocyte | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.16e-17 | 9 |
respiratory primordium | 4.72e-11 | 38 |
endoderm of foregut | 4.72e-11 | 38 |
bronchoalveolar duct junction | 9.46e-10 | 2 |
alveolar duct | 9.46e-10 | 2 |
bronchiole | 9.46e-10 | 2 |
segment of respiratory tract | 6.13e-09 | 47 |
upper respiratory tract | 1.75e-08 | 19 |
respiratory tract | 8.88e-08 | 54 |
pulmonary alveolus epithelium | 6.50e-07 | 3 |
alveolus | 6.50e-07 | 3 |
pulmonary lobule | 6.50e-07 | 3 |
lobule | 6.50e-07 | 3 |
alveolus of lung | 6.50e-07 | 3 |
alveolar system | 6.50e-07 | 3 |
pulmonary acinus | 6.50e-07 | 3 |
alveolar sac | 6.50e-07 | 3 |
alveolar wall | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.70e-17 | 1 |
carcinoma | 6.91e-15 | 106 |
cell type cancer | 3.59e-13 | 143 |
lung adenocarcinoma | 9.46e-10 | 2 |
cancer | 3.37e-09 | 235 |
disease of cellular proliferation | 5.49e-09 | 239 |