FFCP PHASE1:Hg19::chr1:110198761..110198791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2948 | |EntrezGene=2948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4636 | |HGNC=4636 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000326729_5end | |association_with_transcript=17bp_to_ENST00000326729_5end | ||
|cluster_id=chr1:110198761..110198791,+ | |||
|coexpression_cluster_id=C3846 | |coexpression_cluster_id=C3846 | ||
|description=CAGE_peak_4_at_GSTM4_5end | |description=CAGE_peak_4_at_GSTM4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.03e-07;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.03e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.71e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.97e-09;31!UBERON:0004161;4.07e-08;11!UBERON:0009497;1.11e-07;13 | |ontology_enrichment_development_v019=UBERON:0003104;6.97e-09;31!UBERON:0004161;4.07e-08;11!UBERON:0009497;1.11e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.24e-09!129;UBERON:0004185!8.24e-09!129;UBERON:0001017!8.80e-08!82;UBERON:0007023!1.00e-07!115;UBERON:0005743!1.04e-07!86;UBERON:0001049!1.82e-07!57;UBERON:0005068!1.82e-07!57;UBERON:0006241!1.82e-07!57;UBERON:0007135!1.82e-07!57;UBERON:0000073!1.83e-07!94;UBERON:0001016!1.83e-07!94;UBERON:0000955!3.10e-07!69;UBERON:0006238!3.10e-07!69 | |ontology_enrichment_uberon=UBERON:0004921!8.24e-09!129;UBERON:0004185!8.24e-09!129;UBERON:0001017!8.80e-08!82;UBERON:0007023!1.00e-07!115;UBERON:0005743!1.04e-07!86;UBERON:0001049!1.82e-07!57;UBERON:0005068!1.82e-07!57;UBERON:0006241!1.82e-07!57;UBERON:0007135!1.82e-07!57;UBERON:0000073!1.83e-07!94;UBERON:0001016!1.83e-07!94;UBERON:0000955!3.10e-07!69;UBERON:0006238!3.10e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.39e-07;19!UBERON:0006925;5.39e-07;19!UBERON:0000160;6.68e-07;17!UBERON:0002423;8.36e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002107;5.39e-07;19!UBERON:0006925;5.39e-07;19!UBERON:0000160;6.68e-07;17!UBERON:0002423;8.36e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.25e-11,223;UBERON:0004921,6.99e-09,118;UBERON:0009856,5.92e-08,26;UBERON:0007499,1.67e-07,25;UBERON:0009497,3.16e-07,25;UBERON:0000015,3.16e-07,25;UBERON:0002423,3.16e-07,25;UBERON:0006235,3.16e-07,25;UBERON:0004161,3.16e-07,25;UBERON:0005172,3.94e-07,54;UBERON:0005173,3.94e-07,54;UBERON:0002107,4.10e-07,19;UBERON:0006925,4.10e-07,19;UBERON:0008836,4.10e-07,19;UBERON:0009854,4.89e-07,23;UBERON:0000160,5.05e-07,17;UBERON:0007023,6.02e-07,114 | |||
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| ||
|short_description=p4@GSTM4 | |short_description=p4@GSTM4 | ||
}} | }} |
Latest revision as of 22:39, 15 September 2015
Short description: | p4@GSTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GSTM4_5end |
Coexpression cluster: | C3846_astrocytoma_alveolar_mesothelioma_small_mucinous_Pericytes_Mesenchymal |
Association with transcript: | 17bp_to_ENST00000326729_5end |
EntrezGene: | GSTM4 |
HGNC: | 4636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.71e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.25e-11 | 223 |
subdivision of digestive tract | 6.99e-09 | 118 |
sac | 5.92e-08 | 26 |
epithelial sac | 1.67e-07 | 25 |
epithelium of foregut-midgut junction | 3.16e-07 | 25 |
anatomical boundary | 3.16e-07 | 25 |
hepatobiliary system | 3.16e-07 | 25 |
foregut-midgut junction | 3.16e-07 | 25 |
septum transversum | 3.16e-07 | 25 |
abdomen element | 3.94e-07 | 54 |
abdominal segment element | 3.94e-07 | 54 |
liver | 4.10e-07 | 19 |
digestive gland | 4.10e-07 | 19 |
liver bud | 4.10e-07 | 19 |
digestive tract diverticulum | 4.89e-07 | 23 |
intestine | 5.05e-07 | 17 |
adult organism | 6.02e-07 | 114 |