FFCP PHASE1:Hg19::chr5:167182003..167182007,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:167182003..167182007,- | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_at_chr5:167182003..167182007,- | |description=CAGE_peak_at_chr5:167182003..167182007,- | ||
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|ontology_enrichment_celltype=CL:0000076!6.58e-09!62;CL:0000064!8.82e-09!3;CL:0005012!8.82e-09!3;CL:0000067!8.82e-09!3;CL:0002304!8.82e-09!3;CL:0000066!2.79e-08!254;CL:0002076!4.41e-08!43;CL:0000221!7.91e-07!71;CL:0000575!9.67e-07!2 | |ontology_enrichment_celltype=CL:0000076!6.58e-09!62;CL:0000064!8.82e-09!3;CL:0005012!8.82e-09!3;CL:0000067!8.82e-09!3;CL:0002304!8.82e-09!3;CL:0000066!2.79e-08!254;CL:0002076!4.41e-08!43;CL:0000221!7.91e-07!71;CL:0000575!9.67e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000575;3.34e-27;2!CL:1001319;7.63e-15;1!CL:1000600;7.63e-15;1!CL:0000054;7.78e-08;2!CL:0000137;7.78e-08;2!CL:0000092;7.78e-08;2 | |ontology_enrichment_celltype_v019=CL:0000575;3.34e-27;2!CL:1001319;7.63e-15;1!CL:1000600;7.63e-15;1!CL:0000054;7.78e-08;2!CL:0000137;7.78e-08;2!CL:0000092;7.78e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.39e-27,2;CL:1001319,7.13e-15,1;CL:1000600,7.13e-15,1;CL:0000221,3.61e-08,72;CL:0000054,9.19e-08,2;CL:0000137,9.19e-08,2;CL:0000092,9.19e-08,2;CL:0000076,2.47e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.82e-08;2!UBERON:0010056;3.82e-08;2 | |ontology_enrichment_development_v019=UBERON:0008814;3.82e-08;2!UBERON:0010056;3.82e-08;2 | ||
|ontology_enrichment_disease=DOID:0050687!5.66e-13!143;DOID:1749!1.42e-10!14;DOID:162!1.55e-08!235;DOID:171!2.24e-08!10;DOID:14566!3.76e-08!239;DOID:305!5.21e-08!106;DOID:7!6.38e-08!39 | |ontology_enrichment_disease=DOID:0050687!5.66e-13!143;DOID:1749!1.42e-10!14;DOID:162!1.55e-08!235;DOID:171!2.24e-08!10;DOID:14566!3.76e-08!239;DOID:305!5.21e-08!106;DOID:7!6.38e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:0060085;2.25e-14;1!DOID:3165;2.25e-14;1!DOID:0060121;2.25e-14;1!DOID:2438;2.25e-14;1!DOID:4418;2.25e-14;1!DOID:1749;3.03e-09;14!DOID:154;4.09e-08;2!DOID:4236;4.09e-08;2!DOID:200;7.78e-08;2!DOID:4305;7.78e-08;2 | |ontology_enrichment_disease_v019=DOID:0060085;2.25e-14;1!DOID:3165;2.25e-14;1!DOID:0060121;2.25e-14;1!DOID:2438;2.25e-14;1!DOID:4418;2.25e-14;1!DOID:1749;3.03e-09;14!DOID:154;4.09e-08;2!DOID:4236;4.09e-08;2!DOID:200;7.78e-08;2!DOID:4305;7.78e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.15e-14,1;DOID:3165,3.15e-14,1;DOID:0060121,3.15e-14,1;DOID:2438,3.15e-14,1;DOID:4418,3.15e-14,1;DOID:1749,2.99e-09,14;DOID:154,4.09e-08,2;DOID:4236,4.09e-08,2;DOID:200,9.19e-08,2;DOID:4305,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!5.83e-11!4;UBERON:0003729!8.15e-09!5;UBERON:0001778!8.82e-09!3;UBERON:0001775!8.82e-09!3;UBERON:0001801!1.75e-08!14;UBERON:0000344!1.45e-07!12;UBERON:0002203!2.79e-07!6;UBERON:0001768!2.79e-07!6 | |ontology_enrichment_uberon=UBERON:0000488!5.83e-11!4;UBERON:0003729!8.15e-09!5;UBERON:0001778!8.82e-09!3;UBERON:0001775!8.82e-09!3;UBERON:0001801!1.75e-08!14;UBERON:0000344!1.45e-07!12;UBERON:0002203!2.79e-07!6;UBERON:0001768!2.79e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.63e-15;1!UBERON:0001256;7.63e-15;1!UBERON:0001259;7.63e-15;1!UBERON:0000964;3.98e-14;4!UBERON:0010409;3.98e-14;4!UBERON:0000020;1.73e-09;23!UBERON:0001032;4.20e-09;24!UBERON:0004456;4.20e-09;24!UBERON:0001801;4.95e-09;14!UBERON:0001255;4.53e-08;2!UBERON:0001556;4.53e-08;2!UBERON:0000019;8.63e-07;19!UBERON:0000047;8.63e-07;19!UBERON:0004088;8.63e-07;19!UBERON:0010230;8.63e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0004645;7.63e-15;1!UBERON:0001256;7.63e-15;1!UBERON:0001259;7.63e-15;1!UBERON:0000964;3.98e-14;4!UBERON:0010409;3.98e-14;4!UBERON:0000020;1.73e-09;23!UBERON:0001032;4.20e-09;24!UBERON:0004456;4.20e-09;24!UBERON:0001801;4.95e-09;14!UBERON:0001255;4.53e-08;2!UBERON:0001556;4.53e-08;2!UBERON:0000019;8.63e-07;19!UBERON:0000047;8.63e-07;19!UBERON:0004088;8.63e-07;19!UBERON:0010230;8.63e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.13e-15,1;UBERON:0001256,7.13e-15,1;UBERON:0001259,7.13e-15,1;UBERON:0000964,3.37e-14,4;UBERON:0010409,3.37e-14,4;UBERON:0004348,3.37e-14,4;UBERON:0005427,3.37e-14,4;UBERON:0000020,3.86e-09,24;UBERON:0001032,3.86e-09,24;UBERON:0004456,3.86e-09,24;UBERON:0001801,4.43e-09,14;UBERON:0001255,4.38e-08,2;UBERON:0001556,4.38e-08,2;UBERON:0005085,4.82e-07,31 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,1.55210578223795,0.527008714158756,0,2.5500670180478,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0.462942225792648,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,1.47024129588619,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,2.60379656828827,1.19228767021794,0,0,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0,2.03856309110421,1.35983700206033,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.385239660814607,0.428883182749851,4.4369029634086,0,0,0,0,0,0,0.706756583783524,0.578742114812744,0,0,0,0,0,0,0,0,8.84546591885314,0,0,0,0,0,0,0,0,0,0,0.107824811396682,3.77438260454151,0,0.169732529954025,0.212574920101683,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0.366857197043358,20.6790942409105,0,0,0.397832444232549,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,32.8192230695593,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,4.72138957943652,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:167182003..167182007,- | |short_description=p@chr5:167182003..167182007,- | ||
}} | }} |
Latest revision as of 12:42, 30 July 2015
Short description: | p@chr5:167182003..167182007, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167182003..167182007, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.39e-27 | 2 |
bladder cell | 7.13e-15 | 1 |
lower urinary tract cell | 7.13e-15 | 1 |
ectodermal cell | 3.61e-08 | 72 |
bone matrix secreting cell | 9.19e-08 | 2 |
osteocyte | 9.19e-08 | 2 |
osteoclast | 9.19e-08 | 2 |
squamous epithelial cell | 2.47e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.13e-15 | 1 |
wall of urinary bladder | 7.13e-15 | 1 |
mucosa of urinary bladder | 7.13e-15 | 1 |
cornea | 3.37e-14 | 4 |
eye surface | 3.37e-14 | 4 |
optic eminence | 3.37e-14 | 4 |
corneal primordium | 3.37e-14 | 4 |
sense organ | 3.86e-09 | 24 |
sensory system | 3.86e-09 | 24 |
entire sense organ system | 3.86e-09 | 24 |
anterior segment of eyeball | 4.43e-09 | 14 |
urinary bladder | 4.38e-08 | 2 |
lower urinary tract | 4.38e-08 | 2 |
ectodermal placode | 4.82e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.15e-14 | 1 |
skin benign neoplasm | 3.15e-14 | 1 |
integumentary system benign neoplasm | 3.15e-14 | 1 |
dermis tumor | 3.15e-14 | 1 |
cutaneous fibrous histiocytoma | 3.15e-14 | 1 |
squamous cell carcinoma | 2.99e-09 | 14 |
mixed cell type cancer | 4.09e-08 | 2 |
carcinosarcoma | 4.09e-08 | 2 |
giant cell tumor | 9.19e-08 | 2 |
bone giant cell tumor | 9.19e-08 | 2 |