FFCP PHASE1:Hg19::chr11:74857404..74857406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:74857404..74857406,- | |||
|coexpression_cluster_id=C122 | |coexpression_cluster_id=C122 | ||
|description=CAGE_peak_at_chr11:74857404..74857406,- | |description=CAGE_peak_at_chr11:74857404..74857406,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!1.20e-09!4;CL:0002253!5.30e-09!2 | |ontology_enrichment_celltype=CL:0002563!1.20e-09!4;CL:0002253!5.30e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.04e-34;2!CL:0002563;8.69e-18;4!CL:0000333;1.83e-14;5 | |ontology_enrichment_celltype_v019=CL:0002253;5.04e-34;2!CL:0002563;8.69e-18;4!CL:0000333;1.83e-14;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.04e-34,2;CL:0002563,8.69e-18,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!3.07e-21!239;DOID:162!1.21e-20!235;DOID:0050687!1.63e-13!143;DOID:3119!2.11e-12!14;DOID:0050686!1.26e-11!137;DOID:305!4.23e-09!106;DOID:154!8.75e-09!2;DOID:4236!8.75e-09!2;DOID:1036!1.31e-07!8 | |ontology_enrichment_disease=DOID:14566!3.07e-21!239;DOID:162!1.21e-20!235;DOID:0050687!1.63e-13!143;DOID:3119!2.11e-12!14;DOID:0050686!1.26e-11!137;DOID:305!4.23e-09!106;DOID:154!8.75e-09!2;DOID:4236!8.75e-09!2;DOID:1036!1.31e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:169;2.74e-12;6!DOID:1036;1.24e-09;8!DOID:171;6.56e-08;10 | |ontology_enrichment_disease_v019=DOID:169;2.74e-12;6!DOID:1036;1.24e-09;8!DOID:171;6.56e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:169,2.74e-12,6;DOID:1036,1.24e-09,8;DOID:171,6.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.20e-09!4;UBERON:0001262!1.20e-09!4;UBERON:0004786!1.20e-09!4;UBERON:0004808!1.20e-09!4;UBERON:0001277!1.20e-09!4;UBERON:0001052!1.42e-09!4;UBERON:0000344!4.44e-08!12;UBERON:0003350!8.64e-08!5;UBERON:0004907!9.90e-08!5;UBERON:0003929!2.00e-07!54;UBERON:0000013!2.15e-07!5;UBERON:0002410!2.15e-07!5;UBERON:0000010!8.73e-07!8;UBERON:0001046!9.86e-07!19 | |ontology_enrichment_uberon=UBERON:0001242!1.20e-09!4;UBERON:0001262!1.20e-09!4;UBERON:0004786!1.20e-09!4;UBERON:0004808!1.20e-09!4;UBERON:0001277!1.20e-09!4;UBERON:0001052!1.42e-09!4;UBERON:0000344!4.44e-08!12;UBERON:0003350!8.64e-08!5;UBERON:0004907!9.90e-08!5;UBERON:0003929!2.00e-07!54;UBERON:0000013!2.15e-07!5;UBERON:0002410!2.15e-07!5;UBERON:0000010!8.73e-07!8;UBERON:0001046!9.86e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.69e-18;4!UBERON:0001242;8.69e-18;4!UBERON:0001262;8.69e-18;4!UBERON:0004786;8.69e-18;4!UBERON:0004808;8.69e-18;4!UBERON:0001277;8.69e-18;4!UBERON:0004907;1.60e-14;5!UBERON:0000013;1.83e-14;5!UBERON:0002410;1.83e-14;5!UBERON:0000485;8.99e-11;7!UBERON:0003929;8.99e-11;7!UBERON:0003350;1.35e-09;8!UBERON:0001155;1.12e-08;9!UBERON:0000010;1.21e-08;8!UBERON:0000059;2.47e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001052;8.69e-18;4!UBERON:0001242;8.69e-18;4!UBERON:0001262;8.69e-18;4!UBERON:0004786;8.69e-18;4!UBERON:0004808;8.69e-18;4!UBERON:0001277;8.69e-18;4!UBERON:0004907;1.60e-14;5!UBERON:0000013;1.83e-14;5!UBERON:0002410;1.83e-14;5!UBERON:0000485;8.99e-11;7!UBERON:0003929;8.99e-11;7!UBERON:0003350;1.35e-09;8!UBERON:0001155;1.12e-08;9!UBERON:0000010;1.21e-08;8!UBERON:0000059;2.47e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.69e-18,4;UBERON:0001242,8.69e-18,4;UBERON:0001262,8.69e-18,4;UBERON:0004786,8.69e-18,4;UBERON:0004808,8.69e-18,4;UBERON:0001277,8.69e-18,4;UBERON:0004907,1.60e-14,5;UBERON:0000013,1.83e-14,5;UBERON:0002410,1.83e-14,5;UBERON:0003350,1.35e-09,8;UBERON:0001155,1.12e-08,9;UBERON:0000485,1.12e-08,9;UBERON:0000010,1.21e-08,8;UBERON:0000059,2.47e-07,11 | |||
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| ||
|short_description=p@chr11:74857404..74857406,- | |short_description=p@chr11:74857404..74857406,- | ||
}} | }} |
Latest revision as of 02:31, 24 July 2015
Short description: | p@chr11:74857404..74857406, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:74857404..74857406, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.04e-34 | 2 |
intestinal epithelial cell | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.69e-18 | 4 |
intestinal mucosa | 8.69e-18 | 4 |
wall of intestine | 8.69e-18 | 4 |
gastrointestinal system mucosa | 8.69e-18 | 4 |
gastrointestinal system epithelium | 8.69e-18 | 4 |
intestinal epithelium | 8.69e-18 | 4 |
lower digestive tract | 1.60e-14 | 5 |
sympathetic nervous system | 1.83e-14 | 5 |
autonomic nervous system | 1.83e-14 | 5 |
epithelium of mucosa | 1.35e-09 | 8 |
colon | 1.12e-08 | 9 |
simple columnar epithelium | 1.12e-08 | 9 |
peripheral nervous system | 1.21e-08 | 8 |
large intestine | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.74e-12 | 6 |
chronic leukemia | 1.24e-09 | 8 |
neuroectodermal tumor | 6.56e-08 | 10 |