FFCP PHASE1:Hg19::chr2:33661382..33661445,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25780 | |EntrezGene=25780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14545 | |HGNC=14545 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV61,Q53SD7 | |UniProt=Q8IV61,Q53SD7 | ||
|association_with_transcript=0bp_to_ENST00000402538,ENST00000484909,NM_170672,uc002row.1,uc002rox.2_5end | |association_with_transcript=0bp_to_ENST00000402538,ENST00000484909,NM_170672,uc002row.1,uc002rox.2_5end | ||
|cluster_id=chr2:33661382..33661445,+ | |||
|coexpression_cluster_id=C428 | |coexpression_cluster_id=C428 | ||
|description=CAGE_peak_3_at_RASGRP3_5end | |description=CAGE_peak_3_at_RASGRP3_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.16e-24!24;CL:0000115!1.65e-21!35;CL:0000071!2.46e-18!18;CL:0002546!2.46e-18!18;CL:0002078!1.30e-14!44;CL:1000413!1.56e-09!9;CL:0000213!2.21e-09!57;CL:0000215!2.21e-09!57;CL:0000222!4.48e-09!119;CL:0005020!6.82e-08!6;CL:0002138!6.82e-08!6;CL:0005022!6.82e-08!6;CL:0002543!3.00e-07!6;CL:0002544!6.40e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.16e-24!24;CL:0000115!1.65e-21!35;CL:0000071!2.46e-18!18;CL:0002546!2.46e-18!18;CL:0002078!1.30e-14!44;CL:1000413!1.56e-09!9;CL:0000213!2.21e-09!57;CL:0000215!2.21e-09!57;CL:0000222!4.48e-09!119;CL:0005020!6.82e-08!6;CL:0002138!6.82e-08!6;CL:0005022!6.82e-08!6;CL:0002543!3.00e-07!6;CL:0002544!6.40e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.91e-34;24!CL:0000115;4.30e-26;36!CL:0000071;4.22e-25;18!CL:0002078;1.67e-14;45!CL:1000413;9.42e-13;9!CL:0002138;1.76e-10;6!CL:0000213;5.25e-10;58!CL:0000215;5.25e-10;58!CL:0002543;1.59e-09;6!CL:0002544;4.47e-09;6!CL:0002539;1.76e-07;10 | |ontology_enrichment_celltype_v019=CL:0002139;4.91e-34;24!CL:0000115;4.30e-26;36!CL:0000071;4.22e-25;18!CL:0002078;1.67e-14;45!CL:1000413;9.42e-13;9!CL:0002138;1.76e-10;6!CL:0000213;5.25e-10;58!CL:0000215;5.25e-10;58!CL:0002543;1.59e-09;6!CL:0002544;4.47e-09;6!CL:0002539;1.76e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.11e-34,24;CL:0000115,7.35e-31,36;CL:0000071,3.50e-25,18;CL:0002546,3.50e-25,18;CL:0002078,1.60e-22,45;CL:0000213,3.43e-15,58;CL:0000215,3.43e-15,58;CL:1000413,8.85e-13,9;CL:0000222,1.91e-12,121;CL:0005020,1.78e-10,6;CL:0002138,1.78e-10,6;CL:0005022,1.78e-10,6;CL:0002543,1.43e-09,6;CL:0002544,4.13e-09,6;CL:0002539,1.55e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;4.22e-25;18!CL:0005022;1.76e-10;6!UBERON:0004872;4.97e-07;7 | |ontology_enrichment_development_v019=CL:0002546;4.22e-25;18!CL:0005022;1.76e-10;6!UBERON:0004872;4.97e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.01e-36!115;UBERON:0004111!1.00e-33!241;UBERON:0000025!7.29e-32!194;UBERON:0000477!2.83e-30!286;UBERON:0000055!3.37e-29!69;UBERON:0004872!2.97e-28!84;UBERON:0001981!9.54e-26!60;UBERON:0007500!9.54e-26!60;UBERON:0004537!9.54e-26!60;UBERON:0006965!9.54e-26!60;UBERON:0002049!1.06e-23!79;UBERON:0007798!1.06e-23!79;UBERON:0001009!7.60e-23!113;UBERON:0004535!4.57e-21!110;UBERON:0003914!5.99e-21!118;UBERON:0001986!2.46e-18!18;UBERON:0004638!2.46e-18!18;UBERON:0004852!2.46e-18!18;UBERON:0000483!7.01e-18!309;UBERON:0000119!2.51e-17!312;UBERON:0001637!2.60e-15!42;UBERON:0003509!2.60e-15!42;UBERON:0004572!2.60e-15!42;UBERON:0000487!1.30e-13!22;UBERON:0001049!3.70e-13!57;UBERON:0005068!3.70e-13!57;UBERON:0006241!3.70e-13!57;UBERON:0007135!3.70e-13!57;UBERON:0004573!5.54e-13!33;UBERON:0004571!5.54e-13!33;UBERON:0000468!3.38e-11!659;UBERON:0006914!4.08e-11!25;UBERON:0000467!2.67e-10!625;UBERON:0000480!3.41e-10!626;UBERON:0003080!3.50e-10!42;UBERON:0000481!3.73e-10!347;UBERON:0000947!4.28e-10!21;UBERON:0010191!4.28e-10!21;UBERON:0002616!6.55e-10!59;UBERON:0002780!1.28e-09!41;UBERON:0001890!1.28e-09!41;UBERON:0006240!1.28e-09!41;UBERON:0003915!1.56e-09!9;UBERON:0004700!1.56e-09!9;UBERON:0001917!1.56e-09!9;UBERON:0000955!2.93e-09!69;UBERON:0006238!2.93e-09!69;UBERON:0003075!4.17e-09!86;UBERON:0007284!4.17e-09!86;UBERON:0001017!7.09e-09!82;UBERON:0000490!8.74e-09!138;UBERON:0005743!1.53e-08!86;UBERON:0002346!3.84e-08!90;UBERON:0002020!5.46e-08!34;UBERON:0003528!5.46e-08!34;UBERON:0007100!7.95e-08!27;UBERON:0001893!8.38e-08!34;UBERON:0000073!1.55e-07!94;UBERON:0001016!1.55e-07!94;UBERON:0002791!1.94e-07!33;UBERON:0000922!2.98e-07!612;UBERON:0001869!3.36e-07!32;UBERON:0000475!3.74e-07!365;UBERON:0002619!4.56e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!8.01e-36!115;UBERON:0004111!1.00e-33!241;UBERON:0000025!7.29e-32!194;UBERON:0000477!2.83e-30!286;UBERON:0000055!3.37e-29!69;UBERON:0004872!2.97e-28!84;UBERON:0001981!9.54e-26!60;UBERON:0007500!9.54e-26!60;UBERON:0004537!9.54e-26!60;UBERON:0006965!9.54e-26!60;UBERON:0002049!1.06e-23!79;UBERON:0007798!1.06e-23!79;UBERON:0001009!7.60e-23!113;UBERON:0004535!4.57e-21!110;UBERON:0003914!5.99e-21!118;UBERON:0001986!2.46e-18!18;UBERON:0004638!2.46e-18!18;UBERON:0004852!2.46e-18!18;UBERON:0000483!7.01e-18!309;UBERON:0000119!2.51e-17!312;UBERON:0001637!2.60e-15!42;UBERON:0003509!2.60e-15!42;UBERON:0004572!2.60e-15!42;UBERON:0000487!1.30e-13!22;UBERON:0001049!3.70e-13!57;UBERON:0005068!3.70e-13!57;UBERON:0006241!3.70e-13!57;UBERON:0007135!3.70e-13!57;UBERON:0004573!5.54e-13!33;UBERON:0004571!5.54e-13!33;UBERON:0000468!3.38e-11!659;UBERON:0006914!4.08e-11!25;UBERON:0000467!2.67e-10!625;UBERON:0000480!3.41e-10!626;UBERON:0003080!3.50e-10!42;UBERON:0000481!3.73e-10!347;UBERON:0000947!4.28e-10!21;UBERON:0010191!4.28e-10!21;UBERON:0002616!6.55e-10!59;UBERON:0002780!1.28e-09!41;UBERON:0001890!1.28e-09!41;UBERON:0006240!1.28e-09!41;UBERON:0003915!1.56e-09!9;UBERON:0004700!1.56e-09!9;UBERON:0001917!1.56e-09!9;UBERON:0000955!2.93e-09!69;UBERON:0006238!2.93e-09!69;UBERON:0003075!4.17e-09!86;UBERON:0007284!4.17e-09!86;UBERON:0001017!7.09e-09!82;UBERON:0000490!8.74e-09!138;UBERON:0005743!1.53e-08!86;UBERON:0002346!3.84e-08!90;UBERON:0002020!5.46e-08!34;UBERON:0003528!5.46e-08!34;UBERON:0007100!7.95e-08!27;UBERON:0001893!8.38e-08!34;UBERON:0000073!1.55e-07!94;UBERON:0001016!1.55e-07!94;UBERON:0002791!1.94e-07!33;UBERON:0000922!2.98e-07!612;UBERON:0001869!3.36e-07!32;UBERON:0000475!3.74e-07!365;UBERON:0002619!4.56e-07!22 | ||
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| ||
|short_description=p3@RASGRP3 | |short_description=p3@RASGRP3 | ||
}} | }} |
Latest revision as of 23:50, 16 September 2015
Short description: | p3@RASGRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RASGRP3_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 0bp_to_ENST00000402538, ENST00000484909, NM_170672, uc002row.1, uc002rox.2_5end |
EntrezGene: | RASGRP3 |
HGNC: | 14545 |
UniProt: | Q8IV61Q53SD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.11e-34 | 24 |
endothelial cell | 7.35e-31 | 36 |
blood vessel endothelial cell | 3.50e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.50e-25 | 18 |
meso-epithelial cell | 1.60e-22 | 45 |
lining cell | 3.43e-15 | 58 |
barrier cell | 3.43e-15 | 58 |
endothelial cell of artery | 8.85e-13 | 9 |
mesodermal cell | 1.91e-12 | 121 |
lymphangioblast | 1.78e-10 | 6 |
endothelial cell of lymphatic vessel | 1.78e-10 | 6 |
vascular lymphangioblast | 1.78e-10 | 6 |
vein endothelial cell | 1.43e-09 | 6 |
aortic endothelial cell | 4.13e-09 | 6 |
aortic smooth muscle cell | 1.55e-07 | 10 |