FFCP PHASE1:Hg19::chr9:137582780..137582797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1289 | |EntrezGene=1289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2209 | |HGNC=2209 | ||
|TSSclassifier=strong | |||
|UniProt=Q59EE7 | |UniProt=Q59EE7 | ||
|association_with_transcript=0bp_to_AB209864_5end | |association_with_transcript=0bp_to_AB209864_5end | ||
|cluster_id=chr9:137582780..137582797,+ | |||
|coexpression_cluster_id=C396 | |coexpression_cluster_id=C396 | ||
|description=CAGE_peak_11_at_COL5A1_5end | |description=CAGE_peak_11_at_COL5A1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.44e-21!180;CL:0000057!1.44e-13!75;CL:0000222!1.97e-09!119;CL:0000680!1.66e-08!57;CL:0000056!1.66e-08!57;CL:0000355!1.66e-08!57;CL:0000183!2.18e-08!59;CL:0000187!3.46e-08!54;CL:0002494!4.95e-07!16 | |ontology_enrichment_celltype=CL:0000055!3.44e-21!180;CL:0000057!1.44e-13!75;CL:0000222!1.97e-09!119;CL:0000680!1.66e-08!57;CL:0000056!1.66e-08!57;CL:0000355!1.66e-08!57;CL:0000183!2.18e-08!59;CL:0000187!3.46e-08!54;CL:0002494!4.95e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.59e-15;19!CL:0000134;1.68e-11;55!CL:0000048;1.62e-09;58!CL:0002569;2.67e-09;6!CL:0000723;3.41e-09;61!CL:0000034;1.29e-07;69!CL:0002570;6.00e-07;8 | |ontology_enrichment_celltype_v019=CL:0000349;3.59e-15;19!CL:0000134;1.68e-11;55!CL:0000048;1.62e-09;58!CL:0002569;2.67e-09;6!CL:0000723;3.41e-09;61!CL:0000034;1.29e-07;69!CL:0002570;6.00e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.06e-15,19;CL:0000057,1.05e-11,76;CL:0002569,3.10e-09,6;CL:0000048,3.77e-08,427;CL:0000723,1.00e-07,433;CL:0000034,3.49e-07,441;CL:0002320,3.82e-07,361;CL:0002570,6.26e-07,8;CL:0000134,6.85e-07,354 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.59e-11!84;UBERON:0002385!1.16e-08!63;UBERON:0001015!1.16e-08!63;UBERON:0000383!1.16e-08!63;UBERON:0004535!1.40e-08!110;UBERON:0000478!1.83e-08!24;UBERON:0001134!2.29e-08!61;UBERON:0002036!2.29e-08!61;UBERON:0003082!2.29e-08!61;UBERON:0003914!4.95e-08!118;UBERON:0002049!5.23e-08!79;UBERON:0007798!5.23e-08!79;UBERON:0001009!7.14e-08!113;UBERON:0000914!1.20e-07!83;UBERON:0002329!1.20e-07!83;UBERON:0003077!1.20e-07!83;UBERON:0003059!1.20e-07!83;UBERON:0007282!1.20e-07!83;UBERON:0009618!1.20e-07!83;UBERON:0007285!1.20e-07!83;UBERON:0005631!1.21e-07!14;UBERON:0000158!1.21e-07!14;UBERON:0004290!2.73e-07!70;UBERON:0000948!9.21e-07!24;UBERON:0005498!9.21e-07!24;UBERON:0004140!9.21e-07!24;UBERON:0009881!9.21e-07!24;UBERON:0004141!9.21e-07!24;UBERON:0003084!9.21e-07!24;UBERON:0007005!9.21e-07!24;UBERON:0004139!9.21e-07!24;UBERON:0004291!9.21e-07!24 | |ontology_enrichment_uberon=UBERON:0004872!1.59e-11!84;UBERON:0002385!1.16e-08!63;UBERON:0001015!1.16e-08!63;UBERON:0000383!1.16e-08!63;UBERON:0004535!1.40e-08!110;UBERON:0000478!1.83e-08!24;UBERON:0001134!2.29e-08!61;UBERON:0002036!2.29e-08!61;UBERON:0003082!2.29e-08!61;UBERON:0003914!4.95e-08!118;UBERON:0002049!5.23e-08!79;UBERON:0007798!5.23e-08!79;UBERON:0001009!7.14e-08!113;UBERON:0000914!1.20e-07!83;UBERON:0002329!1.20e-07!83;UBERON:0003077!1.20e-07!83;UBERON:0003059!1.20e-07!83;UBERON:0007282!1.20e-07!83;UBERON:0009618!1.20e-07!83;UBERON:0007285!1.20e-07!83;UBERON:0005631!1.21e-07!14;UBERON:0000158!1.21e-07!14;UBERON:0004290!2.73e-07!70;UBERON:0000948!9.21e-07!24;UBERON:0005498!9.21e-07!24;UBERON:0004140!9.21e-07!24;UBERON:0009881!9.21e-07!24;UBERON:0004141!9.21e-07!24;UBERON:0003084!9.21e-07!24;UBERON:0007005!9.21e-07!24;UBERON:0004139!9.21e-07!24;UBERON:0004291!9.21e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.32e-11;24!UBERON:0003104;1.42e-10;7!UBERON:0009142;1.42e-10;7!UBERON:0003422;2.67e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0000478;4.32e-11;24!UBERON:0003104;1.42e-10;7!UBERON:0009142;1.42e-10;7!UBERON:0003422;2.67e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,2.84e-11,24;UBERON:0003422,3.10e-09,6;UBERON:0005631,1.11e-07,14;UBERON:0000158,1.11e-07,14;UBERON:0002384,3.00e-07,371 | |||
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| ||
|short_description=p11@COL5A1 | |short_description=p11@COL5A1 | ||
}} | }} |
Latest revision as of 08:59, 16 September 2015
Short description: | p11@COL5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_COL5A1_5end |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | 0bp_to_AB209864_5end |
EntrezGene: | COL5A1 |
HGNC: | 2209 |
UniProt: | Q59EE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.06e-15 | 19 |
fibroblast | 1.05e-11 | 76 |
mesenchymal stem cell of umbilical cord | 3.10e-09 | 6 |
multi fate stem cell | 3.77e-08 | 427 |
somatic stem cell | 1.00e-07 | 433 |
stem cell | 3.49e-07 | 441 |
connective tissue cell | 3.82e-07 | 361 |
mesenchymal stem cell of adipose | 6.26e-07 | 8 |
mesenchymal cell | 6.85e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 2.84e-11 | 24 |
mesenchyme of umbilical cord | 3.10e-09 | 6 |
extraembryonic membrane | 1.11e-07 | 14 |
membranous layer | 1.11e-07 | 14 |
connective tissue | 3.00e-07 | 371 |