FFCP PHASE1:Hg19::chrX:136648554..136648576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7547 | |EntrezGene=7547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12874 | |HGNC=12874 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JY75 | |UniProt=Q5JY75 | ||
|association_with_transcript=-100bp_to_ENST00000370606_5end | |association_with_transcript=-100bp_to_ENST00000370606_5end | ||
|cluster_id=chrX:136648554..136648576,+ | |||
|coexpression_cluster_id=C232 | |coexpression_cluster_id=C232 | ||
|description=CAGE_peak_4_at_ZIC3_5end | |description=CAGE_peak_4_at_ZIC3_5end | ||
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|ontology_enrichment_celltype=CL:0002322!1.39e-14!5;CL:0000047!1.80e-11!8;CL:0000540!5.96e-11!6;CL:0000031!5.96e-11!6;CL:0000404!5.96e-11!6;CL:0000133!9.22e-11!59;CL:0000064!1.52e-08!3;CL:0005012!1.52e-08!3;CL:0000067!1.52e-08!3;CL:0002304!1.52e-08!3;CL:0002603!1.56e-08!3;CL:0000221!3.28e-08!71;CL:0000708!6.04e-08!3;CL:0002319!1.36e-07!25 | |ontology_enrichment_celltype=CL:0002322!1.39e-14!5;CL:0000047!1.80e-11!8;CL:0000540!5.96e-11!6;CL:0000031!5.96e-11!6;CL:0000404!5.96e-11!6;CL:0000133!9.22e-11!59;CL:0000064!1.52e-08!3;CL:0005012!1.52e-08!3;CL:0000067!1.52e-08!3;CL:0002304!1.52e-08!3;CL:0002603!1.56e-08!3;CL:0000221!3.28e-08!71;CL:0000708!6.04e-08!3;CL:0002319!1.36e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.56e-34;5!CL:0002321;1.30e-21;15!CL:0000039;8.93e-16;7!CL:0000586;8.93e-16;7!CL:0000540;1.14e-10;6!CL:0000404;1.14e-10;6!CL:0002603;1.34e-09;3!CL:0000075;1.85e-08;27!CL:0002319;2.64e-08;25!CL:0000306;1.51e-07;4!CL:0002222;1.51e-07;4!CL:0002224;1.51e-07;4 | |ontology_enrichment_celltype_v019=CL:0002322;1.56e-34;5!CL:0002321;1.30e-21;15!CL:0000039;8.93e-16;7!CL:0000586;8.93e-16;7!CL:0000540;1.14e-10;6!CL:0000404;1.14e-10;6!CL:0002603;1.34e-09;3!CL:0000075;1.85e-08;27!CL:0002319;2.64e-08;25!CL:0000306;1.51e-07;4!CL:0002222;1.51e-07;4!CL:0002224;1.51e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.41e-34,5;CL:0000133,5.83e-16,59;CL:0000039,9.11e-16,7;CL:0000586,9.11e-16,7;CL:0000047,1.67e-13,8;CL:0000221,1.01e-12,72;CL:0000540,1.10e-10,6;CL:0000031,1.10e-10,6;CL:0000404,1.10e-10,6;CL:0002603,1.17e-09,3;CL:0000333,7.38e-09,41;CL:0000075,1.63e-08,27;CL:0002319,2.64e-08,25;CL:0000306,1.44e-07,4;CL:0002222,1.44e-07,4;CL:0002224,1.44e-07,4;CL:0000148,9.64e-07,10;CL:0000541,9.64e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.27e-17;10!UBERON:0005564;5.27e-17;10!CL:0000031;1.14e-10;6!CL:0000133;9.14e-09;59!UBERON:0005425;8.12e-08;1 | |ontology_enrichment_development_v019=UBERON:0009117;5.27e-17;10!UBERON:0005564;5.27e-17;10!CL:0000031;1.14e-10;6!CL:0000133;9.14e-09;59!UBERON:0005425;8.12e-08;1 | ||
|ontology_enrichment_disease=DOID:3095!9.01e-11!22;DOID:2994!9.01e-11!22 | |ontology_enrichment_disease=DOID:3095!9.01e-11!22;DOID:2994!9.01e-11!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.04e-23;22!DOID:2994;1.04e-23;22 | |ontology_enrichment_disease_v019=DOID:3095;1.04e-23;22!DOID:2994;1.04e-23;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,9.27e-24,22;DOID:2994,9.27e-24,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.84e-56!94;UBERON:0001016!6.84e-56!94;UBERON:0001017!6.92e-55!82;UBERON:0005743!1.97e-54!86;UBERON:0002616!1.73e-48!59;UBERON:0003075!9.60e-48!86;UBERON:0007284!9.60e-48!86;UBERON:0001049!1.57e-47!57;UBERON:0005068!1.57e-47!57;UBERON:0006241!1.57e-47!57;UBERON:0007135!1.57e-47!57;UBERON:0002346!2.17e-47!90;UBERON:0000955!5.11e-44!69;UBERON:0006238!5.11e-44!69;UBERON:0000924!7.00e-38!173;UBERON:0006601!7.00e-38!173;UBERON:0004121!1.61e-37!169;UBERON:0003056!3.02e-36!61;UBERON:0000033!2.50e-34!123;UBERON:0000153!3.72e-32!129;UBERON:0007811!3.72e-32!129;UBERON:0002780!1.75e-31!41;UBERON:0001890!1.75e-31!41;UBERON:0006240!1.75e-31!41;UBERON:0003080!1.40e-30!42;UBERON:0002020!1.94e-27!34;UBERON:0003528!1.94e-27!34;UBERON:0001893!3.79e-27!34;UBERON:0002791!1.49e-25!33;UBERON:0001869!1.41e-23!32;UBERON:0004732!1.24e-21!13;UBERON:0002619!8.06e-20!22;UBERON:0004733!2.40e-19!12;UBERON:0002028!2.40e-19!12;UBERON:0007277!2.40e-19!12;UBERON:0007023!9.94e-19!115;UBERON:0003076!3.13e-18!15;UBERON:0003057!3.13e-18!15;UBERON:0000956!4.24e-17!25;UBERON:0000203!4.24e-17!25;UBERON:0002680!4.63e-17!9;UBERON:0001895!4.63e-17!9;UBERON:0010092!4.63e-17!9;UBERON:0001950!2.87e-16!20;UBERON:0002420!1.68e-12!9;UBERON:0007245!1.68e-12!9;UBERON:0010009!1.68e-12!9;UBERON:0010011!1.68e-12!9;UBERON:0000454!1.68e-12!9;UBERON:0002308!1.87e-12!9;UBERON:0000125!1.87e-12!9;UBERON:0000349!5.88e-12!5;UBERON:0002037!5.15e-11!6;UBERON:0006215!5.15e-11!6;UBERON:0007625!1.08e-10!11;UBERON:0002298!1.27e-10!8;UBERON:0000488!1.49e-10!4;UBERON:0000200!7.87e-10!6;UBERON:0000064!7.22e-09!219;UBERON:0009663!1.52e-08!7;UBERON:0001778!1.52e-08!3;UBERON:0001775!1.52e-08!3;UBERON:0002104!2.04e-08!21;UBERON:0006331!3.09e-08!3;UBERON:0001801!3.71e-08!14;UBERON:0003210!6.04e-08!3;UBERON:0001872!7.52e-08!5;UBERON:0000988!8.71e-08!3;UBERON:0002200!8.97e-08!11;UBERON:0006876!8.97e-08!11;UBERON:0000119!1.37e-07!312;UBERON:0001871!1.84e-07!7;UBERON:0000025!1.86e-07!194;UBERON:0000019!1.89e-07!19;UBERON:0000047!1.89e-07!19;UBERON:0004088!1.89e-07!19;UBERON:0003072!1.89e-07!19;UBERON:0003071!1.89e-07!19;UBERON:0004128!1.89e-07!19;UBERON:0001032!3.83e-07!24;UBERON:0004456!3.83e-07!24;UBERON:0002203!5.06e-07!6;UBERON:0001768!5.06e-07!6;UBERON:0000970!5.24e-07!20 | |ontology_enrichment_uberon=UBERON:0000073!6.84e-56!94;UBERON:0001016!6.84e-56!94;UBERON:0001017!6.92e-55!82;UBERON:0005743!1.97e-54!86;UBERON:0002616!1.73e-48!59;UBERON:0003075!9.60e-48!86;UBERON:0007284!9.60e-48!86;UBERON:0001049!1.57e-47!57;UBERON:0005068!1.57e-47!57;UBERON:0006241!1.57e-47!57;UBERON:0007135!1.57e-47!57;UBERON:0002346!2.17e-47!90;UBERON:0000955!5.11e-44!69;UBERON:0006238!5.11e-44!69;UBERON:0000924!7.00e-38!173;UBERON:0006601!7.00e-38!173;UBERON:0004121!1.61e-37!169;UBERON:0003056!3.02e-36!61;UBERON:0000033!2.50e-34!123;UBERON:0000153!3.72e-32!129;UBERON:0007811!3.72e-32!129;UBERON:0002780!1.75e-31!41;UBERON:0001890!1.75e-31!41;UBERON:0006240!1.75e-31!41;UBERON:0003080!1.40e-30!42;UBERON:0002020!1.94e-27!34;UBERON:0003528!1.94e-27!34;UBERON:0001893!3.79e-27!34;UBERON:0002791!1.49e-25!33;UBERON:0001869!1.41e-23!32;UBERON:0004732!1.24e-21!13;UBERON:0002619!8.06e-20!22;UBERON:0004733!2.40e-19!12;UBERON:0002028!2.40e-19!12;UBERON:0007277!2.40e-19!12;UBERON:0007023!9.94e-19!115;UBERON:0003076!3.13e-18!15;UBERON:0003057!3.13e-18!15;UBERON:0000956!4.24e-17!25;UBERON:0000203!4.24e-17!25;UBERON:0002680!4.63e-17!9;UBERON:0001895!4.63e-17!9;UBERON:0010092!4.63e-17!9;UBERON:0001950!2.87e-16!20;UBERON:0002420!1.68e-12!9;UBERON:0007245!1.68e-12!9;UBERON:0010009!1.68e-12!9;UBERON:0010011!1.68e-12!9;UBERON:0000454!1.68e-12!9;UBERON:0002308!1.87e-12!9;UBERON:0000125!1.87e-12!9;UBERON:0000349!5.88e-12!5;UBERON:0002037!5.15e-11!6;UBERON:0006215!5.15e-11!6;UBERON:0007625!1.08e-10!11;UBERON:0002298!1.27e-10!8;UBERON:0000488!1.49e-10!4;UBERON:0000200!7.87e-10!6;UBERON:0000064!7.22e-09!219;UBERON:0009663!1.52e-08!7;UBERON:0001778!1.52e-08!3;UBERON:0001775!1.52e-08!3;UBERON:0002104!2.04e-08!21;UBERON:0006331!3.09e-08!3;UBERON:0001801!3.71e-08!14;UBERON:0003210!6.04e-08!3;UBERON:0001872!7.52e-08!5;UBERON:0000988!8.71e-08!3;UBERON:0002200!8.97e-08!11;UBERON:0006876!8.97e-08!11;UBERON:0000119!1.37e-07!312;UBERON:0001871!1.84e-07!7;UBERON:0000025!1.86e-07!194;UBERON:0000019!1.89e-07!19;UBERON:0000047!1.89e-07!19;UBERON:0004088!1.89e-07!19;UBERON:0003072!1.89e-07!19;UBERON:0003071!1.89e-07!19;UBERON:0004128!1.89e-07!19;UBERON:0001032!3.83e-07!24;UBERON:0004456!3.83e-07!24;UBERON:0002203!5.06e-07!6;UBERON:0001768!5.06e-07!6;UBERON:0000970!5.24e-07!20 | ||
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| ||
|short_description=p4@ZIC3 | |short_description=p4@ZIC3 | ||
}} | }} |
Latest revision as of 15:50, 19 September 2015
Short description: | p4@ZIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZIC3_5end |
Coexpression cluster: | C232_teratocarcinoma_HES3GFP_H9_iPS_testicular_neuroblastoma_cerebellum |
Association with transcript: | -100bp_to_ENST00000370606_5end |
EntrezGene: | ZIC3 |
HGNC: | 12874 |
UniProt: | Q5JY75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.41e-34 | 5 |
neurectodermal cell | 5.83e-16 | 59 |
germ line cell | 9.11e-16 | 7 |
germ cell | 9.11e-16 | 7 |
neuronal stem cell | 1.67e-13 | 8 |
ectodermal cell | 1.01e-12 | 72 |
neuron | 1.10e-10 | 6 |
neuroblast | 1.10e-10 | 6 |
electrically signaling cell | 1.10e-10 | 6 |
astrocyte of the cerebellum | 1.17e-09 | 3 |
migratory neural crest cell | 7.38e-09 | 41 |
columnar/cuboidal epithelial cell | 1.63e-08 | 27 |
neural cell | 2.64e-08 | 25 |
crystallin accumulating cell | 1.44e-07 | 4 |
vertebrate lens cell | 1.44e-07 | 4 |
lens epithelial cell | 1.44e-07 | 4 |
melanocyte | 9.64e-07 | 10 |
melanoblast | 9.64e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.27e-24 | 22 |
germ cell cancer | 9.27e-24 | 22 |