FFCP PHASE1:Hg19::chr13:113548643..113548708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23263 | |EntrezGene=23263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14576 | |HGNC=14576 | ||
|TSSclassifier=strong | |||
|UniProt=O15068 | |UniProt=O15068 | ||
|association_with_transcript=0bp_to_ENST00000375608_5end | |association_with_transcript=0bp_to_ENST00000375608_5end | ||
|cluster_id=chr13:113548643..113548708,+ | |||
|description=CAGE_peak_3_at_MCF2L_5end | |description=CAGE_peak_3_at_MCF2L_5end | ||
|id=chr13:113548643..113548708,+ | |id=chr13:113548643..113548708,+ | ||
|ontology_enrichment_celltype=CL:1000497!1.12e-07!18;CL:0002518!1.12e-07!18;CL:1000449!4.21e-07!16;CL:1000507!4.44e-07!12;CL:1000494!4.44e-07!12 | |ontology_enrichment_celltype=CL:1000497!1.12e-07!18;CL:0002518!1.12e-07!18;CL:1000449!4.21e-07!16;CL:1000507!4.44e-07!12;CL:1000494!4.44e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.51e-11;10!CL:1000494;1.51e-11;10!CL:1000449;2.52e-09;15!CL:1000497;5.31e-09;17!CL:0002518;5.31e-09;17 | |ontology_enrichment_celltype_v019=CL:1000507;1.51e-11;10!CL:1000494;1.51e-11;10!CL:1000449;2.52e-09;15!CL:1000497;5.31e-09;17!CL:0002518;5.31e-09;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.66e-11,10;CL:1000494,1.66e-11,10;CL:1000449,2.99e-09,15;CL:1000497,6.15e-09,17;CL:0002518,6.15e-09,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!3.32e-10!143;DOID:305!5.24e-09!106;DOID:299!6.61e-07!25 | |ontology_enrichment_disease=DOID:0050687!3.32e-10!143;DOID:305!5.24e-09!106;DOID:299!6.61e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.04e-07;22!DOID:2994;4.04e-07;22 | |ontology_enrichment_disease_v019=DOID:3095;4.04e-07;22!DOID:2994;4.04e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.36e-08,143;DOID:305,6.17e-08,106;DOID:3095,3.71e-07,22;DOID:2994,3.71e-07,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;1.51e-11;10!UBERON:0009773;1.51e-11;10!UBERON:0001231;1.51e-11;10!UBERON:0004810;1.51e-11;10!UBERON:0000922;3.03e-11;49!UBERON:0002113;7.90e-10;24!UBERON:0011143;7.90e-10;24!UBERON:0006555;2.52e-09;15!UBERON:0004819;2.52e-09;15!UBERON:0001285;2.52e-09;15!UBERON:0007684;2.52e-09;15!UBERON:0000489;3.31e-09;29!UBERON:0004732;2.21e-07;13!UBERON:0004733;6.73e-07;12!UBERON:0002028;6.73e-07;12!UBERON:0006554;7.18e-07;30!UBERON:0001008;7.18e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.51e-11;10!UBERON:0009773;1.51e-11;10!UBERON:0001231;1.51e-11;10!UBERON:0004810;1.51e-11;10!UBERON:0000922;3.03e-11;49!UBERON:0002113;7.90e-10;24!UBERON:0011143;7.90e-10;24!UBERON:0006555;2.52e-09;15!UBERON:0004819;2.52e-09;15!UBERON:0001285;2.52e-09;15!UBERON:0007684;2.52e-09;15!UBERON:0000489;3.31e-09;29!UBERON:0004732;2.21e-07;13!UBERON:0004733;6.73e-07;12!UBERON:0002028;6.73e-07;12!UBERON:0006554;7.18e-07;30!UBERON:0001008;7.18e-07;30 | ||
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| ||
|short_description=p3@MCF2L | |short_description=p3@MCF2L | ||
}} | }} |
Latest revision as of 14:50, 16 September 2015
Short description: | p3@MCF2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MCF2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375608_5end |
EntrezGene: | MCF2L |
HGNC: | 14576 |
UniProt: | O15068 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.66e-11 | 10 |
nephron tubule epithelial cell | 1.66e-11 | 10 |
epithelial cell of nephron | 2.99e-09 | 15 |
kidney cell | 6.15e-09 | 17 |
kidney epithelial cell | 6.15e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.36e-08 | 143 |
carcinoma | 6.17e-08 | 106 |
germ cell and embryonal cancer | 3.71e-07 | 22 |
germ cell cancer | 3.71e-07 | 22 |