FFCP PHASE1:Hg19::chr13:80055462..80055478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54602 | |EntrezGene=54602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18537 | |HGNC=18537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-109bp_to_ENST00000487865_5end | |association_with_transcript=-109bp_to_ENST00000487865_5end | ||
|cluster_id=chr13:80055462..80055478,+ | |||
|coexpression_cluster_id=C2272 | |coexpression_cluster_id=C2272 | ||
|description=CAGE_peak_6_at_NDFIP2_5end | |description=CAGE_peak_6_at_NDFIP2_5end | ||
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|ontology_enrichment_celltype=CL:0002251!1.81e-09!21;CL:0002076!3.03e-09!43;CL:0000223!6.66e-09!59 | |ontology_enrichment_celltype=CL:0002251!1.81e-09!21;CL:0002076!3.03e-09!43;CL:0000223!6.66e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002251;3.66e-10;20!CL:0002076;1.49e-07;42 | |ontology_enrichment_celltype_v019=CL:0002251;3.66e-10;20!CL:0002076;1.49e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002251,3.76e-10,20;CL:0002076,3.02e-09,42;CL:0000223,6.16e-09,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!6.62e-09!143;DOID:305!3.08e-08!106 | |ontology_enrichment_disease=DOID:0050687!6.62e-09!143;DOID:305!3.08e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.58e-07,106;DOID:0050687,7.56e-07,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.51e-12;34!UBERON:0002780;6.43e-12;41!UBERON:0001890;6.43e-12;41!UBERON:0001869;9.94e-12;32!UBERON:0002791;2.68e-11;32!UBERON:0003528;5.82e-11;34!UBERON:0002020;5.82e-11;34!UBERON:0002619;7.28e-11;22!UBERON:0001950;3.29e-10;20!UBERON:0000956;5.36e-10;25!UBERON:0000203;5.36e-10;25!UBERON:0000073;4.47e-09;53!UBERON:0002616;4.47e-09;53!UBERON:0001017;6.78e-08;75!UBERON:0000955;1.33e-07;68!UBERON:0000344;3.37e-07;20!UBERON:0005409;5.49e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001893;2.51e-12;34!UBERON:0002780;6.43e-12;41!UBERON:0001890;6.43e-12;41!UBERON:0001869;9.94e-12;32!UBERON:0002791;2.68e-11;32!UBERON:0003528;5.82e-11;34!UBERON:0002020;5.82e-11;34!UBERON:0002619;7.28e-11;22!UBERON:0001950;3.29e-10;20!UBERON:0000956;5.36e-10;25!UBERON:0000203;5.36e-10;25!UBERON:0000073;4.47e-09;53!UBERON:0002616;4.47e-09;53!UBERON:0001017;6.78e-08;75!UBERON:0000955;1.33e-07;68!UBERON:0000344;3.37e-07;20!UBERON:0005409;5.49e-07;22 | ||
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| ||
|short_description=p6@NDFIP2 | |short_description=p6@NDFIP2 | ||
}} | }} |
Latest revision as of 02:29, 18 September 2015
Short description: | p6@NDFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NDFIP2_5end |
Coexpression cluster: | C2272_amniotic_chorionic_oral_glassy_colon_epidermoid_Mallassezderived |
Association with transcript: | -109bp_to_ENST00000487865_5end |
EntrezGene: | NDFIP2 |
HGNC: | 18537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 3.76e-10 | 20 |
endo-epithelial cell | 3.02e-09 | 42 |
endodermal cell | 6.16e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.58e-07 | 106 |
cell type cancer | 7.56e-07 | 143 |