FFCP PHASE1:Hg19::chr16:3014269..3014283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79412 | |EntrezGene=79412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18797 | |HGNC=18797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000319500_5end | |association_with_transcript=-29bp_to_ENST00000319500_5end | ||
|cluster_id=chr16:3014269..3014283,+ | |||
|description=CAGE_peak_1_at_KREMEN2_5end | |description=CAGE_peak_1_at_KREMEN2_5end | ||
|id=chr16:3014269..3014283,+ | |id=chr16:3014269..3014283,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.77e-31!254;CL:0002076!1.72e-16!43;CL:0000223!2.35e-15!59;CL:0002368!5.60e-10!13;CL:0002077!9.15e-08!33;CL:0000082!2.28e-07!19;CL:0002202!4.05e-07!9;CL:0002632!4.05e-07!9;CL:0002159!7.14e-07!13;CL:0002251!9.88e-07!21 | |ontology_enrichment_celltype=CL:0000066!2.77e-31!254;CL:0002076!1.72e-16!43;CL:0000223!2.35e-15!59;CL:0002368!5.60e-10!13;CL:0002077!9.15e-08!33;CL:0000082!2.28e-07!19;CL:0002202!4.05e-07!9;CL:0002632!4.05e-07!9;CL:0002159!7.14e-07!13;CL:0002251!9.88e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.89e-12;42!CL:0002368;3.58e-11;13!CL:0002202;3.77e-08;9!CL:0002632;3.77e-08;9!CL:0002159;4.37e-07;14 | |ontology_enrichment_celltype_v019=CL:0002076;1.89e-12;42!CL:0002368;3.58e-11;13!CL:0002202;3.77e-08;9!CL:0002632;3.77e-08;9!CL:0002159;4.37e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.94e-15,42;CL:0000066,2.61e-14,253;CL:0000223,1.11e-12,58;CL:0002368,3.44e-11,13;CL:0002202,3.93e-08,9;CL:0002632,3.93e-08,9;CL:0002159,3.95e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;1.21e-07;58 | |ontology_enrichment_development_v019=CL:0000223;1.21e-07;58 | ||
|ontology_enrichment_disease=DOID:162!7.77e-31!235;DOID:14566!3.11e-29!239;DOID:305!1.56e-25!106;DOID:0050687!2.54e-25!143;DOID:0050686!2.51e-13!137;DOID:1749!3.21e-09!14;DOID:7!3.37e-07!39 | |ontology_enrichment_disease=DOID:162!7.77e-31!235;DOID:14566!3.11e-29!239;DOID:305!1.56e-25!106;DOID:0050687!2.54e-25!143;DOID:0050686!2.51e-13!137;DOID:1749!3.21e-09!14;DOID:7!3.37e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.00e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;3.00e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:162,6.60e-11,235;DOID:14566,2.28e-10,239;DOID:0050687,2.06e-09,143;DOID:305,2.13e-08,106;DOID:1749,3.28e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.94e-08!169;UBERON:0000925!1.94e-08!169;UBERON:0006595!1.94e-08!169;UBERON:0004807!3.14e-08!28;UBERON:0000065!7.95e-08!53;UBERON:0001004!9.04e-08!72;UBERON:0004802!2.28e-07!19;UBERON:0000115!2.28e-07!19;UBERON:0005911!2.51e-07!82;UBERON:0001041!4.64e-07!98;UBERON:0000072!6.85e-07!46;UBERON:0001007!8.00e-07!155;UBERON:0001555!8.00e-07!155;UBERON:0007026!8.00e-07!155;UBERON:0005177!8.45e-07!107 | |ontology_enrichment_uberon=UBERON:0004119!1.94e-08!169;UBERON:0000925!1.94e-08!169;UBERON:0006595!1.94e-08!169;UBERON:0004807!3.14e-08!28;UBERON:0000065!7.95e-08!53;UBERON:0001004!9.04e-08!72;UBERON:0004802!2.28e-07!19;UBERON:0000115!2.28e-07!19;UBERON:0005911!2.51e-07!82;UBERON:0001041!4.64e-07!98;UBERON:0000072!6.85e-07!46;UBERON:0001007!8.00e-07!155;UBERON:0001555!8.00e-07!155;UBERON:0007026!8.00e-07!155;UBERON:0005177!8.45e-07!107 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,1.64201178899891,2.04648031415566,0,0,0,0.919421224478927,1.50602959389125,1.84877005083394,1.78174561334694,9.52533857665724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,10.9288586487763,8.15725774125745,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,2.18196896472668,2.00763216772303,1.46368447355514,0.530119073285941,0.464775771478074,3.10983165046111,1.7662459561294,2.55484151353081,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,2.94017422771084,0,0,0,0.882926198829301,1.10689594688802,0,3.29250856225877,0,2.11110842064425,13.8882667737794,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0.790204397959275,3.43394464837949,0,0,0,1.87467667973554,0.335964256397719,1.13420077793909,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0.444485260045183,0.381988425558278,0,0,0.308482478109971,10.2116639666932,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,1.20303882181971,0.276242966807689,0,0,0,0.902399225814824,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0,0,0,2.16757150035082,5.01689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,1.72279661398852,3.90036147621913,0,1.35339005608971,0.308097234229289,0.15350367472613,1.51620229732984,0,0.290033387828457,0.340906509664404,14.9573819886519,1.65284915360978,2.11409074101617,5.99779748724545,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,2.30933070541229,1.34060455107157,3.26672954583968,0,0.43050537267123,3.36942951335251,3.99087138183008,1.60806380144872,0,0,0,0,0,0,0,0,6.51626833877586,0,4.41072388765857,7.80373335528019,1.44269212976445,0.142283686696828,0,0.399158742865633,0,0,0,0,0.456469358066384,0.313359791546046,0,0,0,0,0.425846237690326,1.37402137902306,0.307240764308458,1.78940886313933,0.667396566847634,3.12620952643264,0,0,0,0,0,1.30998378285754,0,7.76707339196886,0,1.70481688083848,0,0,0,0,0,0,0.329607748453519,0.211125408127993,0,0.552567831062295,0,0.102268682502155,0.984678443688556,0,0,0.179021174675609,0,0,0,0,0,0,0,1.82299432759663,15.0431199993457,0,1.2517279311405,1.01701460117107,1.41832609060762,2.06846023944879,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0,1.25481369850743,0,0.113942055847001,0.23056390438806,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,1.57916962432026,1.76456280885966,0.335643173951685,0.569261198172555,0,0.843992258112108,0,0.989471500037586,0.216388639742091,0,0,0,0.889563386041866,2.59484271787656,1.77517314159274,0,0,0,2.55436704901932,1.56531695145672,2.18502341580683,1.18375320854817,0,0,0,0.60129367765797,0.311064574191741,0,0.661983911750998,0,0,1.42304773014896,0.277349346026277,2.08271686002157,1.7638631534588,1.91530254476886,0.17472666824203,6.01951113650658,0.387025325156341,0.219267951258557,0.656923656425674,0.969890164884194,21.8875194194921,0.451961481561065,0.137041924646751,0,0.0633107959558787,0.195551382734803,0.801588202515337,0,1.59847687665704,0.144090417154106,10.3082936549324,0.171594997861965,0,0.124252535565433,1.17847017308398,0.407712618220842,0.523014231561666,0.713987523454252,0,0,0,0,0,0.788662062837943,0,0,0,0.399358000997982,0,0,0,0,1.16495949527454,0.709048640765013,0.329663433524666,0.539228350833479,0.590564889088493,0.846733320657845,0,0.136203406111576,1.12527203925513,1.78801267576404,2.9080823662043,0,0.77380195455795,0.121499113316049,0.335434687599266,0,0.262272940674991,0,0.537862017998534,0.959575986597226,0,0,10.9335471191542,0,0,0,0,0.082092520749339,0,1.35974509824151,0,0,0,0,0,2.81926008926669,0,0,0,0,3.557009374163,3.89736314818867,1.27668251554036,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0.691743174681154,2.12466693535581,1.21319294033318,1.42732666772484,0,0.936669811613763,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.963099152036517,0.214441591374926,6.00286871519987,0,0,0.244736704506468,0.358177682162975,0.617602894321944,0.657852148736121,0.176689145945881,0.578742114812744,0.168942440653073,0,2.41801239211839,0,0,0,0,0,0,0,0,0,0.746842107858986,0,0,0,1.39879507719444,1.86623178009892,0,0.215649622793364,0,0,0,0,0,0.558644917973244,0,1.26178792002005,0,0,0,0,0,0,0,0,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| ||
|short_description=p1@KREMEN2 | |short_description=p1@KREMEN2 | ||
}} | }} |
Latest revision as of 06:53, 16 September 2015
Short description: | p1@KREMEN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KREMEN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000319500_5end |
EntrezGene: | KREMEN2 |
HGNC: | 18797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.94e-15 | 42 |
epithelial cell | 2.61e-14 | 253 |
endodermal cell | 1.11e-12 | 58 |
respiratory epithelial cell | 3.44e-11 | 13 |
epithelial cell of tracheobronchial tree | 3.93e-08 | 9 |
epithelial cell of lower respiratory tract | 3.93e-08 | 9 |
general ecto-epithelial cell | 3.95e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.60e-11 | 235 |
disease of cellular proliferation | 2.28e-10 | 239 |
cell type cancer | 2.06e-09 | 143 |
carcinoma | 2.13e-08 | 106 |
squamous cell carcinoma | 3.28e-08 | 14 |