FFCP PHASE1:Hg19::chr2:97560860..97560872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51252 | |EntrezGene=51252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28036 | |HGNC=28036 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_uc002sxi.3_5end | |association_with_transcript=-4bp_to_uc002sxi.3_5end | ||
|cluster_id=chr2:97560860..97560872,- | |||
|coexpression_cluster_id=C93 | |coexpression_cluster_id=C93 | ||
|description=CAGE_peak_3_at_FAM178B_5end | |description=CAGE_peak_3_at_FAM178B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!7.44e-22!2;CL:0000765!7.44e-22!2;CL:0000050!7.44e-22!2;CL:0000038!7.44e-22!2;CL:0000558!7.44e-22!2;CL:0000547!7.44e-22!2;CL:0000549!7.44e-22!2;CL:0000550!7.44e-22!2;CL:0000552!7.44e-22!2;CL:0000763!9.93e-10!112;CL:0000049!9.93e-10!112 | |ontology_enrichment_celltype=CL:0000764!7.44e-22!2;CL:0000765!7.44e-22!2;CL:0000050!7.44e-22!2;CL:0000038!7.44e-22!2;CL:0000558!7.44e-22!2;CL:0000547!7.44e-22!2;CL:0000549!7.44e-22!2;CL:0000550!7.44e-22!2;CL:0000552!7.44e-22!2;CL:0000763!9.93e-10!112;CL:0000049!9.93e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.70e-33;2!CL:0000558;2.70e-33;2 | |ontology_enrichment_celltype_v019=CL:0000764;2.70e-33;2!CL:0000558;2.70e-33;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.19e-33,2;CL:0000765,3.19e-33,2;CL:0000050,3.19e-33,2;CL:0000038,3.19e-33,2;CL:0000558,3.19e-33,2;CL:0000547,3.19e-33,2;CL:0000549,3.19e-33,2;CL:0000550,3.19e-33,2;CL:0000552,3.19e-33,2;CL:0000763,1.39e-11,108;CL:0000049,1.39e-11,108;CL:0002032,1.54e-07,161;CL:0000837,1.54e-07,161;CL:0000037,3.43e-07,168;CL:0000988,8.74e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!2.51e-47!8;DOID:8692!1.69e-26!31;DOID:1240!7.65e-21!39;DOID:2531!1.12e-15!51;DOID:0060083!1.12e-15!51;DOID:8552!6.26e-12!1 | |ontology_enrichment_disease=DOID:1036!2.51e-47!8;DOID:8692!1.69e-26!31;DOID:1240!7.65e-21!39;DOID:2531!1.12e-15!51;DOID:0060083!1.12e-15!51;DOID:8552!6.26e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:1036;9.59e-52;8!DOID:8692;5.43e-26;31!DOID:1240;4.46e-18;39!DOID:8552;8.72e-18;1!DOID:2531;2.63e-11;51!DOID:0060083;2.63e-11;51 | |ontology_enrichment_disease_v019=DOID:1036;9.59e-52;8!DOID:8692;5.43e-26;31!DOID:1240;4.46e-18;39!DOID:8552;8.72e-18;1!DOID:2531;2.63e-11;51!DOID:0060083;2.63e-11;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,8.63e-52,8;DOID:8692,8.25e-26,31;DOID:1240,1.84e-20,39;DOID:8552,1.03e-17,1;DOID:2531,1.42e-15,51;DOID:0060083,1.42e-15,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.39e-07!7 | |ontology_enrichment_uberon=UBERON:0004177!6.39e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.62e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002106;8.62e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.15e-07,3;UBERON:0004854,8.15e-07,3;UBERON:0009034,8.15e-07,3;UBERON:0002095,8.15e-07,3;UBERON:0004782,8.15e-07,3;UBERON:0003281,8.15e-07,3;UBERON:0009664,8.15e-07,3;UBERON:0002296,8.15e-07,3;UBERON:0005602,8.15e-07,3;UBERON:0001179,8.15e-07,3;UBERON:0006293,8.15e-07,3 | |||
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|short_description=p3@FAM178B | |short_description=p3@FAM178B | ||
}} | }} |
Latest revision as of 02:09, 19 September 2015
Short description: | p3@FAM178B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM178B_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | -4bp_to_uc002sxi.3_5end |
EntrezGene: | FAM178B |
HGNC: | 28036 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.19e-33 | 2 |
erythroblast | 3.19e-33 | 2 |
megakaryocyte-erythroid progenitor cell | 3.19e-33 | 2 |
erythroid progenitor cell | 3.19e-33 | 2 |
reticulocyte | 3.19e-33 | 2 |
proerythroblast | 3.19e-33 | 2 |
basophilic erythroblast | 3.19e-33 | 2 |
polychromatophilic erythroblast | 3.19e-33 | 2 |
orthochromatic erythroblast | 3.19e-33 | 2 |
myeloid cell | 1.39e-11 | 108 |
common myeloid progenitor | 1.39e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.54e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-07 | 161 |
hematopoietic stem cell | 3.43e-07 | 168 |
hematopoietic cell | 8.74e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.15e-07 | 3 |
gastrointestinal system mesentery | 8.15e-07 | 3 |
stomach region | 8.15e-07 | 3 |
mesentery | 8.15e-07 | 3 |
gastrointestinal system serosa | 8.15e-07 | 3 |
mesentery of stomach | 8.15e-07 | 3 |
gut mesentery | 8.15e-07 | 3 |
dorsal mesentery | 8.15e-07 | 3 |
dorsal mesogastrium | 8.15e-07 | 3 |
peritoneal cavity | 8.15e-07 | 3 |
spleen primordium | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 8.63e-52 | 8 |
myeloid leukemia | 8.25e-26 | 31 |
leukemia | 1.84e-20 | 39 |
chronic myeloid leukemia | 1.03e-17 | 1 |
hematologic cancer | 1.42e-15 | 51 |
immune system cancer | 1.42e-15 | 51 |