FFCP PHASE1:Hg19::chr4:84114490..84114492,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:84114490..84114492,- | |||
|coexpression_cluster_id=C491 | |coexpression_cluster_id=C491 | ||
|description=CAGE_peak_at_chr4:84114490..84114492,- | |description=CAGE_peak_at_chr4:84114490..84114492,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002615!1.02e-32!3;CL:0000136!9.88e-18!15;CL:0002616!2.93e-12!1;CL:0000325!9.59e-07!39;CL:0000632!9.96e-07!2 | |ontology_enrichment_celltype=CL:0002615!1.02e-32!3;CL:0000136!9.88e-18!15;CL:0002616!2.93e-12!1;CL:0000325!9.59e-07!39;CL:0000632!9.96e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002615;2.83e-66;3!CL:0002616;2.42e-50;1!CL:0000136;5.97e-35;13!CL:0000632;1.03e-17;3 | |ontology_enrichment_celltype_v019=CL:0002615;2.83e-66;3!CL:0002616;2.42e-50;1!CL:0000136;5.97e-35;13!CL:0000632;1.03e-17;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.35e-66,3;CL:0002616,2.42e-50,1;CL:0000136,2.01e-30,15;CL:0000632,9.46e-18,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.02e-21!2;UBERON:0003688!1.06e-16!6;UBERON:0002358!1.06e-16!6;UBERON:0003684!1.06e-16!6;UBERON:0001178!1.06e-16!6;UBERON:0001736!4.53e-12!1;UBERON:0006298!4.53e-12!1;UBERON:0002171!5.05e-12!1;UBERON:0006518!5.05e-12!1;UBERON:0008949!5.05e-12!1;UBERON:0000101!5.05e-12!1;UBERON:0002167!5.05e-12!1;UBERON:0006834!6.26e-12!1;UBERON:0001301!6.97e-12!1;UBERON:0002363!1.19e-11!1;UBERON:0007647!1.19e-11!1;UBERON:0010115!1.19e-11!1;UBERON:0004457!1.27e-08!12;UBERON:0000042!1.27e-08!12;UBERON:0005406!9.44e-07!2 | |ontology_enrichment_uberon=UBERON:0000341!1.02e-21!2;UBERON:0003688!1.06e-16!6;UBERON:0002358!1.06e-16!6;UBERON:0003684!1.06e-16!6;UBERON:0001178!1.06e-16!6;UBERON:0001736!4.53e-12!1;UBERON:0006298!4.53e-12!1;UBERON:0002171!5.05e-12!1;UBERON:0006518!5.05e-12!1;UBERON:0008949!5.05e-12!1;UBERON:0000101!5.05e-12!1;UBERON:0002167!5.05e-12!1;UBERON:0006834!6.26e-12!1;UBERON:0001301!6.97e-12!1;UBERON:0002363!1.19e-11!1;UBERON:0007647!1.19e-11!1;UBERON:0010115!1.19e-11!1;UBERON:0004457!1.27e-08!12;UBERON:0000042!1.27e-08!12;UBERON:0005406!9.44e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.68e-34;6!UBERON:0002358;7.68e-34;6!UBERON:0003684;7.68e-34;6!UBERON:0001178;7.68e-34;6!UBERON:0005406;5.56e-26;2!UBERON:0004457;5.43e-23;9!UBERON:0000042;5.43e-23;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;7.68e-34;6!UBERON:0002358;7.68e-34;6!UBERON:0003684;7.68e-34;6!UBERON:0001178;7.68e-34;6!UBERON:0005406;5.56e-26;2!UBERON:0004457;5.43e-23;9!UBERON:0000042;5.43e-23;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.35e-34,6;UBERON:0002358,8.35e-34,6;UBERON:0003684,8.35e-34,6;UBERON:0001178,8.35e-34,6;UBERON:0005406,5.56e-26,2;UBERON:0004457,1.57e-17,12;UBERON:0000042,1.57e-17,12;UBERON:0002417,2.58e-08,60;UBERON:0000916,2.58e-08,60 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,7.15137751083661,6.97870819280295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,7.15137751083661,6.97870819280295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | ||
|short_description=p@chr4:84114490..84114492,- | |short_description=p@chr4:84114490..84114492,- | ||
}} | }} |
Latest revision as of 07:33, 30 July 2015
Short description: | p@chr4:84114490..84114492, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:84114490..84114492, - |
Coexpression cluster: | C491_Adipocyte_dura_aorta_Preadipocyte_heart_Fibroblast_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.35e-66 | 3 |
perirenal adipocyte cell | 2.42e-50 | 1 |
fat cell | 2.01e-30 | 15 |
hepatic stellate cell | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.35e-34 | 6 |
peritoneum | 8.35e-34 | 6 |
abdominal cavity | 8.35e-34 | 6 |
visceral peritoneum | 8.35e-34 | 6 |
perirenal fat | 5.56e-26 | 2 |
cavity lining | 1.57e-17 | 12 |
serous membrane | 1.57e-17 | 12 |
abdominal segment of trunk | 2.58e-08 | 60 |
abdomen | 2.58e-08 | 60 |