FFCP PHASE1:Hg19::chr13:80055432..80055449,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54602 | |EntrezGene=54602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18537 | |HGNC=18537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-138bp_to_ENST00000487865_5end | |association_with_transcript=-138bp_to_ENST00000487865_5end | ||
|cluster_id=chr13:80055432..80055449,+ | |||
|coexpression_cluster_id=C2272 | |coexpression_cluster_id=C2272 | ||
|description=CAGE_peak_4_at_NDFIP2_5end | |description=CAGE_peak_4_at_NDFIP2_5end | ||
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|ontology_enrichment_celltype=CL:0002076!8.50e-15!43;CL:0000223!1.35e-14!59;CL:0002251!9.63e-11!21;CL:0000066!3.01e-10!254 | |ontology_enrichment_celltype=CL:0002076!8.50e-15!43;CL:0000223!1.35e-14!59;CL:0002251!9.63e-11!21;CL:0000066!3.01e-10!254 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.55e-11;42!CL:0002251;1.54e-10;20 | |ontology_enrichment_celltype_v019=CL:0002076;8.55e-11;42!CL:0002251;1.54e-10;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.00e-15,42;CL:0000223,2.11e-14,58;CL:0002251,1.29e-10,20;CL:0000066,1.96e-09,253;CL:0002159,9.37e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;1.65e-07;58 | |ontology_enrichment_development_v019=CL:0000223;1.65e-07;58 | ||
|ontology_enrichment_disease=DOID:0050687!5.43e-09!143;DOID:305!8.02e-09!106 | |ontology_enrichment_disease=DOID:0050687!5.43e-09!143;DOID:305!8.02e-09!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.06e-08,143;DOID:305,2.40e-08,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;5.26e-11;32!UBERON:0001893;7.40e-11;34!UBERON:0002619;7.98e-11;22!UBERON:0002791;2.59e-10;32!UBERON:0003528;4.76e-10;34!UBERON:0002020;4.76e-10;34!UBERON:0001950;4.87e-10;20!UBERON:0000956;1.47e-09;25!UBERON:0000203;1.47e-09;25!UBERON:0002780;1.55e-08;41!UBERON:0001890;1.55e-08;41!UBERON:0004921;2.23e-07;33!UBERON:0005409;7.16e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001869;5.26e-11;32!UBERON:0001893;7.40e-11;34!UBERON:0002619;7.98e-11;22!UBERON:0002791;2.59e-10;32!UBERON:0003528;4.76e-10;34!UBERON:0002020;4.76e-10;34!UBERON:0001950;4.87e-10;20!UBERON:0000956;1.47e-09;25!UBERON:0000203;1.47e-09;25!UBERON:0002780;1.55e-08;41!UBERON:0001890;1.55e-08;41!UBERON:0004921;2.23e-07;33!UBERON:0005409;7.16e-07;22 | ||
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| ||
|short_description=p4@NDFIP2 | |short_description=p4@NDFIP2 | ||
}} | }} |
Latest revision as of 02:28, 18 September 2015
Short description: | p4@NDFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NDFIP2_5end |
Coexpression cluster: | C2272_amniotic_chorionic_oral_glassy_colon_epidermoid_Mallassezderived |
Association with transcript: | -138bp_to_ENST00000487865_5end |
EntrezGene: | NDFIP2 |
HGNC: | 18537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.00e-15 | 42 |
endodermal cell | 2.11e-14 | 58 |
epithelial cell of alimentary canal | 1.29e-10 | 20 |
epithelial cell | 1.96e-09 | 253 |
general ecto-epithelial cell | 9.37e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.06e-08 | 143 |
carcinoma | 2.40e-08 | 106 |