FFCP PHASE1:Hg19::chr19:51412658..51412666,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9622 | |EntrezGene=9622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6365 | |HGNC=6365 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RU5 | |UniProt=Q96RU5 | ||
|association_with_transcript=3bp_to_uc002pty.1,uc002ptz.1_5end | |association_with_transcript=3bp_to_uc002pty.1,uc002ptz.1_5end | ||
|cluster_id=chr19:51412658..51412666,- | |||
|coexpression_cluster_id=C249 | |coexpression_cluster_id=C249 | ||
|description=CAGE_peak_3_at_KLK4_5end | |description=CAGE_peak_3_at_KLK4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;7.48e-30;1!CL:0000082;5.83e-07;19 | |ontology_enrichment_celltype_v019=CL:0002553;7.48e-30;1!CL:0000082;5.83e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.48e-30,1;CL:0000082,5.66e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.37e-29;1!UBERON:0009847;7.42e-11;3!UBERON:0003353;7.42e-11;3!UBERON:0007123;6.04e-07;5 | |ontology_enrichment_development_v019=UBERON:0006298;2.37e-29;1!UBERON:0009847;7.42e-11;3!UBERON:0003353;7.42e-11;3!UBERON:0007123;6.04e-07;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;2.05e-15;2!DOID:1324;1.42e-08;15!DOID:5409;2.26e-08;4!DOID:0050615;4.26e-08;16 | |ontology_enrichment_disease_v019=DOID:1909;2.05e-15;2!DOID:1324;1.42e-08;15!DOID:5409;2.26e-08;4!DOID:0050615;4.26e-08;16 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,2.74e-15,2;DOID:1324,1.37e-08,15;DOID:5409,2.11e-08,4;DOID:0050615,4.11e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.06e-20!115;UBERON:0002298!4.07e-14!8;UBERON:0000988!1.44e-10!3;UBERON:0001049!7.25e-10!57;UBERON:0005068!7.25e-10!57;UBERON:0006241!7.25e-10!57;UBERON:0007135!7.25e-10!57;UBERON:0003076!1.37e-09!15;UBERON:0003057!1.37e-09!15;UBERON:0004733!5.02e-09!12;UBERON:0002028!5.02e-09!12;UBERON:0007277!5.02e-09!12;UBERON:0002346!9.71e-09!90;UBERON:0004732!2.81e-08!13;UBERON:0002616!4.34e-08!59;UBERON:0005743!4.79e-08!86;UBERON:0002148!6.84e-08!2;UBERON:0009662!6.84e-08!2;UBERON:0003075!3.34e-07!86;UBERON:0007284!3.34e-07!86;UBERON:0000073!6.48e-07!94;UBERON:0001016!6.48e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!4.06e-20!115;UBERON:0002298!4.07e-14!8;UBERON:0000988!1.44e-10!3;UBERON:0001049!7.25e-10!57;UBERON:0005068!7.25e-10!57;UBERON:0006241!7.25e-10!57;UBERON:0007135!7.25e-10!57;UBERON:0003076!1.37e-09!15;UBERON:0003057!1.37e-09!15;UBERON:0004733!5.02e-09!12;UBERON:0002028!5.02e-09!12;UBERON:0007277!5.02e-09!12;UBERON:0002346!9.71e-09!90;UBERON:0004732!2.81e-08!13;UBERON:0002616!4.34e-08!59;UBERON:0005743!4.79e-08!86;UBERON:0002148!6.84e-08!2;UBERON:0009662!6.84e-08!2;UBERON:0003075!3.34e-07!86;UBERON:0007284!3.34e-07!86;UBERON:0000073!6.48e-07!94;UBERON:0001016!6.48e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;2.37e-29;1!UBERON:0001044;9.49e-20;6!UBERON:0003293;9.49e-20;6!UBERON:0003294;9.49e-20;6!UBERON:0010047;9.49e-20;6!UBERON:0003408;9.49e-20;6!UBERON:0000167;9.49e-20;6!UBERON:0001829;2.05e-15;2!UBERON:0001041;4.75e-09;14!UBERON:0004802;5.83e-07;19!UBERON:0000115;5.83e-07;19!UBERON:0002046;6.04e-07;5!UBERON:0000161;6.57e-07;19!UBERON:0000166;6.57e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0001736;2.37e-29;1!UBERON:0001044;9.49e-20;6!UBERON:0003293;9.49e-20;6!UBERON:0003294;9.49e-20;6!UBERON:0010047;9.49e-20;6!UBERON:0003408;9.49e-20;6!UBERON:0000167;9.49e-20;6!UBERON:0001829;2.05e-15;2!UBERON:0001041;4.75e-09;14!UBERON:0004802;5.83e-07;19!UBERON:0000115;5.83e-07;19!UBERON:0002046;6.04e-07;5!UBERON:0000161;6.57e-07;19!UBERON:0000166;6.57e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,2.37e-29,1;UBERON:0006298,2.37e-29,1;UBERON:0001044,1.04e-19,6;UBERON:0003293,1.04e-19,6;UBERON:0003294,1.04e-19,6;UBERON:0010047,1.04e-19,6;UBERON:0000167,1.04e-19,6;UBERON:0001829,2.05e-15,2;UBERON:0003408,2.98e-12,10;UBERON:0002530,3.63e-08,59;UBERON:0000161,8.95e-08,36;UBERON:0005153,1.22e-07,37;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145;UBERON:0002046,5.38e-07,5;UBERON:0004117,5.38e-07,5;UBERON:0007689,5.38e-07,5;UBERON:0007123,5.38e-07,5;UBERON:0003091,5.38e-07,5;UBERON:0004802,5.66e-07,19;UBERON:0000115,5.66e-07,19 | |||
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| ||
|short_description=p3@KLK4 | |short_description=p3@KLK4 | ||
}} | }} |
Latest revision as of 13:20, 19 September 2015
Short description: | p3@KLK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLK4_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 3bp_to_uc002pty.1, uc002ptz.1_5end |
EntrezGene: | KLK4 |
HGNC: | 6365 |
UniProt: | Q96RU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.48e-30 | 1 |
epithelial cell of lung | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 2.37e-29 | 1 |
submandibular gland primordium | 2.37e-29 | 1 |
saliva-secreting gland | 1.04e-19 | 6 |
gland of oral region | 1.04e-19 | 6 |
gland of foregut | 1.04e-19 | 6 |
oral gland | 1.04e-19 | 6 |
oral cavity | 1.04e-19 | 6 |
major salivary gland | 2.05e-15 | 2 |
gland of gut | 2.98e-12 | 10 |
gland | 3.63e-08 | 59 |
orifice | 8.95e-08 | 36 |
epithelial bud | 1.22e-07 | 37 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |
thyroid gland | 5.38e-07 | 5 |
pharyngeal pouch | 5.38e-07 | 5 |
thyroid diverticulum | 5.38e-07 | 5 |
pharyngeal pouch 2 | 5.38e-07 | 5 |
thyroid primordium | 5.38e-07 | 5 |
respiratory tract epithelium | 5.66e-07 | 19 |
lung epithelium | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.74e-15 | 2 |
lung cancer | 1.37e-08 | 15 |
lung small cell carcinoma | 2.11e-08 | 4 |
respiratory system cancer | 4.11e-08 | 16 |