FFCP PHASE1:Hg19::chr1:44878026..44878043,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:44878026..44878043,+
|short_description=p16@RNF220
|description=CAGE_peak_16_at_RNF220_5end
|association_with_transcript=-326bp_to_ENST00000470498_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55182 | |EntrezGene=55182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25552 | |HGNC=25552 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-326bp_to_ENST00000470498_5end | |||
|cluster_id=chr1:44878026..44878043,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_16_at_RNF220_5end | |||
|id=chr1:44878026..44878043,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.51e-14;3!UBERON:0003057;1.51e-14;3!UBERON:0005425;9.08e-12;1!UBERON:0006222;1.52e-11;1!UBERON:0006601;4.33e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.63e-11;1!DOID:1357;3.63e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.44e-11,1;DOID:1357,4.44e-11,1 | |||
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|short_description=p16@RNF220 | |||
}} | }} |
Latest revision as of 06:10, 18 September 2015
Short description: | p16@RNF220 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RNF220_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -326bp_to_ENST00000470498_5end |
EntrezGene: | RNF220 |
HGNC: | 25552 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.44e-11 | 1 |
maxillary sinus cancer | 4.44e-11 | 1 |